Loss of neuronal 3D chromatin organization causes transcriptional and behavioural deficits related to serotonergic dysfunction.

Abstract:

:The interior of the neuronal cell nucleus is a highly organized three-dimensional (3D) structure where regions of the genome that are linearly millions of bases apart establish sub-structures with specialized functions. To investigate neuronal chromatin organization and dynamics in vivo, we generated bitransgenic mice expressing GFP-tagged histone H2B in principal neurons of the forebrain. Surprisingly, the expression of this chimeric histone in mature neurons caused chromocenter declustering and disrupted the association of heterochromatin with the nuclear lamina. The loss of these structures did not affect neuronal viability but was associated with specific transcriptional and behavioural deficits related to serotonergic dysfunction. Overall, our results demonstrate that the 3D organization of chromatin within neuronal cells provides an additional level of epigenetic regulation of gene expression that critically impacts neuronal function. This in turn suggests that some loci associated with neuropsychiatric disorders may be particularly sensitive to changes in chromatin architecture.

journal_name

Nat Commun

journal_title

Nature communications

authors

Ito S,Magalska A,Alcaraz-Iborra M,Lopez-Atalaya JP,Rovira V,Contreras-Moreira B,Lipinski M,Olivares R,Martinez-Hernandez J,Ruszczycki B,Lujan R,Geijo-Barrientos E,Wilczynski GM,Barco A

doi

10.1038/ncomms5450

subject

Has Abstract

pub_date

2014-07-18 00:00:00

pages

4450

issn

2041-1723

pii

ncomms5450

journal_volume

5

pub_type

杂志文章
  • Land-use emissions play a critical role in land-based mitigation for Paris climate targets.

    abstract::Scenarios that limit global warming to below 2 °C by 2100 assume significant land-use change to support large-scale carbon dioxide (CO2) removal from the atmosphere by afforestation/reforestation, avoided deforestation, and Biomass Energy with Carbon Capture and Storage (BECCS). The more ambitious mitigation scenarios...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-05340-z

    authors: Harper AB,Powell T,Cox PM,House J,Huntingford C,Lenton TM,Sitch S,Burke E,Chadburn SE,Collins WJ,Comyn-Platt E,Daioglou V,Doelman JC,Hayman G,Robertson E,van Vuuren D,Wiltshire A,Webber CP,Bastos A,Boysen L,Ciais

    更新日期:2018-08-07 00:00:00

  • An unforeseen polymorph of coronene by the application of magnetic fields during crystal growth.

    abstract::The continued development of novel drugs, proteins, and advanced materials strongly rely on our ability to self-assemble molecules in solids with the most suitable structure (polymorph) in order to exhibit desired functionalities. The search for new polymorphs remains a scientific challenge, that is at the core of cry...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms11555

    authors: Potticary J,Terry LR,Bell C,Papanikolopoulos AN,Christianen PC,Engelkamp H,Collins AM,Fontanesi C,Kociok-Köhn G,Crampin S,Da Como E,Hall SR

    更新日期:2016-05-10 00:00:00

  • Cooperative ordering of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinker ZapA.

    abstract::During bacterial cell division, the tubulin-homolog FtsZ forms a ring-like structure at the center of the cell. This Z-ring not only organizes the division machinery, but treadmilling of FtsZ filaments was also found to play a key role in distributing proteins at the division site. What regulates the architecture, dyn...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-13702-4

    authors: Caldas P,López-Pelegrín M,Pearce DJG,Budanur NB,Brugués J,Loose M

    更新日期:2019-12-17 00:00:00

  • The Capsaspora genome reveals a complex unicellular prehistory of animals.

    abstract::To reconstruct the evolutionary origin of multicellular animals from their unicellular ancestors, the genome sequences of diverse unicellular relatives are essential. However, only the genome of the choanoflagellate Monosiga brevicollis has been reported to date. Here we completely sequence the genome of the filastere...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3325

    authors: Suga H,Chen Z,de Mendoza A,Sebé-Pedrós A,Brown MW,Kramer E,Carr M,Kerner P,Vervoort M,Sánchez-Pons N,Torruella G,Derelle R,Manning G,Lang BF,Russ C,Haas BJ,Roger AJ,Nusbaum C,Ruiz-Trillo I

    更新日期:2013-01-01 00:00:00

  • Structural insights into chaperone addiction of toxin-antitoxin systems.

    abstract::SecB chaperones assist protein export by binding both unfolded proteins and the SecA motor. Certain SecB homologs can also control toxin-antitoxin (TA) systems known to modulate bacterial growth in response to stress. In such TA-chaperone (TAC) systems, SecB assists the folding and prevents degradation of the antitoxi...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-08747-4

    authors: Guillet V,Bordes P,Bon C,Marcoux J,Gervais V,Sala AJ,Dos Reis S,Slama N,Mares-Mejía I,Cirinesi AM,Maveyraud L,Genevaux P,Mourey L

    更新日期:2019-02-15 00:00:00

  • Optical soliton molecular complexes in a passively mode-locked fibre laser.

    abstract::Ultrashort optical pulses propagating in a dissipative nonlinear system can interact and bind stably, forming optical soliton molecules. Soliton molecules in ultrafast lasers are under intense research focus and present striking analogies with their matter molecules counterparts. The recent development of real-time sp...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-08755-4

    authors: Wang ZQ,Nithyanandan K,Coillet A,Tchofo-Dinda P,Grelu P

    更新日期:2019-02-19 00:00:00

  • Two recipes for repelling hot water.

    abstract::Although a hydrophobic microtexture at a solid surface most often reflects rain owing to the presence of entrapped air within the texture, it is much more challenging to repel hot water. As it contacts a colder material, hot water generates condensation within the cavities at the solid surface, which eventually builds...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-09456-8

    authors: Mouterde T,Lecointre P,Lehoucq G,Checco A,Clanet C,Quéré D

    更新日期:2019-03-29 00:00:00

  • Structural insight into SUMO chain recognition and manipulation by the ubiquitin ligase RNF4.

    abstract::The small ubiquitin-like modifier (SUMO) can form polymeric chains that are important signals in cellular processes such as meiosis, genome maintenance and stress response. The SUMO-targeted ubiquitin ligase RNF4 engages with SUMO chains on linked substrates and catalyses their ubiquitination, which targets substrates...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms5217

    authors: Xu Y,Plechanovová A,Simpson P,Marchant J,Leidecker O,Kraatz S,Hay RT,Matthews SJ

    更新日期:2014-06-27 00:00:00

  • Broadband transparent optical phase change materials for high-performance nonvolatile photonics.

    abstract::Optical phase change materials (O-PCMs), a unique group of materials featuring exceptional optical property contrast upon a solid-state phase transition, have found widespread adoption in photonic applications such as switches, routers and reconfigurable meta-optics. Current O-PCMs, such as Ge-Sb-Te (GST), exhibit lar...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-12196-4

    authors: Zhang Y,Chou JB,Li J,Li H,Du Q,Yadav A,Zhou S,Shalaginov MY,Fang Z,Zhong H,Roberts C,Robinson P,Bohlin B,Ríos C,Lin H,Kang M,Gu T,Warner J,Liberman V,Richardson K,Hu J

    更新日期:2019-09-30 00:00:00

  • Templated growth of oriented layered hybrid perovskites on 3D-like perovskites.

    abstract::The manipulation of crystal orientation from the thermodynamic equilibrium states is desired in layered hybrid perovskite films to direct charge transport and enhance the perovskite devices performance. Here we report a templated growth mechanism of layered perovskites from 3D-like perovskites which can be a general d...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-13856-1

    authors: Wang J,Luo S,Lin Y,Chen Y,Deng Y,Li Z,Meng K,Chen G,Huang T,Xiao S,Huang H,Zhou C,Ding L,He J,Huang J,Yuan Y

    更新日期:2020-01-29 00:00:00

  • Bright monomeric near-infrared fluorescent proteins as tags and biosensors for multiscale imaging.

    abstract::Monomeric near-infrared (NIR) fluorescent proteins (FPs) are in high demand as protein tags and components of biosensors for deep-tissue imaging and multicolour microscopy. We report three bright and spectrally distinct monomeric NIR FPs, termed miRFPs, engineered from bacterial phytochrome, which can be used as easil...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms12405

    authors: Shcherbakova DM,Baloban M,Emelyanov AV,Brenowitz M,Guo P,Verkhusha VV

    更新日期:2016-08-19 00:00:00

  • Properties and dynamics of meron topological spin textures in the two-dimensional magnet CrCl3.

    abstract::Merons are nontrivial topological spin textures highly relevant for many phenomena in solid state physics. Despite their importance, direct observation of such vortex quasiparticles is scarce and has been limited to a few complex materials. Here, we show the emergence of merons and antimerons in recently discovered tw...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-20497-2

    authors: Augustin M,Jenkins S,Evans RFL,Novoselov KS,Santos EJG

    更新日期:2021-01-08 00:00:00

  • A CD47-associated super-enhancer links pro-inflammatory signalling to CD47 upregulation in breast cancer.

    abstract::CD47 is a cell surface molecule that inhibits phagocytosis of cells that express it by binding to its receptor, SIRPα, on macrophages and other immune cells. CD47 is expressed at different levels by neoplastic and normal cells. Here, to reveal mechanisms by which different neoplastic cells generate this dominant 'don'...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms14802

    authors: Betancur PA,Abraham BJ,Yiu YY,Willingham SB,Khameneh F,Zarnegar M,Kuo AH,McKenna K,Kojima Y,Leeper NJ,Ho P,Gip P,Swigut T,Sherwood RI,Clarke MF,Somlo G,Young RA,Weissman IL

    更新日期:2017-04-05 00:00:00

  • Error-mitigated quantum gates exceeding physical fidelities in a trapped-ion system.

    abstract::Various quantum applications can be reduced to estimating expectation values, which are inevitably deviated by operational and environmental errors. Although errors can be tackled by quantum error correction, the overheads are far from being affordable for near-term technologies. To alleviate the detrimental effects o...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-14376-z

    authors: Zhang S,Lu Y,Zhang K,Chen W,Li Y,Zhang JN,Kim K

    更新日期:2020-01-30 00:00:00

  • Genome-wide rare variant analysis for thousands of phenotypes in over 70,000 exomes from two cohorts.

    abstract::Understanding the impact of rare variants is essential to understanding human health. We analyze rare (MAF < 0.1%) variants against 4264 phenotypes in 49,960 exome-sequenced individuals from the UK Biobank and 1934 phenotypes (1821 overlapping with UK Biobank) in 21,866 members of the Healthy Nevada Project (HNP) coho...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-14288-y

    authors: Cirulli ET,White S,Read RW,Elhanan G,Metcalf WJ,Tanudjaja F,Fath DM,Sandoval E,Isaksson M,Schlauch KA,Grzymski JJ,Lu JT,Washington NL

    更新日期:2020-01-28 00:00:00

  • Production of butyrate from lysine and the Amadori product fructoselysine by a human gut commensal.

    abstract::Human intestinal bacteria produce butyrate, which has signalling properties and can be used as energy source by enterocytes thus influencing colonic health. However, the pathways and the identity of bacteria involved in this process remain unclear. Here we describe the isolation from the human intestine of Intestinimo...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms10062

    authors: Bui TP,Ritari J,Boeren S,de Waard P,Plugge CM,de Vos WM

    更新日期:2015-12-01 00:00:00

  • Fourier ring correlation simplifies image restoration in fluorescence microscopy.

    abstract::Fourier ring correlation (FRC) has recently gained popularity among fluorescence microscopists as a straightforward and objective method to measure the effective image resolution. While the knowledge of the numeric resolution value is helpful in e.g., interpreting imaging results, much more practical use can be made o...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-11024-z

    authors: Koho S,Tortarolo G,Castello M,Deguchi T,Diaspro A,Vicidomini G

    更新日期:2019-07-15 00:00:00

  • Breakdown of energy transfer gap laws revealed by full-dimensional quantum scattering between HF molecules.

    abstract::Inelastic collisions involving molecular species are key to energy transfer in gaseous environments. They are commonly governed by an energy gap law, which dictates that transitions are dominated by those between initial and final states with roughly the same ro-vibrational energy. Transitions involving rotational ine...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-12691-8

    authors: Yang D,Huang J,Hu X,Guo H,Xie D

    更新日期:2019-10-11 00:00:00

  • Reconstitution of the complete pathway of ITS2 processing at the pre-ribosome.

    abstract::Removal of internal transcribed spacer 2 (ITS2) from pre-ribosomal RNA is essential to make functional ribosomes. This complicated processing reaction begins with a single endonucleolytic cleavage followed by exonucleolytic trimming at both new cleavage sites to generate mature 5.8S and 25S rRNA. We reconstituted the ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-01786-9

    authors: Fromm L,Falk S,Flemming D,Schuller JM,Thoms M,Conti E,Hurt E

    更新日期:2017-11-27 00:00:00

  • Temporal decorrelation by SK channels enables efficient neural coding and perception of natural stimuli.

    abstract::It is commonly assumed that neural systems efficiently process natural sensory input. However, the mechanisms by which such efficient processing is achieved, and the consequences for perception and behaviour remain poorly understood. Here we show that small conductance calcium-activated potassium (SK) channels enable ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms11353

    authors: Huang CG,Zhang ZD,Chacron MJ

    更新日期:2016-04-18 00:00:00

  • Microtubule-dependent balanced cell contraction and luminal-matrix modification accelerate epithelial tube fusion.

    abstract::Connection of tubules into larger networks is the key process for the development of circulatory systems. In Drosophila development, tip cells of the tracheal system lead the migration of each branch and connect tubules by adhering to each other and simultaneously changing into a torus-shape. We show that as adhesion ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms11141

    authors: Kato K,Dong B,Wada H,Tanaka-Matakatsu M,Yagi Y,Hayashi S

    更新日期:2016-04-12 00:00:00

  • The evolutionary origin of human hyper-cooperation.

    abstract::Proactive, that is, unsolicited, prosociality is a key component of our hyper-cooperation, which in turn has enabled the emergence of various uniquely human traits, including complex cognition, morality and cumulative culture and technology. However, the evolutionary foundation of the human prosocial sentiment remains...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms5747

    authors: Burkart JM,Allon O,Amici F,Fichtel C,Finkenwirth C,Heschl A,Huber J,Isler K,Kosonen ZK,Martins E,Meulman EJ,Richiger R,Rueth K,Spillmann B,Wiesendanger S,van Schaik CP

    更新日期:2014-08-27 00:00:00

  • A single evolutionary innovation drives the deep evolution of symbiotic N2-fixation in angiosperms.

    abstract::Symbiotic associations occur in every habitat on earth, but we know very little about their evolutionary histories. Current models of trait evolution cannot adequately reconstruct the deep history of symbiotic innovation, because they assume homogenous evolutionary processes across millions of years. Here we use a rec...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms5087

    authors: Werner GD,Cornwell WK,Sprent JI,Kattge J,Kiers ET

    更新日期:2014-06-10 00:00:00

  • Atomically flat single-crystalline gold nanostructures for plasmonic nanocircuitry.

    abstract::Deep subwavelength integration of high-definition plasmonic nanostructures is of key importance in the development of future optical nanocircuitry for high-speed communication, quantum computation and lab-on-a-chip applications. To date, the experimental realization of proposed extended plasmonic networks consisting o...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1143

    authors: Huang JS,Callegari V,Geisler P,Brüning C,Kern J,Prangsma JC,Wu X,Feichtner T,Ziegler J,Weinmann P,Kamp M,Forchel A,Biagioni P,Sennhauser U,Hecht B

    更新日期:2010-01-01 00:00:00

  • Using the president's tweets to understand political diversion in the age of social media.

    abstract::Social media has arguably shifted political agenda-setting power away from mainstream media onto politicians. Current U.S. President Trump's reliance on Twitter is unprecedented, but the underlying implications for agenda setting are poorly understood. Using the president as a case study, we present evidence suggestin...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-19644-6

    authors: Lewandowsky S,Jetter M,Ecker UKH

    更新日期:2020-11-10 00:00:00

  • Skin immunisation activates an innate lymphoid cell-monocyte axis regulating CD8+ effector recruitment to mucosal tissues.

    abstract::CD8+ T cells provide a critical defence from pathogens at mucosal epithelia including the female reproductive tract (FRT). Mucosal immunisation is considered essential to initiate this response, however this is difficult to reconcile with evidence that antigen delivered to skin can recruit protective CD8+ T cells to m...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-09969-2

    authors: Zaric M,Becker PD,Hervouet C,Kalcheva P,Doszpoly A,Blattman N,A O' Neill L,Yus BI,Cocita C,Kwon SY,Baker AH,Lord GM,Klavinskis LS

    更新日期:2019-05-17 00:00:00

  • Leukocyte integrin Mac-1 regulates thrombosis via interaction with platelet GPIbα.

    abstract::Inflammation and thrombosis occur together in many diseases. The leukocyte integrin Mac-1 (also known as integrin αMβ2, or CD11b/CD18) is crucial for leukocyte recruitment to the endothelium, and Mac-1 engagement of platelet GPIbα is required for injury responses in diverse disease models. However, the role of Mac-1 i...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms15559

    authors: Wang Y,Gao H,Shi C,Erhardt PW,Pavlovsky A,A Soloviev D,Bledzka K,Ustinov V,Zhu L,Qin J,Munday AD,Lopez J,Plow E,Simon DI

    更新日期:2017-05-30 00:00:00

  • Selective hydrogenation of 5-(hydroxymethyl)furfural to 5-methylfurfural over single atomic metals anchored on Nb2O5.

    abstract::5-Methylfurfural (MF) is a very useful chemical. Selective hydrogenation of biomass platform molecule 5-(hydroxymethyl)furfural (HMF) to MF using H2 as the reducing agent is very attractive, but challenging because hydrogenation of C=O bond in HMF is more favourable than C-OH both kinetically and thermodynamically, an...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-20878-7

    authors: Li S,Dong M,Yang J,Cheng X,Shen X,Liu S,Wang ZQ,Gong XQ,Liu H,Han B

    更新日期:2021-01-26 00:00:00

  • Functional genetic encoding of sulfotyrosine in mammalian cells.

    abstract::Protein tyrosine O-sulfation (PTS) plays a crucial role in extracellular biomolecular interactions that dictate various cellular processes. It also involves in the development of many human diseases. Regardless of recent progress, our current understanding of PTS is still in its infancy. To promote and facilitate rele...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-18629-9

    authors: He X,Chen Y,Beltran DG,Kelly M,Ma B,Lawrie J,Wang F,Dodds E,Zhang L,Guo J,Niu W

    更新日期:2020-09-24 00:00:00

  • Visualization of exciton transport in ordered and disordered molecular solids.

    abstract::Transport of nanoscale energy in the form of excitons is at the core of photosynthesis and the operation of a wide range of nanostructured optoelectronic devices such as solar cells, light-emitting diodes and excitonic transistors. Of particular importance is the relationship between exciton transport and nanoscale di...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms4646

    authors: Akselrod GM,Deotare PB,Thompson NJ,Lee J,Tisdale WA,Baldo MA,Menon VM,Bulović V

    更新日期:2014-04-16 00:00:00