Chromosome localization and genomic structure of the KiSS-1 metastasis suppressor gene (KISS1).

Abstract:

:The identification and sequence of KiSS-1 (HGMW-approved symbol, KISS1), a human malignant melanoma metastasis-suppressor gene, was recently published. In this report, we present a corrected genomic sequence, genomic structure, and refined chromosomal location for KiSS-1. The genomic organization of the sequence reveals a gene consisting of four exons. The first two exons are not translated; the third exon contains 38 5' noncoding bases followed by the translational start site and another 100 translated bases. The terminal exon contains a further 332 translated bases, the translational stop codon, and the polyadenylation signal. The gene maps to chromosome 1q32 as determined by radiation hybrid mapping and FISH analysis. The relatively simple organization of this gene will facilitate analyses for mutations and abnormal expression in human tumors.

journal_name

Genomics

journal_title

Genomics

authors

West A,Vojta PJ,Welch DR,Weissman BE

doi

10.1006/geno.1998.5566

subject

Has Abstract

pub_date

1998-11-15 00:00:00

pages

145-8

issue

1

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(98)95566-5

journal_volume

54

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • The human cystathionine beta-synthase (CBS) gene: complete sequence, alternative splicing, and polymorphisms.

    abstract::Cystathionine beta-synthase [CBS; l-serine hydro-lyase (adding homocysteine), EC 4.2.1.22] catalyzes the first committed step of transsulfuration and is the enzyme deficient in classical homocystinuria. In this report, we describe the molecular cloning and the complete nucleotide sequence of the human CBS gene. We rep...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5437

    authors: Kraus JP,Oliveriusová J,Sokolová J,Kraus E,Vlcek C,de Franchis R,Maclean KN,Bao L,Bukovsk,Patterson D,Paces V,Ansorge W,Kozich V

    更新日期:1998-09-15 00:00:00

  • Sequence of human glucose-6-phosphate dehydrogenase cloned in plasmids and a yeast artificial chromosome.

    abstract::The sequence of 20,114 bp of DNA including the human glucose-6-phosphate dehydrogenase (G6PD) gene was determined. The region included a prominent CpG island, starting about 680 nucleotides upstream of the transcription start site, extending about 1050 nucleotides downstream of the start site, and ending just at the s...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90465-q

    authors: Chen EY,Cheng A,Lee A,Kuang WJ,Hillier L,Green P,Schlessinger D,Ciccodicola A,D'Urso M

    更新日期:1991-07-01 00:00:00

  • YY1-dependent transcriptional regulation of the human GDAP1 gene.

    abstract::Charcot-Marie-Tooth disease (CMT) is a heritable neurodegenerative condition, some types of which (notably CMT4A) are caused by mutations in the GDAP1 gene that encodes a protein of unknown molecular function implicated in regulation of mitochondrial fission. Here we present for the first time a functional analysis of...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2009.08.014

    authors: Ratajewski M,Pulaski L

    更新日期:2009-12-01 00:00:00

  • The human lamin B receptor/sterol reductase multigene family.

    abstract::LBR (lamin B receptor) is an integral protein of the inner nuclear membrane encoded by a gene on human chromosome 1q42.1. LBR has a nucleoplasmic, amino-terminal domain of approximately 200 amino acids followed by a carboxyl-terminal domain similar in sequence to yeast and plant sterol reductases. We have determined t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5615

    authors: Holmer L,Pezhman A,Worman HJ

    更新日期:1998-12-15 00:00:00

  • Convenient and quantitative determination of the frequency of a mutant allele using solid-phase minisequencing: application to aspartylglucosaminuria in Finland.

    abstract::Aspartylglucosaminuria (AGU) is a recessively inherited lysosomal disease caused by inadequate aspartylglucosaminidase (AGA) activity. The disease is prevalent in the genetically isolated Finnish population. We have used a new method, solid-phase minisequencing, to determine the frequency of two missense mutations in ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90452-x

    authors: Syvänen AC,Ikonen E,Manninen T,Bengtström M,Söderlund H,Aula P,Peltonen L

    更新日期:1992-03-01 00:00:00

  • Localization of the properdin structural locus to Xp11.23-Xp21.1.

    abstract::Properdin is a serum protein belonging to the alternative pathway of complement activation whose absence is often associated with fatal bacterial infections. Properdin deficiency segregates with an X-linked recessive pattern and its position has been recently refined by genetic linkage analysis to the proximal part of...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90085-2

    authors: Goundis D,Holt SM,Boyd Y,Reid KB

    更新日期:1989-07-01 00:00:00

  • Genome classification improvements based on k-mer intervals in sequences.

    abstract::Given the vast amount of genomic data, alignment-free sequence comparison methods are required due to their low computational complexity. k-mer based methods can improve comparison accuracy by extracting an effective feature of the genome sequences. The aim of this paper is to extract k-mer intervals of a sequence as ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2018.11.001

    authors: Han GB,Cho DH

    更新日期:2019-12-01 00:00:00

  • Quantitative determination of gene strand bias in prokaryotic genomes.

    abstract::Comparative genometrics of microorganisms is a relatively new area, in which genome properties are translated into numerical indexes. Such indexes can be used for a comprehensive and comparative analysis of microbial genomes, contributing to the understanding of their evolution. This work presents a new method for qua...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.07.010

    authors: de Carvalho MO,Ferreira HB

    更新日期:2007-12-01 00:00:00

  • YAC mapping by FISH using Alu-PCR-generated probes.

    abstract::Human genomic mapping has been greatly advanced by the independent development of three new methods: large DNA fragment cloning in yeast artificial chromosomes, amplification from complex DNAs of human specific segments by Alu-PCR, and high-resolution localization of complex DNA probes by fluorescent in situ hybridiza...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90148-l

    authors: Breen M,Arveiler B,Murray I,Gosden JR,Porteous DJ

    更新日期:1992-07-01 00:00:00

  • Transcriptional and epigenetic status of protamine 1 and 2 genes following round spermatids injection into mouse oocytes.

    abstract::The use of round spermatids that are fully active at the transcriptional level to create zygotes (i.e. round spermatid injection; ROSI) raises the question regarding the downregulation of all specific genes that are transcribed from the paternal genome at fertilization. In this study, we show that protamine 1 and 2 mR...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.12.004

    authors: Borghol N,Blachère T,Lefèvre A

    更新日期:2008-05-01 00:00:00

  • Multiple functional copies of the RBM gene family, a spermatogenesis candidate on the human Y chromosome.

    abstract::The RBM (RNA-binding motif) gene family on the human Y chromosome encodes proteins with an RNA-binding domain. Its exclusive expression in germ cells and its partial deletion in some azoospermic or severely oligospermic males provide evidence of a role for RBM genes in spermatogenesis. There are approximately 30 RBM g...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4944

    authors: Chai NN,Salido EC,Yen PH

    更新日期:1997-10-15 00:00:00

  • Linkage mapping of human chromosome 10 microsatellite polymorphisms.

    abstract::Ten microsatellite DNA polymorphisms located on human chromosome 10 were regionally mapped using subchromosomal somatic cell hybrids and linkage analysis. The resulting order of the markers from pter-qter was [D10S89, D10S111], D10S107, D10S109, [D10S91, D10S110, D10S108, D10S88, D10S168], and D10S169. Order of the ma...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90455-2

    authors: Decker RA,Moore J,Ponder B,Weber JL

    更新日期:1992-03-01 00:00:00

  • Structural analysis of the HLA-A/HLA-F subregion: precise localization of two new multigene families closely associated with the HLA class I sequences.

    abstract::Positional cloning strategies for the hemochromatosis gene have previously concentrated on a target area restricted to a maximum genomic expanse of 400 kb around the HLA-A and HLA-F loci. Recently, the candidate region has been extended to 2-3 Mb on the distal side of the MHC. In this study, 10 coding sequences [hemoc...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0110

    authors: Pichon L,Carn G,Bouric P,Giffon T,Chauvel B,Lepourcelet M,Mosser J,Legall JY,David V

    更新日期:1996-03-01 00:00:00

  • Genetic analysis of human type 1 protein phosphatase inhibitor 2 in insulin-resistant Pima Indians.

    abstract::The rate-limiting enzyme in insulin-mediated nonoxidative glucose disposal, glycogen synthase, has reduced activity in insulin-resistant subjects at risk for developing non-insulin-dependent diabetes mellitus (NIDDM). The synthase-activating enzyme, type 1 protein phosphatase (PP1), also has an abnormally low level of...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4649

    authors: Permana PA,Mott DM

    更新日期:1997-04-01 00:00:00

  • Structure and polymorphism of the mouse myelin/oligodendrocyte glycoprotein gene.

    abstract::We have isolated and characterized genomic clones containing the mouse myelin/oligodendrocyte glycoprotein (MOG) gene. It spans a region of 12.5 kb and consists of eight exons. Its exon-intron structure differs from that of classical MHC-class I genes, with which it is linked in the mouse genome. Nucleotide sequencing...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1456

    authors: Daubas P,Pham-Dinh D,Dautigny A

    更新日期:1994-09-01 00:00:00

  • Transcriptional analysis of a novel cluster of LY-6 family members in the human and mouse major histocompatibility complex: five genes with many splice forms.

    abstract::Lymphocyte antigen-6 (LY-6) superfamily members are cysteine-rich, generally GPI-anchored cell surface proteins, which have definite or putative immune related roles. A cluster of five potential LY-6 superfamily members is located in the human and mouse major histocompatibility complex class III region. Comparative an...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2002.6794

    authors: Mallya M,Campbell RD,Aguado B

    更新日期:2002-07-01 00:00:00

  • Delineation of 7q11.2 deletions associated with Williams-Beuren syndrome and mapping of a repetitive sequence to within and to either side of the common deletion.

    abstract::The majority of Williams-Beuren syndrome (WBS) patients have been shown to have a microdeletion within 7q11.2 including the elastin gene locus. The extent of these deletions has, however, not been well characterized. Thirty-five deletion patients were tested for all polymorphic markers in the 7q11.2 region bounding EL...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0237

    authors: Robinson WP,Waslynka J,Bernasconi F,Wang M,Clark S,Kotzot D,Schinzel A

    更新日期:1996-05-15 00:00:00

  • An integrated gene and SSLP BAC map framework of mouse chromosome 11.

    abstract::Physical maps are important resources both in sequencing and in functional analyses of large genomes. Global contig-building approaches are regarded to be more efficient relative to the cumulative outcome of scattered and more localized physical mapping studies accompanying positional cloning. This work is part of an ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.5973

    authors: Klysik J,Cai WW,Yang C,Bradley A

    更新日期:1999-11-15 00:00:00

  • Physical and genetic maps for chromosome 10.

    abstract::A fluorescence in situ hybridization (FISH) physical map of 14 polymorphic loci on chromosome 10 covers over 62% of the fractional length of chromosome 10. The positions of three previously mapped loci are confirmed, nine more are refined, and two new loci are cytogenetically mapped. The order of loci determined by FI...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1192

    authors: Lichter JB,Difilippantonio MJ,Pakstis AJ,Goodfellow PJ,Ward DC,Kidd KK

    更新日期:1993-05-01 00:00:00

  • Organization of the human beta-adducin gene (ADD2).

    abstract::The intron-exon organization of the human beta-adducin gene (ADD2) has been determined from overlapping genomic clones. The gene spans over 100 kb on chromosome 2p13 and comprises 17 exons. Seven of the exons are identical in size to the corresponding exons of the alpha-adducin gene (4p16.3), suggesting gene duplicati...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4802

    authors: Gilligan DM,Lozovatsky L,Silberfein A

    更新日期:1997-07-15 00:00:00

  • CLAN, a novel human CED-4-like gene.

    abstract::Proteins governing cell death form the basis of many normal processes and contribute to the pathogenesis of many diseases when dysregulated. Here we report the cloning of a novel human CED-4-like gene, CLAN, and several of its alternatively spliced isoforms. These caspase-associated recruitment domain (CARD)-containin...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2001.6579

    authors: Damiano JS,Stehlik C,Pio F,Godzik A,Reed JC

    更新日期:2001-07-01 00:00:00

  • Genome-wide identification and expression profiling of cytosine-5 DNA methyltransferases during drought and heat stress in wheat (Triticum aestivum).

    abstract::DNA methylation is a potential epigenetic mechanism that regulates genome stability, development, and stress mitigation in plants. It is mediated by cytosine-5 DNA methyltransferases (C5-MTases). We identified 52 wheat C5-MTases; and based on domain structure and phylogenetics, these 52 C5-MTases were classified into ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.08.031

    authors: Gahlaut V,Samtani H,Khurana P

    更新日期:2020-11-01 00:00:00

  • Single-strand conformational polymorphism (SSCP) mapping of the mouse genome: integration of the SSCP, microsatellite, and gene maps of mouse chromosome 1.

    abstract::Interspersed repetitive sequence (IRS) PCR and repetitive element-to-bubble (IRS-bubble) PCR have been utilized to rapidly generate large numbers of mouse-specific, chromosome 1-enriched STSs from mouse-hamster somatic cell hybrids. Single-strand conformational polymorphism (SSCP) has been used to localize 39 new repe...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(11)80007-8

    authors: Hunter KW,Watson ML,Rochelle J,Ontiveros S,Munroe D,Seldin MF,Housman DE

    更新日期:1993-12-01 00:00:00

  • Bridging expressed sequence alignments through targeted cDNA sequencing.

    abstract::One of the major challenges in genome research is the identification of the complete set of genes in a genome. Alignments of expressed sequences (RNA and EST) with genomic sequences have been used to characterize genes. However, the number of alignments far exceeds the likely number of genes in a genome, suggesting th...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2003.07.003

    authors: Xie H,Diber A,Pollock S,Nemzer S,Safer H,Meloon B,Olson A,Hwang JJ,Endress GA,Savitsky K,Gill-More R

    更新日期:2004-04-01 00:00:00

  • High-resolution mapping of D16led-1, Gart, Gas-4, Cbr, Pcp-4, and Erg on distal mouse chromosome 16.

    abstract::More than 500 backcross progeny from four intersubspecific backcrosses were typed for six markers on distal mouse chromosome 16. Five of these represented genes that mapped within the Sod-1 to Ets-2 interval, which was shown previously to contain the weaver (wv) gene. The map order, including previously mapped referen...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1336

    authors: Mjaatvedt AE,Citron MP,Reeves RH

    更新日期:1993-08-01 00:00:00

  • Methylation of the DXS255 hypervariable locus 5' CCGG site may be affected by factors other than X-chromosome activation status.

    abstract::Differences in the methylation status of certain cytosine residues between active and inactive X chromosomes can be used to determine X-inactivation in females heterozygous for X-linked restriction fragment length polymorphisms. We have studied methylation patterns in 105 females heterozygous at the DXS255 locus by So...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80285-x

    authors: Cachia PG,Culligan DJ,Thomas ED,Whittaker J,Jacobs A,Padua RA

    更新日期:1992-09-01 00:00:00

  • Structure and organization of the human thrombospondin 3 gene (THBS3).

    abstract::The promoter/5' flank sequence, cDNA sequence, and exon/intron structures of the human thrombospondin 3 (THBS3) gene have been determined. THBS3 cDNA clones were obtained by PCR amplification of human fetal lung cDNA using THBS3-specific primers. Analysis of cDNA and genomic sequences showed the THBS3 gene to be compo...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1050

    authors: Adolph KW,Long GL,Winfield S,Ginns EI,Bornstein P

    更新日期:1995-05-20 00:00:00

  • The effect of 5-fluorouracil/leucovorin chemotherapy on CpG methylation, or the confounding role of leukocyte heterogeneity: An illustration.

    abstract::Blood-based epigenome-wide association studies that aim at comparing CpG methylation between colorectal cancer (CRC) patients and controls can lead to the discovery of diagnostic or prognostic biomarkers. Numerous confounders can lead to spurious associations. We aimed to see if 5-fluorouracil (5-FU)/leucovorin chemot...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2015.09.003

    authors: Lemire M,Zaidi SH,Zanke BW,Gallinger S,Hudson TJ,Cleary SP

    更新日期:2015-12-01 00:00:00

  • A PstI polymorphism for the human erythrocyte surface protein band 3 (EPB3) demonstrates close linkage of EPB3 to the nerve growth factor receptor.

    abstract::Erythrocyte surface protein band 3 (EPB3) plays an important role in CO2 transport in the blood. We have isolated a recombinant lambda bacteriophage that contains coding sequence for the human gene. Sequence analysis demonstrated that the human insert contains a portion of exon 13. A 1.1-kb BamHI fragment revealed a t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90034-7

    authors: Stewart EA,Kopito R,Bowcock AM

    更新日期:1989-10-01 00:00:00

  • Transcriptional regulation in eukaryotic ribosomal protein genes.

    abstract::Understanding ribosomal protein gene regulation provides a good avenue for understanding gene regulatory networks. Even after 5 decades of research on ribosomal protein gene regulation, little is known about how higher eukaryotic ribosomal protein genes are coordinately regulated at the transcriptional level. However,...

    journal_title:Genomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ygeno.2007.07.003

    authors: Hu H,Li X

    更新日期:2007-10-01 00:00:00