Reversal of aberrant cancer methylome and transcriptome upon direct reprogramming of lung cancer cells.

Abstract:

:Recent reports on direct reprogramming of cancer cells (iPCs) which results in reduced tumorigenic potential has attributed the importance of epigenetics in tumorigenesis, but lacked genome-wide analysis. Here we describe successful generation of iPCs from non-small cell lung cancer (NSCLC) cell lines. Following reprogramming, they resembled embryonic stem and induced pluripotent stem cells in pluripotency markers expression, gene expression patterns and in vitro differentiation ability. Genome-wide methylation analysis revealed that aberrantly methylated promoters which were mostly developmental-associated genes and tumor suppressors; as well as commonly upregulated genes in NSCLC i.e. KRT19 and S100P were reversed in iPCs upon reprogramming. Also, the reversal of oncogenes and tumor suppressors status were partially explainable by DNA methylation. These findings suggest that DNA methylation patterns explain the downstream transcriptional effects, which potentially caused the reduced tumorigenicity in iPCs, thus providing evidence that reprogramming reverses the aberrantly dysregulated genes in NSCLC both epigenetically and transcriptionally.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Mahalingam D,Kong CM,Lai J,Tay LL,Yang H,Wang X

doi

10.1038/srep00592

subject

Has Abstract

pub_date

2012-01-01 00:00:00

pages

592

issn

2045-2322

journal_volume

2

pub_type

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