Comparison of protein repeat classifications based on structure and sequence families.

abstract：:The biophysical characteristics of vascular tissues are dependent largely on the properties of fibrillar collagens. Considering the predominant structural component, collagen type I, the present review describes the mechanisms of formation and maturation of lysyl oxidase-mediated cross-linking, leading to an understan...

journal_title：Biochemical Society transactions

authors： Robins SP

更新日期：2007-11-01 00:00:00

abstract：:AD (Alzheimer's disease) is a neurodegenerative disease characterized by a gradual loss of neurons and the accumulation of neurotoxic Aβ (amyloid β-peptide) and hyperphosphorylated tau. The discovery of mutations in three genes, PSEN1 (presenilin 1), PSEN2 (presenilin 2) and APP (amyloid precursor protein), in patient...

journal_title：Biochemical Society transactions

authors： Coen K,Annaert W

更新日期：2010-12-01 00:00:00

abstract：:The mitotic spindle is the macromolecular machine utilized to accurately segregate chromosomes in cells. How this self-organized structure assembles is a key aspect of understanding spindle morphogenesis. In the present review, we focus on understanding mechanisms of spindle self-assembly and address how subcellular s...

journal_title：Biochemical Society transactions

authors： Weaver LN,Walczak CE

更新日期：2015-02-01 00:00:00

abstract：:Within the SulfoSYS (Sulfolobus Systems Biology) project, the effect of temperature on a metabolic network is investigated at the systems level. Sulfolobus solfataricus utilizes an unusual branched ED (Entner-Doudoroff) pathway for sugar degradation that is promiscuous for glucose and galactose. In the course of metab...

journal_title：Biochemical Society transactions

authors： Haferkamp P,Kutschki S,Treichel J,Hemeda H,Sewczyk K,Hoffmann D,Zaparty M,Siebers B

更新日期：2011-01-01 00:00:00

abstract：:Although it is now well established that PI3K (phosphoinositide 3-kinase) is a key enzyme in several intracellular processes, there are still relatively few reports that precisely identify the specific isoforms of PI3K actually involved in such events. The lack of specific inhibitors has made it particularly difficult...

journal_title：Biochemical Society transactions

authors： Falasca M,Maffucci T

更新日期：2007-04-01 00:00:00

abstract：:Autophagy is an evolutionarily conserved lysosome-mediated degradation and recycling process, which functions in cellular homeostasis and stress adaptation. The process is highly dynamic and involves autophagosome synthesis, cargo recognition and transport, autophagosome-lysosome fusion, and cargo degradation. The mul...

journal_title：Biochemical Society transactions

authors： Yang KC,Sathiyaseelan P,Ho C,Gorski SM

更新日期：2018-02-19 00:00:00

abstract：:Moonlighting proteins serve one or more novel functions in addition to their canonical roles. Moonlighting functions arise when an adventitious interaction between a protein and a new partner improves fitness of the organism. Selective pressure for improvement in the new function can result in two alternative outcomes...

journal_title：Biochemical Society transactions

authors： Copley SD

更新日期：2014-12-01 00:00:00

abstract：:It is now clear that NSPs (neutrophil serine proteases), including elastase, Pr3 (proteinase 3) and CatG (cathepsin G) are major pathogenic determinants in chronic inflammatory disorders of the lungs. Two unglycosylated natural protease inhibitors, SLPI (secretory leucocyte protease inhibitor) and elafin, and its prec...

journal_title：Biochemical Society transactions

authors： Zani ML,Tanga A,Saidi A,Serrano H,Dallet-Choisy S,Baranger K,Moreau T

更新日期：2011-10-01 00:00:00

abstract：:Tyrosine kinases are signaling molecules that are common to all metazoans and are involved in the regulation of many cellular processes such as proliferation and survival. While most attention has been devoted to tyrosine kinases signaling at the plasma membrane and the cytosol, very little attention has been dedicate...

journal_title：Biochemical Society transactions

authors： Farhan H

更新日期：2020-02-28 00:00:00

abstract：:MNDs (motor neuron diseases) form a heterogeneous group of pathologies characterized by the progressive degeneration of motor neurons. More and more genetic factors associated with MND encode proteins that have a function in RNA metabolism, suggesting that disturbed RNA metabolism could be a common underlying problem ...

journal_title：Biochemical Society transactions

authors： Achsel T,Barabino S,Cozzolino M,Carrì MT

更新日期：2013-12-01 00:00:00

abstract：:Resveratrol (3,4',5-trihydroxystilbene) is found in various plants, including grapes, berries and peanuts. It is also present in wines, especially red wines. During the last years, it has been the focus of numerous in vitro and in vivo studies investigating its biological attributes, which include mainly antioxidant a...

journal_title：Biochemical Society transactions

authors： de la Lastra CA,Villegas I

更新日期：2007-11-01 00:00:00

abstract：:Whereas spontaneous point mutation operates on nucleotides individually, sexual recombination manipulates the set of nucleotides within an allele as an essentially particulate unit. In principle, these two different scales of variation enable selection to follow fitness gradients in two different spaces: in nucleotide...

journal_title：Biochemical Society transactions

authors： Watson RA,Weinreich DM,Wakeley J

更新日期：2006-08-01 00:00:00

abstract：:The 26S proteasome is a non-lysosomal protease in the cytosol and nucleus of eukaryotic cells. Its main function is to mediate ubiquitin-dependent proteolysis. The 26S proteasome is a multimeric complex composed by the 20S proteasome CP (core particle) and the 19S RPs (regulatory particles). Although the atomic struct...

journal_title：Biochemical Society transactions

authors： Matias AC,Ramos PC,Dohmen RJ

更新日期：2010-02-01 00:00:00

abstract：:Rho-family GTPases regulate various aspects of cell function by controlling cytoskeletal changes; however, their spatial regulation within the cells remains largely unknown. To understand this regulation, we have studied the spatiotemporal activity of Rho-family GTPases in migrating cells and growth factor-stimulated ...

journal_title：Biochemical Society transactions

authors： Kurokawa K,Nakamura T,Aoki K,Matsuda M

更新日期：2005-08-01 00:00:00

abstract：:Post-transcriptional gene silencing (PTGS) has been successfully used to modify seed lipids in oilseed crops like soybean, canola and sunflower. Conventionally, PTGS has been induced by transforming the plants with either antisense or co-suppression constructs targeted against key seed lipid biosynthesis genes. A majo...

journal_title：Biochemical Society transactions

authors： Singh S,Green A,Stoutjesdijk P,Liu Q

更新日期：2000-12-01 00:00:00

abstract：:The axial ligand of the catalytic mononuclear T1 copper site (Met(502)) of the CotA laccase was replaced by a leucine or phenylalanine residue to increase the redox potential of the enzyme. These mutations led to an increase in the redox potential by approx. 100 mV relative to the wild-type enzyme but the catalytic co...

journal_title：Biochemical Society transactions

authors： Melo EP,Fernandes AT,Durão P,Martins LO

更新日期：2007-12-01 00:00:00

abstract：:Isolation and purification of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F under aerobic conditions leads to a mixture of two states, Ni-A (unready) and Ni-B (ready). The two states are distinguished by different activation times and different EPR spectra. HYSCORE and ENDOR data and DFT calculations sho...

journal_title：Biochemical Society transactions

authors： van Gastel M,Fichtner C,Neese F,Lubitz W

更新日期：2005-02-01 00:00:00

abstract：:Neutrophils are very abundant, short-lived leucocytes and their death by apoptosis is central to homoeostasis and the resolution of inflammation, yet the trigger for apoptosis is still a topic of debate. Depolarization of the mitochondrial membrane has been supposed to initiate neutrophil spontaneous apoptosis, as neu...

journal_title：Biochemical Society transactions

authors： Scheel-Toellner D,Wang KQ,Webb PR,Wong SH,Craddock R,Assi LK,Salmon M,Lord JM

更新日期：2004-06-01 00:00:00

abstract：:The human prostate expresses very high concentrations of annexins 1, 4, and 5 and secretes high concentrations of annexins 1 and 5. Although the biological roles of these proteins in prostate secretions are not known, these studies emphasize the need to consider extracellular sites for physiological functions of annex...

journal_title：Biochemical Society transactions

authors： Haigler HT,Christmas P

更新日期：1990-12-01 00:00:00

abstract：:Ligand-gated ion channels function as rapid signal transducers, converting chemical signals (in the form of neurotransmitters) into electrical signals in the postsynaptic neuron. This is achieved by the recognition of neurotransmitter at its specific-binding sites, which then triggers the opening of an ion channel ('g...

journal_title：Biochemical Society transactions

authors： Kash TL,Trudell JR,Harrison NL

更新日期：2004-06-01 00:00:00

abstract：:Although Sulfolobus species are among the best studied archaeal micro-organisms, the development and availability of genetic tools has lagged behind. In the present paper, we discuss the latest progress in understanding recombination events of exogenous DNA into the chromosomes of Sulfolobus solfataricus and Sulfolobu...

journal_title：Biochemical Society transactions

authors： Wagner M,Berkner S,Ajon M,Driessen AJ,Lipps G,Albers SV

更新日期：2009-02-01 00:00:00

abstract：:The backbones of proteins form linear chains. In the case of some proteins, these chains can be characterized as forming linear open knots. The knot type of the full chain reveals only limited information about the entanglement of the chain since, for example, subchains of an unknotted protein can form knots and subch...

journal_title：Biochemical Society transactions

authors： Rawdon EJ,Millett KC,Sułkowska JI,Stasiak A

更新日期：2013-04-01 00:00:00

abstract：:Reciprocal biochemical and biophysical interactions between tumor cells, stromal cells and the extracellular matrix (ECM) result in a unique tumor microenvironment that determines disease outcome. The cellular component of the tumor microenvironment contributes to tumor growth by providing nutrients, assisting in the ...

journal_title：Biochemical Society transactions

authors： Johan MZ,Samuel MS

更新日期：2019-02-28 00:00:00

abstract：:Among the several signalling pathways regulated by ubiquitin and ubiquitin-like proteins, the one activating NF-kappaB (nuclear factor kappaB) is certainly one of the best characterized. The regulation of the activity of this transcription factor by members of the ubiquitin family occurs at various levels, imposing ov...

journal_title：Biochemical Society transactions

authors： Lang V,Rodríguez MS

更新日期：2008-10-01 00:00:00

abstract：:Recent studies of some proteins involved in the formation of focal adhesions are described. These include fibronectin, integrins, talin, Dok1 and filamin. Emphasis is placed on features that facilitate regulated assembly of complexes; these include a modular construction and flexible regions that provide interaction s...

journal_title：Biochemical Society transactions

authors： Campbell ID

更新日期：2008-04-01 00:00:00

abstract：:Loss of barrier function in the vasculature promotes inflammatory signalling which in turn contributes to the progression of cardiovascular disease. cAMP can protect against endothelial dysfunction through the effectors PKA (protein kinase A) and Epac (exchange protein directly activated by cAMP). The present review o...

journal_title：Biochemical Society transactions

authors： Parnell E,Yarwood SJ

更新日期：2014-04-01 00:00:00

abstract：:Although the Gompertz formula accurately describes observed mortality distributions over most of their extent, their 'tail' is much longer than that of a Gompertz curve fitted to the whole data set. A simple candidate explanation is that the longest-lived subset of any population will necessarily be enriched in indivi...

journal_title：Biochemical Society transactions

authors： de Grey AD

更新日期：2003-04-01 00:00:00

abstract：:Beta galactosidases (BGALs) are glycosyl hydrolases that remove terminal β-D-galactosyl residues from β-D-galactosides. There are 17 predicted BGAL genes in the genomes of both Arabidopsis (BGAL1-17) and tomato (TBG1-17). All tested BGALs have BGAL activity but their distinct expression profiles and ancient phylogenet...

journal_title：Biochemical Society transactions

authors： Chandrasekar B,van der Hoorn RA

更新日期：2016-02-01 00:00:00

abstract：:Endocytosis of transmembrane receptors largely occurs via clathrin-coated vesicles that bud from the plasma membrane and deliver their cargo to the endosomal system for recycling or degradation. PIs (phosphoinositides) control the timing and localization of endocytic membrane trafficking by recruiting adaptors and oth...

journal_title：Biochemical Society transactions

authors： Haucke V

更新日期：2005-12-01 00:00:00

abstract：:Crystal structure data for Escherichia coli beta-ketoacyl synthase (KAS) I with C(10) and C(12) fatty acid substrates bound in conjunction with results from mutagenizing residues in the active site leads to a model for catalysis. Differences from and similarities to the other Claisen enzymes carrying out decarboxylati...

journal_title：Biochemical Society transactions

authors： von Wettstein-Knowles P,Olsen J,Arnvig Mcguire K,Larsen S

更新日期：2000-12-01 00:00:00