Implication of Arg213 and Arg337 on the kinetic and structural stability of firefly luciferase.

Abstract:

:Possible roles of two different Arginine (Arg; R) 213 and 337 on kinetic and structural stability of Photinus pyralis luciferase have been investigated using thermal and chemical denaturation studies. This enzyme is highly sensitive to protease digestion and temperature, which limits its fieldability, particularly for in vivo imaging. In order to generate more stable luciferases against trypsin digestion, site-directed mutagenesis was conducted to block two representative tryptic sites on the surface of N-terminal domain, via substitution of Arg213 and Arg337 by methionine (Met; M) and glutamine (Gln; Q), respectively [A. Riahi-Madvar, S. Hosseinkhani, Protein engineering, design and selection 22 (2009) 655-663]. The improvement of mutant enzymes stability against protease hydrolysis may be attributed to the more rigidity of the enzyme structure upon mutations, as can be deducted from elevated levels of m(U-N) values and decrease of activation energy. Furthermore, mutation at position 337 which is accompanied with more alteration on the basic kinetic properties relative to mutation at position 213, revealed the high values of the ΔG(H(2)O), half-time of inactivation at 30°C and T(m) for R337Q where Arg213 is maintained in structure. Based on the results, it can be concluded that whilst Arg213 affects structural stability, Arg337 is critical for kinetic stability.

journal_name

Int J Biol Macromol

authors

Riahi-Madvar A,Hosseinkhani S,Rezaee F

doi

10.1016/j.ijbiomac.2012.09.007

subject

Has Abstract

pub_date

2013-01-01 00:00:00

pages

157-63

eissn

0141-8130

issn

1879-0003

pii

S0141-8130(12)00361-3

journal_volume

52

pub_type

杂志文章
  • Zn2+-loaded TOBC nanofiber-reinforced biomimetic calcium alginate hydrogel for antibacterial wound dressing.

    abstract::Calcium alginate hydrogel dressing is an excellent hydrogel dressing because of its excellent absorption characteristics and tear-free pain. However, its application is limited by its poor mechanical properties and non-bacterial properties. Here, we reported a new biomimetic hydrogel dressing with good mechanical prop...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.12.046

    authors: Zhang M,Chen S,Zhong L,Wang B,Wang H,Hong F

    更新日期:2020-01-15 00:00:00

  • Stimuli-responsive self-assembly of cellulose nanocrystals (CNCs): Structures, functions, and biomedical applications.

    abstract::Cellulose nanocrystals (CNCs) have received a significant amount of attention from the researchers. It is used as a nanomaterial for various applications due to its excellent physiochemical properties for the last few decades. Self-assembly is a phenomenon where autonomous reorganization of randomly oriented species o...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2020.03.171

    authors: Ganguly K,Patel DK,Dutta SD,Shin WC,Lim KT

    更新日期:2020-07-15 00:00:00

  • Molecular characteristics of an exopolysaccharide from Lactobacillus rhamnosus KF5 in solution.

    abstract::The molecular weight and chain conformation of an exopolysaccharide (EPS), S2, from Lactobacillus rhamnosus KF5 were determined by size-exclusion chromatography combined with multi-angle laser light scattering (SEC-MALLS), dynamic light scattering (DLS), viscometry and atomic force microscopy (AFM). The weight-average...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2014.10.015

    authors: Shao L,Wu Z,Tian F,Zhang H,Liu Z,Chen W,Guo B

    更新日期:2015-01-01 00:00:00

  • Can green solvents be alternatives for thermal stabilization of collagen?

    abstract::"Go Green" campaign is gaining light for various industrial applications where water consumption needs to be reduced. To resolve this, industries have adopted usage of green, organic solvents, as an alternative to water. For leather making, tanning industry consumes gallons of water. Therefore, for adopting green solv...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2014.05.021

    authors: Mehta A,Rao JR,Fathima NN

    更新日期:2014-08-01 00:00:00

  • Optimization of the extraction of polysaccharides from tobacco waste and their biological activities.

    abstract::A response surface methodology was used to optimize the parameters for extracting the polysaccharides from tobacco waste (TWPs) using hot water. The extraction process, carried out under the following optimized parameters: an extraction temperature of 90°C, a ratio of water to raw material of 54, and an extraction tim...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2016.05.069

    authors: Jing Y,Gao Y,Wang W,Cheng Y,Lu P,Ma C,Zhang Y

    更新日期:2016-10-01 00:00:00

  • Purification and partial characterization of a new lectin from Parkia panurensis Benth. ex H.C. Hopkins seeds (Leguminosae family; Mimosoideae subfamily) and evaluation of its biological effects.

    abstract::Lectins are proteins that have as one of their main characteristics recognizing and reversibly binding to carbohydrates. In this work, it was possible to purify and characterize a lectin from Parkia panurensis (Leguminosae family; Mimosoideae subfamily) seeds by a combination of the techniques: protein precipitation, ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.10.102

    authors: Cavada BS,Bari AU,Pinto-Junior VR,Lossio CF,Silva MTL,Souza LAG,Oliveira MV,Souza-Filho CHD,Correia SEG,Vital APMS,Lima LD,Osterne VJS,Nascimento KS

    更新日期:2020-02-15 00:00:00

  • Protection of groundnut plants from rust disease by application of glucan isolated from a biocontrol agent Acremonium obclavatum.

    abstract::Prior treatment of groundnut leaves with glucan isolated from a biocontrol agent, Acremonium obclavatum, protected against the rust disease. Glucan treated leaves showed increased levels of chitinase and β-1,3-glucanase in the apoplastic fluid. An increase in endogenous levels of salicylic acid also was observed in tr...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.04.190

    authors: Sathiyabama M,Balasubramanian R

    更新日期:2018-09-01 00:00:00

  • Action of 2,2',4,4'-tetrahydroxybenzophenone in the biosynthesis pathway of melanin.

    abstract::2,2',4,4'-tetrahydroxybenzophenone (Uvinul D50), a sunscreen used in cosmetics, has two effects in the melanin biosynthesis pathway. On the one hand, it acts a weak inhibitor of tyrosinase and on the other, it accelerates the conversion of dopachrome to melanin. Uvinul D50 was seen to behave as a weak competitive inhi...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.02.032

    authors: Garcia-Jimenez A,Teruel-Puche JA,Garcia-Ruiz PA,Berna J,Rodríguez-López JN,Tudela J,Garcia-Canovas F

    更新日期:2017-05-01 00:00:00

  • Implications for glycosylated compounds and their anti-cancer effects.

    abstract::Glycosylated compounds are major secondary metabolites of plants, which have various therapeutic effects on human diseases, by acting as anti-cancer, antioxidant, and anti-inflammatory agents. Glycosylation increases stability, bioactivity, and solubility of compounds and improves their pharmacological properties. Two...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2020.06.281

    authors: Pourakbari R,Taher SM,Mosayyebi B,Ayoubi-Joshaghani MH,Ahmadi H,Aghebati-Maleki L

    更新日期:2020-11-15 00:00:00

  • WITHDRAWN: Nanomaterials Chemistry: Recent Developments and New Directions.

    abstract::The Publisher regrets that this article is an accidental duplication of an article that has already been published in Int. J. Biol. Macromol, doi:10.1016/j.ijbiomac.2008.07.012. The duplicate article has therefore been withdrawn. ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2008.08.002

    authors: Kennedy JF

    更新日期:2008-08-19 00:00:00

  • Strategies to expand the therapeutic potential of superoxide dismutase by exploiting delivery approaches.

    abstract::The overproduction of free radicals can cause oxidative-stress damage to a range of biomolecules, and thus potentially contribute to several pathologies, from neurodegenerative disorders to cardiovascular diseases and metabolic disorders. Endogenous antioxidant enzymes, such as superoxide dismutase (SOD), play an impo...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2020.11.149

    authors: Rosa AC,Bruni N,Meineri G,Corsi D,Cavi N,Gastaldi D,Dosio F

    更新日期:2021-01-31 00:00:00

  • Circular dichroism of the non-enzymatic browning products of poly-L-lysine and albumin.

    abstract::Poly-L-lysine (PLL) and bovine serum albumin were used as models in the investigation of non-enzymatic glycation and browning reaction by circular dichroism measurements. Different sugars (glucose, glucose-6-P and ribose) induced different extents of reaction and produced different chromophores that absorbed light in ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/0141-8130(90)90009-y

    authors: Liang JN

    更新日期:1990-08-01 00:00:00

  • Adjustable 'cross-linking' of neighboring DNA molecules in liquid-crystalline dispersions through (daunomycin-copper) polymeric chelate complexes.

    abstract::The interaction of daunomycin molecules with double-stranded DNA in the liquid-crystalline state was investigated. It was shown that at a certain extent of daunomycin binding a change of the mechanism of anthracycline orientation with reference to the DNA chain occurs. This is testified by the alteration of the sense ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/s0141-8130(96)01134-8

    authors: Yevdokimov YM,Salyanov VI,Spener F,Palumbo M

    更新日期:1996-12-01 00:00:00

  • Thermal stress resistance and aging effects of Panax notoginseng polysaccharides on Caenorhabditis elegans.

    abstract::Panax notoginseng attract public attention due to their potential biomedical properties and corresponding health benefits. The present study investigated the anti-aging and thermal stress resistance effects of polysaccharides from P. notoginseng on Caenorhabditis elegans. Results showed polysaccharides had little scav...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2015.07.057

    authors: Feng S,Cheng H,Xu Z,Shen S,Yuan M,Liu J,Ding C

    更新日期:2015-11-01 00:00:00

  • Ca2+-induced stabilization of the nucleoside 2'- deoxyribosyltransferase from Lactobacillus hilgardii ZJS01: Characteristics and application in nucleosides synthesis.

    abstract::A novel nucleoside 2'-deoxyribosyltransferase (LhNDT) from Lactobacillus hilgardii ZJS01 was cloned and expressed in Escherichia coli BL21 (DE3). The amino acid sequence of LhNDT displayed the highest identity of 26% to other reported NDTs. LhNDT was a monomer as revealed by gel filtration chromatography with or witho...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.08.104

    authors: Zhang J,Zhou Y,Liu K,Chu J,Zhang Y,He B

    更新日期:2018-01-01 00:00:00

  • Synthesis and physico-chemical characterization of modified starches from banana (Musa AAB) and its biological activities in diabetic rats.

    abstract::This study describes a simple method of preparation and physico-chemical properties of modified starches (type-3 resistant starches) from banana (Musa AAB), and the modified starches investigated as functional food with a beneficial effect on type-2 diabetes. RS3 was prepared using a method combined with debranching m...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2016.10.050

    authors: Reddy CK,Suriya M,Vidya PV,Haripriya S

    更新日期:2017-01-01 00:00:00

  • Interaction of three new tetradentates Schiff bases containing N2O2 donor atoms with calf thymus DNA.

    abstract::Interaction of 1,3-bis(2-hydroxy-benzylidene)-urea (H2L1), 1,3-bis(2-hydroxy-3-methoxy-benzylidene)-urea (H2L2) and 1,3-bis(2-hydroxy-3-methoxy-benzylidene)-urea nickel(II) (NiL2) with calf-thymus DNA were investigated by UV-vis absorption, fluorescence emission and circular dichroism (CD) spectroscopy as well as cycl...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2015.03.016

    authors: Ajloo D,Shabanpanah S,Shafaatian B,Ghadamgahi M,Alipour Y,Lashgarbolouki T,Saboury AA

    更新日期:2015-01-01 00:00:00

  • Immunostimulatory and anti-allergic potential of novel heterotrimeric lectin from seeds of Zizyphus mauritiana Lam.

    abstract::Zizyphus mauritiana Lam. seeds (ZMS) have been used medicinally as sedative or hypnotic drugs in most of Asian countries. ZMS has significant benefits to the human health. Therefore, we have evaluated immunomodulatory effect of lectin extracted from these ZMSL in both in vitro and in vivo study. Anaphylaxis is a sever...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2021.01.027

    authors: Butle AB,Talmale SA,Jadhao VV,Patil MB,Lambat TL

    更新日期:2021-01-09 00:00:00

  • Preparation and antibacterial properties of ε-polylysine-containing gelatin/chitosan nanofiber films.

    abstract::An effective antibacterial nanofiber film was prepared through the incorporation of ε-polylysine (ε-PL) into gelatin/chitosan-based polymers. All nanofiber films had uniformly disordered fibrous structure with good diameter distribution. The weight ratio of the gelatin/chitosan/ε-PL (G/C/P) influenced the solution pro...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.08.152

    authors: Liu F,Liu Y,Sun Z,Wang D,Wu H,Du L,Wang D

    更新日期:2020-12-01 00:00:00

  • Molecular mechanism of lysozyme adsorption onto chemically modified alginate guar gum matrix.

    abstract::The equilibrium isotherms and adsorption kinetics of lysozyme (LZ) on epichlorohydrin (Epi) cross-linked alginate-guar gum (Alg-GG) matrix were studied. Adsorption kinetics followed a pseudo-first-order model while the equilibrium isotherm could be represented by the Freundlich equation. The maximal amount of LZ adsor...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2016.12.029

    authors: Brassesco ME,Woitovich Valetti N,Picó G

    更新日期:2017-03-01 00:00:00

  • Aspergillus niger lectin elicits MyD88 dependent proliferation and apoptosis at lower and higher doses in immortalized human corneal epithelial cells leading to pathogenesis.

    abstract::An L-fucose lectin, ANL from the corneal smears of a mycotic keratitis patient was reported earlier. Interaction of ANL with immortalized Human Corneal Epithelial Cells (HCECs) was studied in order to assign the role of ANL in pathogenesis. ANL showed strong binding to HCECs which could be blocked by L-fucose and muci...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.10.020

    authors: Jagadeesh N,Belur S,Chachadi VB,Roy S,Inamdar SR

    更新日期:2020-12-15 00:00:00

  • Fabrication and characterization of novel bilayer scaffold from nanocellulose based aerogel for skin tissue engineering applications.

    abstract::The aim of this study was to fabricate a novel bilayer scaffold containing cellulose nanofiber/poly (vinyl) alcohol (CNF/PVA) to evaluate its potential use in skin tissue engineering. Here, the scaffolds were fabricated using a novel one-step freeze-drying technique with two different concentrations of the aforementio...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.06.104

    authors: Ghafari R,Jonoobi M,Amirabad LM,Oksman K,Taheri AR

    更新日期:2019-09-01 00:00:00

  • Highly efficient adsorption of Pb(II) from aqueous solution using amino-functionalized SBA-15/calcium alginate microspheres as adsorbent.

    abstract::In this work, amino-functionalized Santa Barbara Amorphous-15/calcium alginate (ASBA-15@CA) microspheres were fabricated and characterized by FTIR, SEM, XRD, TGA, and XPS analyses. The Pb(II) adsorption properties of the ASBA-15@CA microspheres were studied in terms of the effects of the adsorption time, adsorbent dos...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.12.112

    authors: Song Y,Yang LY,Wang YG,Yu D,Shen J,Ouyang XK

    更新日期:2019-03-15 00:00:00

  • Synthesis of Schiff bases modified inulin derivatives for potential antifungal and antioxidant applications.

    abstract::In this study, the structure of inulin was chemically modified by Schiff bases in order to improve its biological activity. A total of 6 kinds of inulin derivatives were synthesized according to aza-Wittig reaction. Their structures were confirmed by FTIR, 1H NMR, and 13C NMR spectroscopy. The antioxidant activity of ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.09.127

    authors: Chen Y,Mi Y,Li Q,Dong F,Guo Z

    更新日期:2020-01-15 00:00:00

  • Bioactivity reinforced surface patch bound collagen-pectin hydrogel.

    abstract::In this report, we discuss the design of a novel collagen/pectin (CP) hybrid composite hydrogel (CPBG) containing in-situ mineralized bioactive glass (BG) particles to simulate an integrative 3D cell environment. Systematic analysis of the CP sol revealed collagen and pectin molecules interacted regardless of both pos...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2021.01.166

    authors: Goel H,Gupta N,Santhiya D,Dey N,Bohidar HB,Bhattacharya A

    更新日期:2021-01-27 00:00:00

  • Radiation-mediated molecular weight reduction and structural modification in carrageenan potentiates improved photosynthesis and secondary metabolism in peppermint (Mentha piperita L.).

    abstract::In an attempt to gain insights into the possible relationship between the irradiation-mediated molecular weight reduction and structural modification and the growth-promotion activity, characterization of the polysaccharide before and after irradiation was carried out through Fourier Transform Infrared (FT-IR), Ultrav...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.12.022

    authors: Ahmad B,Jahan A,Sadiq Y,Shabbir A,Jaleel H,Khan MMA

    更新日期:2019-03-01 00:00:00

  • Injectable self-healing carboxymethyl chitosan-zinc supramolecular hydrogels and their antibacterial activity.

    abstract::Injectable and self-healing hydrogels have found numerous applications in drug delivery, tissue engineering and 3D cell culture. Herein, we report an injectable self-healing carboxymethyl chitosan (CMCh) supramolecular hydrogels cross-linked by zinc ions (Zn2+). Supramolecular hydrogels were obtained by simple additio...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.04.025

    authors: Wahid F,Zhou YN,Wang HS,Wan T,Zhong C,Chu LQ

    更新日期:2018-07-15 00:00:00

  • Characterization of intermediate state of myoglobin in the presence of PEG 10 under physiological conditions.

    abstract::The macromolecular crowding progressively has been gaining prominence in recent years as it acts as a sword with double-edge on protein stability and folding, i.e., showing assorted results of having both stabilizing and destabilizing effects. We studied the effects of different concentrations of polyethylene glycol (...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.02.084

    authors: Parray ZA,Shahid S,Ahmad F,Hassan MI,Islam A

    更新日期:2017-06-01 00:00:00

  • Effects of Glycyrrhiza glabra polysaccharides on immune and antioxidant activities in high-fat mice.

    abstract::The purpose of this study was to investigate the immune and antioxidant activities of Glycyrrhiza glabra polysaccharides (GGP) in rats fed high-fat diet. The experiment was performed on four groups of growing Kunming mice. The results of the experiment showed a statistically significant decrease in serum antioxidant e...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2009.04.001

    authors: Hong YK,Wu HT,Ma T,Liu WJ,He XJ

    更新日期:2009-07-01 00:00:00

  • Roles of galectin-3 in metabolic disorders and tumor cell metabolism.

    abstract::The galactoside-binding protein galectin-3 is commonly overexpressed by cancer cells and promotes cancer progression and metastasis. Over the past few years, evidence has emerged that galectin-3 is also overexpressed in several metabolic malfunction conditions such as diabetes, obesity and atherosclerosis and is invol...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2019.09.118

    authors: Li YS,Li XT,Yu LG,Wang L,Shi ZY,Guo XL

    更新日期:2020-01-01 00:00:00