Restriction primers as short as 6-mers for PCR amplification of bacterial and plant genomic DNA and plant viral RNA.

Abstract:

:Amplification of DNA or RNA sequences using the polymerase chain reaction (PCR) or reverse transcriptase PCR (RT-PCR) requires primers of an appropriate length to be designed. Two hexamer restriction primers, denoted as E101 and H301, which correspond to sequences of EcoRI and HindIII recognition sites, respectively, were selected and used as primers in PCR and RT-PCR. We first applied the restriction primers to the plasmid DNA and bacterial (Pseudomonas) and plant (Cymbidium) genomic DNAs. We observed positive DNA amplifications with the recombinant plasmid DNA and bacterial and plant genomic DNAs. Purified viral RNA was used for template in the RT-PCR with the primers and successful DNA amplification was obtained. These results suggest that the 6-mer restriction primers can be useful for new applications in PCR.

journal_name

Mol Biotechnol

journal_title

Molecular biotechnology

authors

Ryu KH,Choi SH,Lee JS

doi

10.1385/MB:14:1:01

keywords:

subject

Has Abstract

pub_date

2000-01-01 00:00:00

pages

1-3

issue

1

eissn

1073-6085

issn

1559-0305

pii

MB:14:1:01

journal_volume

14

pub_type

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