Abstract:
:DNA polymerase ζ (Polζ) is specialized for the extension step of translesion DNA synthesis (TLS). Despite its central role in maintaining genome integrity, little is known about its overall architecture. Initially identified as a heterodimer of the catalytic subunit Rev3 and the accessory subunit Rev7, yeast Polζ has recently been shown to form a stable four-subunit enzyme (Polζ-d) upon the incorporation of Pol31 and Pol32, the accessory subunits of yeast Polδ. To understand the 3D architecture and assembly of Polζ and Polζ-d, we employed electron microscopy. We show here how the catalytic and accessory subunits of Polζ and Polζ-d are organized relative to each other. In particular, we show that Polζ-d has a bilobal architecture resembling the replicative polymerases and that Pol32 lies in proximity to Rev7. Collectively, our study provides views of Polζ and Polζ-d and a structural framework for understanding their roles in DNA damage bypass.
journal_name
Cell Repjournal_title
Cell reportsauthors
Gómez-Llorente Y,Malik R,Jain R,Choudhury JR,Johnson RE,Prakash L,Prakash S,Ubarretxena-Belandia I,Aggarwal AKdoi
10.1016/j.celrep.2013.08.046subject
Has Abstractpub_date
2013-10-17 00:00:00pages
79-86issue
1issn
2211-1247pii
S2211-1247(13)00506-8journal_volume
5pub_type
杂志文章相关文献
Cell Reports文献大全abstract::SARM1 function and nicotinamide mononucleotide adenylyltransferase 2 (NMNAT2) loss both promote axon degeneration, but their relative relationship in the process is unknown. Here, we show that NMNAT2 loss and resultant changes to NMNAT metabolites occur in injured SARM1-deficient axons despite their delayed degenerati...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2015.02.060
更新日期:2015-03-31 00:00:00
abstract::In neurons, transmembrane proteins are targeted to dendrites in vesicles that traffic solely within the somatodendritic compartment. How these vesicles are retained within the somatodendritic domain is unknown. Here, we use a novel pulse-chase system, which allows synchronous release of exogenous transmembrane protein...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2012.05.018
更新日期:2012-07-26 00:00:00
abstract::Maintaining genome integrity requires the accurate and complete replication of chromosomal DNA. This is of the utmost importance for embryonic stem cells (ESCs), which differentiate into cells of all lineages, including germ cells. However, endogenous and exogenous factors frequently induce stalling of replication for...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2014.01.014
更新日期:2014-02-27 00:00:00
abstract::In spinal muscular atrophy, a neurodegenerative disease caused by ubiquitous deficiency in the survival motor neuron (SMN) protein, sensory-motor synaptic dysfunction and increased excitability precede motor neuron (MN) loss. Whether central synaptic dysfunction and MN hyperexcitability are cell-autonomous events or t...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.06.087
更新日期:2016-08-02 00:00:00
abstract::Vitamin D (VD) is a known differentiating agent, but the role of VD receptor (VDR) is still incompletely described in acute myeloid leukemia (AML), whose treatment is based mostly on antimitotic chemotherapy. Here, we present an unexpected role of VDR in normal hematopoiesis and in leukemogenesis. Limited VDR expressi...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2019.12.055
更新日期:2020-01-21 00:00:00
abstract::In Drosophila larvae, the class IV dendritic arborization (da) neurons are polymodal nociceptors. Here, we show that ppk26 (CG8546) plays an important role in mechanical nociception in class IV da neurons. Our immunohistochemical and functional results demonstrate that ppk26 is specifically expressed in class IV da ne...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2014.10.020
更新日期:2014-11-20 00:00:00
abstract::Inability to mediate fed-fast transitions in the liver is known to cause metabolic dysfunctions and diseases. Intuitively, a failure to inhibit futile translation of state-specific transcripts during fed-fast cycles would abrogate dynamic physiological transitions. Here, we have discovered hepatic fed microRNAs that t...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2019.01.087
更新日期:2019-02-19 00:00:00
abstract::Activation of phosphoinositide 3-kinase (PI3K) signaling plays a central role in regulating proliferation and survival of B cells. Here, we tested the hypothesis that B cell receptor (BCR)-mediated activation of PI3K induces the terminal differentiation factor Blimp-1 that interferes with proliferation and survival, t...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2018.06.035
更新日期:2018-07-10 00:00:00
abstract::In mammals, a cell's decision to divide is thought to be under the control of the Rb/E2F pathway. We previously found that inactivation of the Rb family of cell cycle inhibitors (Rb, p107, and p130) in quiescent liver progenitors leads to uncontrolled division and cancer initiation. Here, we show that, in contrast, de...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2014.06.025
更新日期:2014-07-24 00:00:00
abstract::Antimitotic agents, including Taxol, disrupt microtubule dynamics and cause a protracted mitotic arrest and subsequent cell death. Despite the broad utility of these drugs in breast cancer and other tumor types, clinical response remains variable. Tumor-associated macrophages (TAMs) suppress the duration of Taxol-indu...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2017.03.038
更新日期:2017-04-04 00:00:00
abstract::Large cohorts of human induced pluripotent stem cells (iPSCs) from healthy donors are a potentially powerful tool for investigating the relationship between genetic variants and cellular behavior. Here, we integrate high content imaging of cell shape, proliferation, and other phenotypes with gene expression and DNA se...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2019.01.094
更新日期:2019-02-19 00:00:00
abstract::Most aging hypotheses assume the accumulation of damage, resulting in gradual physiological decline and, ultimately, death. Avoiding protein damage accumulation by enhanced turnover should slow down the aging process and extend the lifespan. However, lowering translational efficiency extends rather than shortens the l...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.07.088
更新日期:2016-09-13 00:00:00
abstract::Ectopic expression of transcription factors (TFs) can reprogram cell state. However, because of the large combinatorial space of possible TF cocktails, it remains difficult to identify TFs that reprogram specific cell types. Here, we develop Reprogram-Seq to experimentally screen thousands of TF cocktails for reprogra...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2019.05.079
更新日期:2019-06-18 00:00:00
abstract::Recently developed brain stimulation techniques have significantly advanced our ability to manipulate the brain's function. However, stimulating specific neurons in a desired region without significant surgical invasion remains a challenge. Here, we demonstrate a neuron-specific and region-targeted neural excitation s...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2020.108033
更新日期:2020-08-18 00:00:00
abstract::Complex febrile seizures (FSs) lead to a high risk of intractable temporal lobe epilepsy during adulthood, yet the pathological process of complex FSs is largely unknown. Here, we demonstrate that activated microglia extensively associated with glutamatergic neuronal soma displace surrounding GABAergic presynapses in ...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2020.108346
更新日期:2020-11-03 00:00:00
abstract::Embryonic cells transcriptionally repress the expression of endogenous and exogenous retroelements. Trim28, a key player in this silencing, is known to act in a large DNA-bound complex, but the other components of the complex are not fully characterized. Here, we show that the zinc finger protein Yin Yang 1 (YY1) is o...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2013.06.003
更新日期:2013-07-11 00:00:00
abstract::Plasmodium parasites are highly selective when infecting hepatocytes and induce many changes within the host cell upon infection. While several host cell factors have been identified that are important for liver infection, our understanding of what facilitates the maintenance of infection remains incomplete. Here, we ...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2019.02.085
更新日期:2019-03-19 00:00:00
abstract::In glioblastoma, invasion and proliferation are presumed to be mutually exclusive events; however, the molecular mechanisms that mediate this switch at the cellular level remain elusive. Previously, we have shown that phospho-OLIG2, a central-nervous-system-specific transcription factor, is essential for tumor growth ...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.06.045
更新日期:2016-07-26 00:00:00
abstract::We report that the mammalian 5-methylcytosine (5mC) oxidase Tet3 exists as three major isoforms and characterized the full-length isoform containing an N-terminal CXXC domain (Tet3FL). This CXXC domain binds to unmethylated CpGs, but, unexpectedly, its highest affinity is toward 5-carboxylcytosine (5caC). We determine...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2015.12.044
更新日期:2016-01-26 00:00:00
abstract::The anaphase-promoting complex/cyclosome (APC/C) and the spindle assembly checkpoint (SAC), which inhibits the APC/C, are essential determinants of mitotic timing and faithful division of genetic material. Activation of the APC/C is known to depend on two APC/C-interacting E2 ubiquitin-conjugating enzymes-UBE2C and UB...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.01.060
更新日期:2016-03-01 00:00:00
abstract::The endoplasmic reticulum (ER) unfolded protein response (UPR(er)) pathway plays an important role in helping pancreatic β cells to adapt their cellular responses to environmental cues and metabolic stress. Although altered UPR(er) gene expression appears in rodent and human type 2 diabetic (T2D) islets, the underlyin...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.03.079
更新日期:2016-05-03 00:00:00
abstract::The neural network of the temporal lobe is thought to provide a cognitive map of our surroundings. Functional analysis of this network has been hampered by coarse tools that often result in collateral damage to other circuits. We developed a chemogenetic system to temporally control electrical input into the hippocamp...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.06.032
更新日期:2016-07-19 00:00:00
abstract::Investigating mechanisms that regulate endothelial cell (EC) growth and survival is important for understanding EC homeostasis and how ECs maintain stem cell niches. We report here that targeted loss of Id genes in adult ECs results in dilated, leaky sinusoids and a pro-inflammatory state that increases in severity ov...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2020.107572
更新日期:2020-04-28 00:00:00
abstract::Megakaryocytes (MKs) come from a complex process of hematopoietic progenitor maturation within the bone marrow that gives rise to de novo circulating platelets. Bone marrow microenvironment contains a large number of adipocytes with a still ill-defined role. This study aims to analyze the influence of adipocytes and i...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2020.107875
更新日期:2020-07-07 00:00:00
abstract::Pancreatic α cells may process proglucagon not only to glucagon but also to glucagon-like peptide-1 (GLP-1). However, the biological relevance of paracrine GLP-1 for β cell function remains unclear. We studied effects of locally derived insulin secretagogues on β cell function and glucose homeostasis using mice with α...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2017.03.005
更新日期:2017-03-28 00:00:00
abstract::Presynaptic endosomes reportedly participate in synaptic vesicle (SV) recycling. However, it remains unclear whether they differentially regulate SV biogenesis and synaptic transmission in different types of synapses and how they are implicated in diseases. Using cryo-electron tomography and endocytic tracing, we unco...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2019.06.006
更新日期:2019-07-23 00:00:00
abstract::The mammalian target of rapamycin complex 1 (mTORC1) integrates signals important for cell growth, and its dysregulation in neural stem cells (NSCs) is implicated in several neurological disorders associated with abnormal neurogenesis and brain size. However, the function of mTORC1 on NSC self-renewal and the downstre...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2013.09.017
更新日期:2013-10-31 00:00:00
abstract::The accumulation of damage caused by oxidative stress has been linked to aging and to the etiology of numerous age-related diseases. The longevity gene, sirtuin 6 (SIRT6), promotes genome stability by facilitating DNA repair, especially under oxidative stress conditions. Here we uncover the mechanism by which SIRT6 is...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2016.08.006
更新日期:2016-09-06 00:00:00
abstract::Systemic immune dysregulation contributes to the development of neuropsychiatric and neurodegenerative diseases. The precise effect of chronic peripheral immune stimulation on myeloid cells across anatomical brain regions is unclear. Here, we demonstrate brain-region-specific differences in myeloid responses induced b...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2020.02.109
更新日期:2020-03-24 00:00:00
abstract::Transient receptor potential (TRP) channels are regulated by diverse stimuli comprising thermal, chemical, and mechanical modalities. They are also commonly regulated by phosphatidylinositol-4,5-bisphosphate (PIP2), with underlying mechanisms largely unknown. We here revealed an intramolecular interaction of the TRPP3...
journal_title:Cell reports
pub_type: 杂志文章
doi:10.1016/j.celrep.2018.01.042
更新日期:2018-02-06 00:00:00