Genetic interactions among the Arl1 GTPase and intracellular Na(+) /H(+) antiporters in pH homeostasis and cation detoxification.

Abstract:

:The roles of intracellular GTPase Arl1 and organellar cation/H(+) antiporters (Kha1 and Nhx1) in Saccharomyces cerevisiae tolerance to various stress factors were investigated and interesting new phenotypes of strains devoid of these proteins were found. The role of Arl1 GTPase in their tolerance to various cations is not caused by an altered plasma-membrane potential. Besides the known sensitivity of arl1 mutants to high temperature, we discovered their sensitivity to low temperature. We found for the first time that in the absence of Arl1p, Kha1p increases potassium, sodium and lithium tolerance, and can thus be categorized as an antiporter with broad substrate specificity. Kha1p also participates in the detoxification of undesired chemical compounds, pH regulation and growth at nonoptimal temperatures. Cells with the combined deletions of all three genes have considerable difficulty growing under nonoptimal conditions. We conclude that Arl1p, Kha1p and Nhx1p collaborate in survival strategies at nonoptimal pH, temperatures and cation concentrations, but work independent of each other.

journal_name

FEMS Yeast Res

journal_title

FEMS yeast research

authors

Marešová L,Sychrová H

doi

10.1111/j.1567-1364.2010.00661.x

subject

Has Abstract

pub_date

2010-11-01 00:00:00

pages

802-11

issue

7

eissn

1567-1356

issn

1567-1364

pii

FYR661

journal_volume

10

pub_type

杂志文章
  • Improved raw starch amylase production by Saccharomyces cerevisiae using codon optimisation strategies.

    abstract::Amylases are used in a variety of industries that have a specific need for alternative enzymes capable of hydrolysing raw starch. Five α-amylase and five glucoamylase-encoding genes were expressed in the Saccharomyces cerevisiae Y294 laboratory strain to select for recombinant strains that best hydrolysed raw corn sta...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/foy127

    authors: Cripwell RA,Rose SH,Viljoen-Bloom M,van Zyl WH

    更新日期:2019-03-01 00:00:00

  • Cbc2p, Upf3p and eIF4G are components of the DRN (Degradation of mRNA in the Nucleus) in Saccharomyces cerevisiae.

    abstract::Messenger RNAs retained in the nucleus of Saccharomyces cerevisiae are subjected to a degradation system designated DRN (Degradation of mRNA in the Nucleus) that is dependent on the nuclear mRNA cap-binding protein, Cbc1p, as well as nuclear exosome component Rrp6p, a 3' to 5' exoribonuclease. DRN has been shown to ac...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12180

    authors: Das S,Saha U,Das B

    更新日期:2014-09-01 00:00:00

  • Influence of climatic conditions on the isolation of members of the Cryptococcus neoformans species complex from trees in Colombia from 1992-2004.

    abstract::The aim of this retrospective study was to analyze the relationship between occurrence of the serotypes of the Cryptococcus neoformans species complex in tree samples and the climatic conditions registered during samplings in four cities of Colombia, between 1992 and 2004, by means of a logistic regression model and l...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2006.00090.x

    authors: Granados DP,Castañeda E

    更新日期:2006-06-01 00:00:00

  • Cryptococcus neoformans Ca(2+) homeostasis requires a chloride channel/antiporter Clc1 in JEC21, but not in H99.

    abstract::CLC-type chloride/proton antiporters are required for copper/iron homeostasis in fungi. A relationship between CLCs and Ca(2+) homeostasis has not been found before. Here we demonstrate the requirement of the antiporter CLC1 for Ca(2+) homeostasis/signaling in Cryptococcus neoformans. The deletion of CLC1 in JEC21 r...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2011.00763.x

    authors: Li D,Zhang X,Li Z,Yang J,Pan J,Zhu X

    更新日期:2012-02-01 00:00:00

  • Galactose transporters discriminate steric anomers at the cell surface in yeast.

    abstract::Aldose-1-epimerase or mutarotase (EC 5.1.3.3) catalyzes interconversion of alpha/beta-anomers of aldoses, such as glucose and galactose, and is distributed in a wide variety of organisms from bacteria to humans. Nevertheless, the physiological role of this enzyme has been elusive in most cases, because the alpha-form ...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2009.00517.x

    authors: Fukasawa T,Sakurai H,Nogi Y,Baruffini E

    更新日期:2009-08-01 00:00:00

  • Xylose and cellobiose fermentation to ethanol by the thermotolerant methylotrophic yeast Hansenula polymorpha.

    abstract::Wild-type strains of the thermotolerant methylotrophic yeast Hansenula polymorpha are able to ferment glucose, cellobiose and xylose to ethanol. H. polymorpha most actively fermented sugars to ethanol at 37 degrees C, whereas the well-known xylose-fermenting yeast Pichia stipitis could not effectively ferment carbon s...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1016/S1567-1356(03)00146-6

    authors: Ryabova OB,Chmil OM,Sibirny AA

    更新日期:2003-11-01 00:00:00

  • Cdc37p is involved in osmoadaptation and controls high osmolarity-induced cross-talk via the MAP kinase Kss1p.

    abstract::Cdc37p, the p50 homolog of Saccharomyces cerevisiae, is an Hsp90 cochaperone involved in the targeting of protein kinases to Hsp90. Here we report a role for Cdc37p in osmoadaptive signalling in this yeast. The osmosensitive phenotype that is displayed by the cdc37-34 mutant strain appears not to be the consequence of...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2007.00237.x

    authors: Yang XX,Hawle P,Bebelman JP,Meenhuis A,Siderius M,van der Vies SM

    更新日期:2007-09-01 00:00:00

  • Molecular characterization of Saccharomyces cerevisiae α-pheromone by mass spectrometry-based peptidomics.

    abstract::Using modern peptide analytical MS technology ('Peptidomics'), it is possible to analyze yeast α-pheromone both qualitatively and semi-quantitatively directly from conditioned cell culture media. MS/MS analysis shows both forms of α-pheromone (MFα and MFα') detectable and identifiable straight from WT supernatants. In...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12032

    authors: Bener Aksam E,Pinkse MW,Verhaert PD

    更新日期:2013-05-01 00:00:00

  • Microbial alcohol-conferred hemolysis is a late response to alcohol stress.

    abstract::We have reported previously that growth on alcohol vapors confers hemolytic properties on certain yeast species and strains ['microbial alcohol-conferred hemolysis' (MACH)]. In a recent study, we analyzed the genetic basis of MACH in Saccharomyces cerevisiae using the EUROSCARF mutant collection. The data suggested th...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2011.00722.x

    authors: Shuster A,Korem M,Jacob-Hirsch J,Amariglio N,Rechavi G,Rosenberg M

    更新日期:2011-06-01 00:00:00

  • Methionine catabolism in Saccharomyces cerevisiae.

    abstract::The catabolism of methionine to methionol and methanethiol in Saccharomyces cerevisiae was studied using (13)C NMR spectroscopy, GC-MS, enzyme assays and a number of mutants. Methionine is first transaminated to alpha-keto-gamma-(methylthio)butyrate. Methionol is formed by a decarboxylation reaction, which yields meth...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1356.2005.00005.x

    authors: Perpète P,Duthoit O,De Maeyer S,Imray L,Lawton AI,Stavropoulos KE,Gitonga VW,Hewlins MJ,Dickinson JR

    更新日期:2006-01-01 00:00:00

  • Yeast diversity in rice-cassava fermentations produced by the indigenous Tapirapé people of Brazil.

    abstract::The Tapirapé people of the Tapi'itãwa tribe of Brazil produce several fermented foods and beverages, one of which is called 'cauim'. This beverage usually makes up the main staple food for adults and children. Several substrates are used in its production, including cassava, rice, corn, maize and peanuts. A fermentati...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2007.00241.x

    authors: Schwan RF,Almeida EG,Souza-Dias MA,Jespersen L

    更新日期:2007-09-01 00:00:00

  • CRIMEtoYHU: a new web tool to develop yeast-based functional assays for characterizing cancer-associated missense variants.

    abstract::Evaluation of the functional impact of cancer-associated missense variants is more difficult than for protein-truncating mutations and consequently standard guidelines for the interpretation of sequence variants have been recently proposed. A number of algorithms and software products were developed to predict the imp...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fox078

    authors: Mercatanti A,Lodovichi S,Cervelli T,Galli A

    更新日期:2017-12-01 00:00:00

  • Genome sequence and physiological analysis of Yamadazyma laniorum f.a. sp. nov. and a reevaluation of the apocryphal xylose fermentation of its sister species, Candida tenuis.

    abstract::Xylose fermentation is a rare trait that is immensely important to the cellulosic biofuel industry, and Candida tenuis is one of the few yeasts that has been reported with this trait. Here we report the isolation of two strains representing a candidate sister species to C. tenuis. Integrated analysis of genome sequenc...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fox019

    authors: Haase MAB,Kominek J,Langdon QK,Kurtzman CP,Hittinger CT

    更新日期:2017-05-01 00:00:00

  • Detailed search for protein kinase(s) involved in plasma membrane H+-ATPase activity regulation of yeast cells.

    abstract::This study displays a screening using yeast strains deficient in protein kinases known to exist in Saccharomyces cerevisiae. From 95 viable single mutants, 20 mutants appear to be affected in the glucose-induced extracellular acidification. The mutants that are unaffected in calcium signaling were tested for their sen...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fov003

    authors: Pereira RR,Castanheira D,Teixeira JA,Bouillet LE,Ribeiro EM,Trópia MM,Alvarez F,Correa LF,Mota BE,Conceição LE,Castro IM,Brandão RL

    更新日期:2015-03-01 00:00:00

  • Cadmium-induced activation of high osmolarity glycerol pathway through its Sln1 branch is dependent on the MAP kinase kinase kinase Ssk2, but not its paralog Ssk22, in budding yeast.

    abstract::Cadmium ions disrupt reactive oxygen species/Ca(2+) homeostasis and subsequently elicit cell death and adaptive signaling cascades in eukaryotic cells. Through a functional genomics approach, we have identified deletion mutants of 106 yeast genes, including three MAP kinase genes (HOG1, SLT2, and KSS1), are sensitive ...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12220

    authors: Jiang L,Cao C,Zhang L,Lin W,Xia J,Xu H,Zhang Y

    更新日期:2014-12-01 00:00:00

  • Activation of a peroxisomal Pichia pastoris D-amino acid oxidase, which uses d-alanine as a preferred substrate, depends on pyruvate carboxylase.

    abstract::d-Amino acid oxidase (DAO) is an important flavo-enzyme that catalyzes the oxidative deamination of d-amino acids into the corresponding alpha-keto acid, ammonia and H(2)O(2). We identified two amino acid oxidases in the methylotrophic yeast Pichia pastoris: Dao1p, which preferentially uses d-alanine as a substrate, a...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2010.00647.x

    authors: Klompmaker SH,Kilic A,Baerends RJ,Veenhuis M,van der Klei IJ

    更新日期:2010-09-01 00:00:00

  • Cryptococcal phosphoglucose isomerase is required for virulence factor production, cell wall integrity and stress resistance.

    abstract::Regulation of virulence factor production in the pathogen Cryptococcus neoformans remains to be fully illustrated. We present here a finding that a gene, encoding the glycolysis enzyme phosphoglucose isomerase (Pgi1), is critical for the biosynthesis of melanin and capsule, cell wall integrity and resistance to stress...

    journal_title:FEMS yeast research

    pub_type: 社论

    doi:10.1093/femsyr/fov072

    authors: Zhang P,Wei D,Li Z,Sun Z,Pan J,Zhu X

    更新日期:2015-11-01 00:00:00

  • Dynamic 13C-labeling experiments prove important differences in protein turnover rate between two Saccharomyces cerevisiae strains.

    abstract::We developed a method for the quantification of protein turnover rates using (13)C-labeled substrates combined with the analysis of the labeling patterns of proteinogenic amino acids. Using this method, the specific amino acid turnover rates between proteins and the pool of free amino acids were determined for eight d...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2012.00823.x

    authors: Hong KK,Hou J,Shoaie S,Nielsen J,Bordel S

    更新日期:2012-11-01 00:00:00

  • A link between Sas2-mediated H4 K16 acetylation, chromatin assembly in S-phase by CAF-I and Asf1, and nucleosome assembly by Spt6 during transcription.

    abstract::The histone acetyltransferase Sas2 is part of the SAS-I complex and acetylates lysine 16 of histone H4 (H4 K16Ac) in the genome of Saccharomyces cerevisiae. Sas2-mediated H4 K16Ac is strongest over the coding region of genes with low expression. However, it is unclear how Sas2-mediated acetylation is incorporated into...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fov073

    authors: Reiter C,Heise F,Chung HR,Ehrenhofer-Murray AE

    更新日期:2015-11-01 00:00:00

  • Two proteins from Saccharomyces cerevisiae: Pfy1 and Pkc1, play a dual role in activating actin polymerization and in increasing cell viability in the adaptive response to oxidative stress.

    abstract::In this work, we show that the proteins Pkc1 and Pfy1 play a role in the repolarization of the actin cytoskeleton and in cell survival in response to oxidative stress. We have also developed an assay to determine the actin polymerization capacity of total protein extracts using fluorescence recovery after photobleachi...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2009.00565.x

    authors: Pujol N,Bonet C,Vilella F,Petkova MI,Mozo-Villarías A,de la Torre-Ruiz MA

    更新日期:2009-12-01 00:00:00

  • Loss of Zhf and the tightly regulated zinc-uptake system SpZrt1 in Schizosaccharomyces pombe reveals the delicacy of cellular zinc balance.

    abstract::Abstract Zinc is an essential micronutrient, and yet it can be toxic when present in excess. Zinc acquisition and distribution are dependent on tightly controlled transport of Zn(2+) ions. Schizosaccharomyces pombe represents a second eukaryotic model to study cellular metal homeostasis. In several ways its micronutri...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2008.00414.x

    authors: Boch A,Trampczynska A,Simm C,Taudte N,Krämer U,Clemens S

    更新日期:2008-09-01 00:00:00

  • Candida species fail to produce the immunosuppressive secondary metabolite gliotoxin in vitro.

    abstract::Yeasts of the genus Candida are a major cause of morbidity and mortality in immunocompromised patients. Despite new insights in recent years, the pathogenesis of Candida infection is still incompletely understood. Previous studies have suggested that gliotoxin, a secondary fungal metabolite with well-known immunosuppr...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2007.00256.x

    authors: Kupfahl C,Ruppert T,Dietz A,Geginat G,Hof H

    更新日期:2007-09-01 00:00:00

  • Anaerobic homolactate fermentation with Saccharomyces cerevisiae results in depletion of ATP and impaired metabolic activity.

    abstract::Conversion of glucose to lactic acid is stoichiometrically equivalent to ethanol formation with respect to ATP formation from substrate-level phosphorylation, redox equivalents and product yield. However, anaerobic growth cannot be sustained in homolactate fermenting Saccharomyces cerevisiae. ATP-dependent export of t...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2009.00506.x

    authors: Abbott DA,van den Brink J,Minneboo IM,Pronk JT,van Maris AJ

    更新日期:2009-05-01 00:00:00

  • The Shu complex is a conserved regulator of homologous recombination.

    abstract::Homologous recombination (HR) is an error-free DNA repair mechanism that maintains genome integrity by repairing double-strand breaks (DSBs). Defects in HR lead to genomic instability and are associated with cancer predisposition. A key step in HR is the formation of Rad51 nucleoprotein filaments which are responsible...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fow073

    authors: Martino J,Bernstein KA

    更新日期:2016-09-01 00:00:00

  • Physiology of Saccharomyces cerevisiae strains isolated from Brazilian biomes: new insights into biodiversity and industrial applications.

    abstract::Fourteen indigenous Saccharomyces cerevisiae strains isolated from the barks of three tree species located in the Atlantic Rain Forest and Cerrado biomes in Brazil were genetically and physiologically compared to laboratory strains and to strains from the Brazilian fuel ethanol industry. Although no clear correlation ...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fow076

    authors: Beato FB,Bergdahl B,Rosa CA,Forster J,Gombert AK

    更新日期:2016-11-01 00:00:00

  • Neither 1G nor 2G fuel ethanol: setting the ground for a sugarcane-based biorefinery using an iSUCCELL yeast platform.

    abstract::First-generation (1G) fuel ethanol production in sugarcane-based biorefineries is an established economic enterprise in Brazil. Second-generation (2G) fuel ethanol from lignocellulosic materials, though extensively investigated, is currently facing severe difficulties to become economically viable. Some of the challen...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/foaa027

    authors: Bermejo PM,Raghavendran V,Gombert AK

    更新日期:2020-06-01 00:00:00

  • Pkc1 and actin polymerisation activities play a role in ribosomal gene repression associated with secretion impairment caused by oxidative stress.

    abstract::In Saccharomyces cerevisiae, the cell integrity pathway plays a role in the oxidative stress response. In this study, we show that the Pkc1 protein mediates oxidative signalling by helping to downregulate ribosomal gene expression when cells are exposed to hydrogen peroxide. An active actin cytoskeleton is required fo...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2011.00754.x

    authors: Mitjana FV,Petkova MI,Pujol-Carrion N,de la Torre-Ruiz MA

    更新日期:2011-12-01 00:00:00

  • Astaxanthin biosynthesis is enhanced by high carotenogenic gene expression and decrease of fatty acids and ergosterol in a Phaffia rhodozyma mutant strain.

    abstract::An astaxanthin-overproducing (∼1000 μg g(-1)) strain of Phaffia rhodozyma, termed MK19, was established through 1-methyl-3-nitro-1-nitrosoguanidine and Co60 mutagenesis from wild-type JCM9042 (merely 35-67 μg g(-1)). The total fatty acid content of MK19 was much lower than that of the wild type. Possible causes of the...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/j.1567-1364.2010.00705.x

    authors: Miao L,Chi S,Tang Y,Su Z,Yin T,Guan G,Li Y

    更新日期:2011-03-01 00:00:00

  • XYLH encodes a xylose/H+ symporter from the highly related yeast species Debaryomyces fabryi and Debaryomyces hansenii.

    abstract::The closely related yeasts Debaryomyces fabryi and Debaryomyces hansenii are excellent xylose consumers. We previously described the activity of a high-affinity xylose/H(+) symport from an industrial strain of D. hansenii subsequently reclassified as D. fabryi. We now report the identification of the gene encoding thi...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1111/1567-1364.12061

    authors: Ferreira D,Nobre A,Silva ML,Faria-Oliveira F,Tulha J,Ferreira C,Lucas C

    更新日期:2013-11-01 00:00:00

  • Physical interaction between Sit1 and Aft1 upregulates FOB uptake activity by inhibiting protein degradation of Sit1 in Saccharomyces cerevisiae.

    abstract::Previously, we reported that Aft1 regulates Sit1 by modulating the ubiquitination of Sit1 in Saccharomyces cerevisiae. Here, we report the function of the physical interaction between Sit1 and Aft1 in ferrioxamine B (FOB) uptake. The interaction between Sit1 and Aft1 induced protein localization of Sit1 to the plasma ...

    journal_title:FEMS yeast research

    pub_type: 杂志文章

    doi:10.1093/femsyr/fov080

    authors: Kang CM,Kang S,Park YS,Yun CW

    更新日期:2015-11-01 00:00:00