Metabolically engineered methylotrophic yeast cells and enzymes as sensor biorecognition elements.

Abstract:

:An extended definition of the term metabolic engineering is given and its successful use in the construction of biorecognition elements of sensors is demonstrated. It is shown that genetic and chemical modifications of methylotrophic yeast cells provide directed changes in their physiological responses towards methanol, ethanol and formaldehyde resulting in enhanced selectivity and shorter time response of the corresponding potentiometric and amperometric biosensors.

journal_name

FEMS Yeast Res

journal_title

FEMS yeast research

authors

Gonchar M,Maidan M,Korpan Y,Sibirny V,Kotylak Z,Sibirny A

doi

10.1016/S1567-1356(02)00124-1

keywords:

subject

Has Abstract

pub_date

2002-08-01 00:00:00

pages

307-14

issue

3

eissn

1567-1356

issn

1567-1364

pii

S1567135602001241

journal_volume

2

pub_type

杂志文章
  • Pkc1 and actin polymerisation activities play a role in ribosomal gene repression associated with secretion impairment caused by oxidative stress.

    abstract::In Saccharomyces cerevisiae, the cell integrity pathway plays a role in the oxidative stress response. In this study, we show that the Pkc1 protein mediates oxidative signalling by helping to downregulate ribosomal gene expression when cells are exposed to hydrogen peroxide. An active actin cytoskeleton is required fo...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2011.00754.x

    authors: Mitjana FV,Petkova MI,Pujol-Carrion N,de la Torre-Ruiz MA

    更新日期:2011-12-01 00:00:00

  • Molecular characterization of Saccharomyces cerevisiae α-pheromone by mass spectrometry-based peptidomics.

    abstract::Using modern peptide analytical MS technology ('Peptidomics'), it is possible to analyze yeast α-pheromone both qualitatively and semi-quantitatively directly from conditioned cell culture media. MS/MS analysis shows both forms of α-pheromone (MFα and MFα') detectable and identifiable straight from WT supernatants. In...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12032

    authors: Bener Aksam E,Pinkse MW,Verhaert PD

    更新日期:2013-05-01 00:00:00

  • Genetic interactions among the Arl1 GTPase and intracellular Na(+) /H(+) antiporters in pH homeostasis and cation detoxification.

    abstract::The roles of intracellular GTPase Arl1 and organellar cation/H(+) antiporters (Kha1 and Nhx1) in Saccharomyces cerevisiae tolerance to various stress factors were investigated and interesting new phenotypes of strains devoid of these proteins were found. The role of Arl1 GTPase in their tolerance to various cations is...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2010.00661.x

    authors: Marešová L,Sychrová H

    更新日期:2010-11-01 00:00:00

  • Mitochondrial genome from the facultative anaerobe and petite-positive yeast Dekkera bruxellensis contains the NADH dehydrogenase subunit genes.

    abstract::The progenitor of the Dekkera/Brettanomyces clade separated from the Saccharomyces/Kluyveromyces clade over 200 million years ago. However, within both clades, several lineages developed similar physiological traits. Both Saccharomyces cerevisiae and Dekkera bruxellensis are facultative anaerobes; in the presence of e...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2010.00644.x

    authors: Procházka E,Poláková S,Piskur J,Sulo P

    更新日期:2010-08-01 00:00:00

  • Two proteins from Saccharomyces cerevisiae: Pfy1 and Pkc1, play a dual role in activating actin polymerization and in increasing cell viability in the adaptive response to oxidative stress.

    abstract::In this work, we show that the proteins Pkc1 and Pfy1 play a role in the repolarization of the actin cytoskeleton and in cell survival in response to oxidative stress. We have also developed an assay to determine the actin polymerization capacity of total protein extracts using fluorescence recovery after photobleachi...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2009.00565.x

    authors: Pujol N,Bonet C,Vilella F,Petkova MI,Mozo-Villarías A,de la Torre-Ruiz MA

    更新日期:2009-12-01 00:00:00

  • Yeast diversity in rice-cassava fermentations produced by the indigenous Tapirapé people of Brazil.

    abstract::The Tapirapé people of the Tapi'itãwa tribe of Brazil produce several fermented foods and beverages, one of which is called 'cauim'. This beverage usually makes up the main staple food for adults and children. Several substrates are used in its production, including cassava, rice, corn, maize and peanuts. A fermentati...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2007.00241.x

    authors: Schwan RF,Almeida EG,Souza-Dias MA,Jespersen L

    更新日期:2007-09-01 00:00:00

  • Ume6p is required for germination and early colony development of yeast ascospores.

    abstract::Ume6p is a nonessential transcription factor that represses meiotic gene expression during vegetative growth in budding yeast. To relieve this repression, Ume6p is destroyed as cells enter meiosis and is not resynthesized until spore wall assembly. The present study reveals that spores derived from a ume6 null homozyg...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2010.00696.x

    authors: Strich R,Khakhina S,Mallory MJ

    更新日期:2011-02-01 00:00:00

  • Xylose and cellobiose fermentation to ethanol by the thermotolerant methylotrophic yeast Hansenula polymorpha.

    abstract::Wild-type strains of the thermotolerant methylotrophic yeast Hansenula polymorpha are able to ferment glucose, cellobiose and xylose to ethanol. H. polymorpha most actively fermented sugars to ethanol at 37 degrees C, whereas the well-known xylose-fermenting yeast Pichia stipitis could not effectively ferment carbon s...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1016/S1567-1356(03)00146-6

    authors: Ryabova OB,Chmil OM,Sibirny AA

    更新日期:2003-11-01 00:00:00

  • Ubiquinone biosynthesis in Saccharomyces cerevisiae: the molecular organization of O-methylase Coq3p depends on Abc1p/Coq8p.

    abstract::Coenzyme Q is a redox-active lipid that functions as an electron carrier in the mitochondrial respiratory chain. Q-biosynthesis in Saccharomyces cerevisiae requires at least nine proteins (Coq1p-Coq9p). The molecular function of Coq8p is still unknown; however, lack of Q and the concomitant accumulation of the interme...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2008.00436.x

    authors: Tauche A,Krause-Buchholz U,Rödel G

    更新日期:2008-12-01 00:00:00

  • Identification and characterization of Csh3 as an SH3 protein that interacts with fission yeast Cap1.

    abstract::Schizosaccharomyces pombe Cap1 has been identified as the (adenylyl) cyclase-associated protein. Cap1 was able to bind Cap1 itself and actin. Cap1 localized at the growing tip, and this localization was dependent on the Cap1 P2 region. In a two-hybrid screening using cap1 as bait, we isolated csh3, which encodes a pro...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fov097

    authors: Yamamoto T,Kobayashi-Ooka Y,Zhou GL,Kawamukai M

    更新日期:2015-12-01 00:00:00

  • Expression of the alpha3/beta1 isoform of human Na,K-ATPase in the methylotrophic yeast Pichia pastoris.

    abstract::Na,K-ATPase is a crucial enzyme for ion homeostasis in human tissues. Different isozymes are produced by assembly of four alpha- and three beta-subunits. The expression of the alpha3/beta1 isozyme is confined to brain and heart. Its heterologous production has so far never been attempted in a lower eukaryote. In this ...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2007.00227.x

    authors: Reina C,Padoani G,Carotti C,Merico A,Tripodi G,Ferrari P,Popolo L

    更新日期:2007-06-01 00:00:00

  • Expression of the glucose transporter HXT1 involves the Ser-Thr protein phosphatase Sit4 in Saccharomyces cerevisiae.

    abstract::We studied the effect of the loss of the Ser-Thr protein phosphatase Sit4, an important post-translational regulator, on the steady-state levels of the low-affinity glucose transporter Hxt1p and observed a delay in its appearance after high glucose induction, slow growth, and diminished glucose consumption. By analyzi...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2012.00839.x

    authors: Souza AA,Miranda MN,da Silva SF,Bozaquel-Morais B,Masuda CA,Ghislain M,Montero-Lomelí M

    更新日期:2012-12-01 00:00:00

  • Peer pressure: evolutionary responses to biotic pressures in wine yeasts.

    abstract::In the macroscopic world, ecological interactions between multiple species of fauna and flora are recognised as major role-players in the evolution of any particular species. By comparison, research on ecological interactions as a driver of evolutionary adaptation in microbial ecosystems has been neglected. The evolut...

    journal_title:FEMS yeast research

    pub_type: 杂志文章,评审

    doi:10.1093/femsyr/foz072

    authors: Conacher CG,Rossouw D,Bauer FFB

    更新日期:2019-11-01 00:00:00

  • Impact of glutathione metabolism on zinc homeostasis in Saccharomyces cerevisiae.

    abstract::Zinc is a crucial mineral for all organisms as it is an essential cofactor for the proper function of a plethora of proteins and depletion of zinc causes oxidative stress. Glutathione is the major redox buffering agent in the cell and therefore important for mitigation of the adverse effects of oxidative stress. In ma...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fox028

    authors: Steiger MG,Patzschke A,Holz C,Lang C,Causon T,Hann S,Mattanovich D,Sauer M

    更新日期:2017-06-01 00:00:00

  • Directed gene copy number amplification in Pichia pastoris by vector integration into the ribosomal DNA locus.

    abstract::The yeast Pichia pastoris is a widely used host organism for heterologous protein production. One of the basic steps for strain improvement is to ensure a sufficient level of transcription of the heterologous gene, based on promoter strength and gene copy number. To date, high-copy-number integrants of P. pastoris are...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2009.00561.x

    authors: Marx H,Mecklenbräuker A,Gasser B,Sauer M,Mattanovich D

    更新日期:2009-12-01 00:00:00

  • A link between Sas2-mediated H4 K16 acetylation, chromatin assembly in S-phase by CAF-I and Asf1, and nucleosome assembly by Spt6 during transcription.

    abstract::The histone acetyltransferase Sas2 is part of the SAS-I complex and acetylates lysine 16 of histone H4 (H4 K16Ac) in the genome of Saccharomyces cerevisiae. Sas2-mediated H4 K16Ac is strongest over the coding region of genes with low expression. However, it is unclear how Sas2-mediated acetylation is incorporated into...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fov073

    authors: Reiter C,Heise F,Chung HR,Ehrenhofer-Murray AE

    更新日期:2015-11-01 00:00:00

  • Hansenula polymorpha Swi1p and Snf2p are essential for methanol utilisation.

    abstract::We have cloned the Hansenula polymorpha SWI1 and SNF2 genes by functional complementation of mutants that are defective in methanol utilisation. These genes encode proteins similar to Saccharomyces cerevisiae Swi1p and Snf2p, which are subunits of the SWI/SNF complex. This complex belongs to the family of nucleosome-r...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1016/j.femsyr.2004.01.009

    authors: Ozimek P,Lahtchev K,Kiel JA,Veenhuis M,van der Klei IJ

    更新日期:2004-05-01 00:00:00

  • Characteristics of Flo11-dependent flocculation in Saccharomyces cerevisiae.

    abstract::The FLO11-encoded flocculin is required for a variety of important phenotypes in Saccharomyces cerevisiae, including flocculation, adhesion to agar and plastic, invasive growth, pseudohyphae formation and biofilm development. We present evidence that Flo11p belongs to the Flo1-type class of flocculins rather than to t...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1016/j.femsyr.2005.05.004

    authors: Bayly JC,Douglas LM,Pretorius IS,Bauer FF,Dranginis AM

    更新日期:2005-12-01 00:00:00

  • XYLH encodes a xylose/H+ symporter from the highly related yeast species Debaryomyces fabryi and Debaryomyces hansenii.

    abstract::The closely related yeasts Debaryomyces fabryi and Debaryomyces hansenii are excellent xylose consumers. We previously described the activity of a high-affinity xylose/H(+) symport from an industrial strain of D. hansenii subsequently reclassified as D. fabryi. We now report the identification of the gene encoding thi...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12061

    authors: Ferreira D,Nobre A,Silva ML,Faria-Oliveira F,Tulha J,Ferreira C,Lucas C

    更新日期:2013-11-01 00:00:00

  • Development of a genetic transformation toolkit for Brettanomyces bruxellensis.

    abstract::Brettanomyces bruxellensis is usually considered a spoilage microorganism, responsible for significant economic losses during the production of fermented beverages such as wine, beer and cider, though for some styles of beer its influence is essential. In recent years, the competitiveness of this yeast in bioethanol p...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/foy070

    authors: Varela C,Lleixà J,Curtin C,Borneman A

    更新日期:2018-11-01 00:00:00

  • The helicase CaHmi1p is required for wild-type mitochondrial DNA organization in Candida albicans.

    abstract::The mechanistic details of mtDNA maintenance in petite-negative yeasts have remained largely unexplored. We report here that the DNA helicase Hmi1p plays a crucial role in mtDNA stability in Candida albicans. Like its counterpart in Saccharomyces cerevisiae, Hmi1p in C. albicans (CaHmi1p) contains a C-terminal mitocho...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2006.00132.x

    authors: Jõers P,Gerhold JM,Sedman T,Kuusk S,Sedman J

    更新日期:2007-01-01 00:00:00

  • Isolation of two cell populations from yeast during high-level alcoholic fermentation that resemble quiescent and nonquiescent cells from the stationary phase on glucose.

    abstract::High-level production of bioethanol (140 g L(-1) in 45 h) in aerated fed-batch cultures of Saccharomyces cerevisiae was shown to be linked to the length of a production phase uncoupled to the growth. The induction of this phase was characterized by metabolic and morphologic changes reminiscent of those occurring in th...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2009.00553.x

    authors: Benbadis L,Cot M,Rigoulet M,Francois J

    更新日期:2009-12-01 00:00:00

  • Gas bubble formation in the cytoplasm of a fermenting yeast.

    abstract::Current paradigms assume that gas bubbles cannot be formed within yeasts although these workhorses of the baking and brewing industries vigorously produce and release CO(2) gas. We show that yeasts produce gas bubbles that fill a significant part of the cell. The missing link between intracellular CO(2) production b...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.12004.x

    authors: Swart CW,Dithebe K,Pohl CH,Swart HC,Coetsee E,van Wyk PW,Swarts JC,Lodolo EJ,Kock JL

    更新日期:2012-11-01 00:00:00

  • The interplay between sulphur and selenium metabolism influences the intracellular redox balance in Saccharomyces cerevisiae.

    abstract::Selenium (Se) is an essential element for most eukaryotic organisms, including humans. The balance between Se toxicity and its beneficial effects is very delicate. It has been demonstrated that a diet enriched with Se has cancer prevention potential in humans. The most popular commercial Se supplementation is selenize...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2011.00757.x

    authors: Mapelli V,Hillestrøm PR,Patil K,Larsen EH,Olsson L

    更新日期:2012-02-01 00:00:00

  • Phenothiazine is a potent inhibitor of prostaglandin E2 production by Candida albicans biofilms.

    abstract::Candida albicans is an important opportunistic yeast pathogen of humans and has the ability to form drug-resistant biofilms, with increased expression of multidrug ATP-binding cassette (ABC) transporters. These biofilms are also capable of secreting immune-modulating prostaglandin E2 (PGE2 ) from host-derived arachido...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12093

    authors: Ells R,Kemp G,Albertyn J,Kock JL,Pohl CH

    更新日期:2013-12-01 00:00:00

  • Efficient use of DNA molecular markers to construct industrial yeast strains.

    abstract::Saccharomyces cerevisiae yeast strains exhibit a huge genotypic and phenotypic diversity. Breeding strategies taking advantage of these characteristics would contribute greatly to improving industrial yeasts. Here we mapped and introgressed chromosomal regions controlling industrial yeast properties, such as hydrogen ...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2007.00281.x

    authors: Marullo P,Yvert G,Bely M,Aigle M,Dubourdieu D

    更新日期:2007-12-01 00:00:00

  • The transcription factor Ace2 and its paralog Swi5 regulate ethanol production during static fermentation through their targets Cts1 and Rps4a in Saccharomyces cerevisiae.

    abstract::Saccharomyces cerevisiae is the most widely used fermentation organism for ethanol production. However, the gene expression regulatory networks behind the ethanol fermentation are still not fully understood. Using a static fermentation model, we examined the ethanol yields on biomass of deletion mutants for 77 yeast g...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fow022

    authors: Wu Y,Du J,Xu G,Jiang L

    更新日期:2016-05-01 00:00:00

  • Heat shock-inducible expression vectors for use in Schizosaccharomyces pombe.

    abstract::A new, heat shock-inducible expression system based on an endogenous hsp16+ promoter was developed for use in the fission yeast Schizosaccharomyces pombe. Analysis of GFP expression profiles indicated that a 1.2-kb segment of the hsp16+ promoter region was sufficient to drive expression of heterologous protein. The hs...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2006.00093.x

    authors: Fujita Y,Tohda H,Giga-Hama Y,Takegawa K

    更新日期:2006-09-01 00:00:00

  • Linking cellular proteostasis to yeast longevity.

    abstract::Proteostasis is a cellular housekeeping process that refers to the healthy maintenance of the cellular proteome that governs the fate of proteins from synthesis to degradation. Perturbations of proteostasis might result in protein dysfunction with consequent deleterious effects that can culminate in cell death. To dea...

    journal_title:FEMS yeast research

    pub_type: 杂志文章,评审

    doi:10.1093/femsyr/foy043

    authors: Sampaio-Marques B,Ludovico P

    更新日期:2018-08-01 00:00:00

  • STE11 disruption reveals the central role of a MAPK pathway in dimorphism and mating in Yarrowia lipolytica.

    abstract::Yarrowia lipolytica is a dimorphic fungus whose morphology is controlled by several factors such as pH and different compounds. To determine if the STE11-mitogen-activated protein kinase (MAPK) pathway plays a role in dimorphism of Y. lipolytica, we isolated the gene encoding a Mapkkk. The isolated gene (STE11) has an...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2006.00084.x

    authors: Cervantes-Chávez JA,Ruiz-Herrera J

    更新日期:2006-08-01 00:00:00