Analysis of the integration functions of phi304L: an integrase module among corynephages.

Abstract:

:Plasmid p12929 was shown to integrate into the chromosome of Corynebacterium glutamicum RM3 and BL15. The minimal integrating fragment was subsequently defined. The arms flanking the integrated plasmid (attL and attR) were identified, allowing for the determination of the attP and the attB attachment sites. The attB site is located at the 3' end of an ORF presenting 62-78% identity with L19 ribosomal proteins. Integration in the attB site does not result in the inactivation of this gene because its end is also present on the attR arm of the integrated plasmid and is reconstituted. The minimal integrating fragment is 1663 bp long and contains two ORFs. The int ORF was identified as phi304L integrase on the basis of the amino acid homologies it shared with the tyrosine recombinases of the lambda integrase family. Moreover this integrase is highly homologous throughout its sequence with the integrase of phi16 corynephage, the percentage of identity reaching 89% at the NH2 end. The identity also extends upstream of the initiation codon, while both phages are elsewhere nonhomologous. An integrase module was proposed to explain this extensive homology.

journal_name

Virology

journal_title

Virology

authors

Moreau S,Le Marrec C,Blanco C,Trautwetter A

doi

10.1006/viro.1998.9524

subject

Has Abstract

pub_date

1999-03-01 00:00:00

pages

150-9

issue

1

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(98)99524-1

journal_volume

255

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • Studies of influenza haemagglutinin-mediated membrane fusion.

    abstract::A resonance energy transfer assay of membrane fusion developed by P. S. Uster and D. W. Deamer (Biochemistry 24, 1-8 (1985)) was used in a study of influenza haemagglutinin-mediated fusion. The characteristics of fusion and haemolysis by X-31 (H3N2) virus, a number of mutants of X-31 which fuse membranes at higher pH,...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90083-8

    authors: Wharton SA,Skehel JJ,Wiley DC

    更新日期:1986-02-01 00:00:00

  • Comparative analysis of the roles of simian immunodeficiency and bovine leukemia virus matrix proteins in Gag assembly in insect cells.

    abstract::The role of the matrix (MA) domain of simian immunodeficiency virus (SIV) and bovine leukaemia virus (BLV) Gag in the assembly of virus-like particles (VLP) in insect cells has been investigated. Wild-type SIV and BLV Gag assembled to form discrete VLP structures typical of many retroviruses analysed by similar system...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1441

    authors: Kakker NK,Mikhailov MV,Jones IM,Roy P

    更新日期:2002-07-20 00:00:00

  • Identification of human and mouse homologs of the MC51L-53L-54L family of secreted glycoproteins encoded by the Molluscum contagiosum poxvirus.

    abstract::Molluscum contagiosum virus (MCV) is a human poxvirus that produces small, benign skin tumors primarily in young children and encodes proteins that modulate the host immune response. The MC51L, MC53L, and MC54L open reading frames of MCV have significant amino acid sequence similarities and related proteins are encode...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1999.9676

    authors: Xiang Y,Moss B

    更新日期:1999-05-10 00:00:00

  • Antigenic and genetic characterization of Sindbis virus monoclonal antibody escape mutants which define a pathogenesis domain on glycoprotein E2.

    abstract::The Sindbis virus mutant SB-RL, in contrast to its parent, Sindbis strain AR339 (SB), is attenuated in neonatal mice, has an increased rate of penetration in tissue culture cells, and is more sensitive to neutralization by E2-specific monoclonal antibodies (MCAbs) R6 and R13. These phenotypic differences are controlle...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90184-s

    authors: Pence DF,Davis NL,Johnston RE

    更新日期:1990-03-01 00:00:00

  • Genetic variation in rotavirus serotype 4 subtypes.

    abstract::Serotype 4 rotavirus strains have been classified into two antigenic "subtypes" by a solid phase immune electron microscopy technique in which cross-absorbed animal polyclonal immune sera are used as the source of antibodies. The sequences of the gene encoding the outer capsid glycoprotein VP7 from a single serotype 4...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90766-i

    authors: Green KY,Sarasini A,Qian Y,Gerna G

    更新日期:1992-05-01 00:00:00

  • Polyoma virus middle T is essential for virus replication and persistence as well as for tumor induction in mice.

    abstract::A mutant strain of polyoma virus encoding a truncated middle T protein has been studied for its ability to replicate and induce tumors following inoculation into newborn mice. Virus replication in the acute period prior to expected onset of tumors as well as persistence of virus in older animals were followed. The mut...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90247-m

    authors: Freund R,Sotnikov A,Bronson RT,Benjamin TL

    更新日期:1992-12-01 00:00:00

  • Shope papilloma virus DNA is extensively methylated in non-virus-producing neoplasms.

    abstract::The extent of viral DNA methylation in non-virus-producing benign and malignant tumors induced by the Shope (rabbit) papilloma virus was investigated with the two isoschizomeric restriction endonucleases MspI and HpaII. The overall extent of methylation is variable in papillomas and uniformly higher in carcinomas. In ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(83)80007-5

    authors: Wettstein FO,Stevens JG

    更新日期:1983-04-30 00:00:00

  • NS-1 and NS-2 proteins may act synergistically in the cytopathogenicity of parvovirus MVMp.

    abstract::The interaction of parvovirus minute virus of mice (prototype strain, MVMp) with simian virus 40 (SV40)-transformed human cells (NB-E) was investigated by means of transfection with MVMp molecular clones derived from the infectious recombinant plasmid (pMM984). pMM984 inhibits stable transformation of NB-E cells to ge...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90110-d

    authors: Brandenburger A,Legendre D,Avalosse B,Rommelaere J

    更新日期:1990-02-01 00:00:00

  • Nucleotide sequence of the gene encoding infectious laryngotracheitis virus glycoprotein B.

    abstract::The nucleotide sequence of the infectious laryngotracheitis virus (ILTV) gene encoding the 205K complex glycoprotein (gp205) was determined. The gene is contained within a 3-kb EcoRI restriction fragment mapping at approximately map coordinates 0.23 to 0.25 in the UL region of the ILTV genome and is transcribed from r...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90859-a

    authors: Kongsuwan K,Prideaux CT,Johnson MA,Sheppard M,Fahey KJ

    更新日期:1991-09-01 00:00:00

  • Adenoassociated virus type 2-induced inhibition of the human papillomavirus type 18 promoter in transgenic mice.

    abstract::The epithelium of the cervix uteri has been reported to be frequently coinfected with both human papillomaviruses (HPV) and helper virus-dependent adenoassociated viruses (AAV). Seroepidemiological data suggest that AAV infection could inhibit cervical cancer that is caused by specific ("high-risk") types of papilloma...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1256

    authors: Walz CM,Correa-Ochoa MM,Müller M,Schlehofer JR

    更新日期:2002-02-01 00:00:00

  • HIV-1 transgenic rats develop T cell abnormalities.

    abstract::HIV-1 infection leads to impaired antigen-specific T cell proliferation, increased susceptibility of T cells to apoptosis, progressive impairment of T-helper 1 (Th1) responses, and altered maturation of HIV-1-specific memory cells. We have identified similar impairments in HIV-1 transgenic (Tg) rats. Tg rats developed...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2003.12.010

    authors: Reid W,Abdelwahab S,Sadowska M,Huso D,Neal A,Ahearn A,Bryant J,Gallo RC,Lewis GK,Reitz M

    更新日期:2004-03-30 00:00:00

  • Antigenicity and vaccine potential of Marburg virus glycoprotein expressed by baculovirus recombinants.

    abstract::There is no effective vaccine for Marburg virus (MBGV) or any other filovirus, nor enough pertinent information to expedite rational vaccine development. To ascertain some of the minimal requirements for a MBGV vaccine, we determined whether whole inactivated MBGV, or a baculovirus-expressed virion subunit, could be u...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1997.8883

    authors: Hevey M,Negley D,Geisbert J,Jahrling P,Schmaljohn A

    更新日期:1997-12-08 00:00:00

  • Human papillomavirus type 2c is identical to human papillomavirus type 27.

    abstract::Human papillomavirus type 27 (HPV-27) and HPV-2c are isolates of the same virus as judged by genomic sequence identity. In a 400-bp stretch of the long control region and the E6 and L1 genes no changes were found between HPV-27 and HPV-2c whereas 55 changes were found between HPV-27 and HPV-2a. This justifies the elev...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1307

    authors: Chan SY,Tan CH,Delius H,Bernard HU

    更新日期:1994-06-01 00:00:00

  • Delineation of a 16 amino acid sequence that forms a core DNA recognition motif in the Epstein-Barr virus EBNA-1 protein.

    abstract::EBNA-1 is the sole virally specified protein required for replication of the Epstein-Barr virus latency origin and also modulates its own expression. Both of these functions are mediated through specific DNA binding. We created a series of amino acid substitutions across the previously identified DNA-binding domain of...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1669

    authors: Chen MR,Zong J,Hayward SD

    更新日期:1994-12-01 00:00:00

  • Targeting the hepatitis B virus precore antigen with a novel IgNAR single variable domain intrabody.

    abstract::The Hepatitis B virus precore protein is processed in the endoplasmic reticulum (ER) into secreted hepatitis B e antigen (HBeAg), which acts as an immune tolerogen to establish chronic infection. Downregulation of secreted HBeAg should improve clinical outcome, as patients who effectively respond to current treatments...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.12.034

    authors: Walsh R,Nuttall S,Revill P,Colledge D,Cabuang L,Soppe S,Dolezal O,Griffiths K,Bartholomeusz A,Locarnini S

    更新日期:2011-03-01 00:00:00

  • Monoclonal antibody mapping of the envelope glycoprotein of the dengue 2 virus, Jamaica.

    abstract::Although dengue (DEN) virus is the etiologic agent of dengue fever, the most prevalent vector-borne viral disease in the world, precise information on the antigenic structure of the dengue virion is limited. We have prepared a set of murine monoclonal antibodies (MAbs) specific for the envelope (E) glycoprotein of DEN...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9200

    authors: Roehrig JT,Bolin RA,Kelly RG

    更新日期:1998-07-05 00:00:00

  • Latent infection can be established with drastically restricted transcription and replication of the HSV-1 genome.

    abstract::Viral functions essential for the establishment of latent infection in murine sensory neurons in vivo were investigated by employing a herpes simplex virus type 1 (HSV-1) variant (KD6/B11) deleted for expression of the ICP4 gene and therefore unable to replicate. Since the viral DNA persisted in these cells, the laten...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1089

    authors: Sedarati F,Margolis TP,Stevens JG

    更新日期:1993-02-01 00:00:00

  • Hyper-phosphorylation of nsp2-related proteins of porcine reproductive and respiratory syndrome virus.

    abstract::Viruses exploit phosphorylation of both viral and host proteins to support viral replication. In this study, we demonstrate that porcine reproductive and respiratory syndrome virus replicase nsp2, and two nsp2-related -2/-1 frameshifting products, nsp2TF and nsp2N, are hyper-phosphorylated. By mapping phosphorylation ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2020.01.018

    authors: Shang P,Yuan F,Misra S,Li Y,Fang Y

    更新日期:2020-04-01 00:00:00

  • The Rice stripe virus pc4 functions in movement and foliar necrosis expression in Nicotiana benthamiana.

    abstract::The Rice stripe virus (RSV) pc4 has been determined as the viral movement protein (MP). In this study, the pc4 gene was cloned into a movement-deficient Tobacco mosaic virus (TMV). The resulting hybrid TMV-pc4, in addition to spreading cell to cell in Nicotiana tabacum, moved systemically and induced foliar necrosis i...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.01.007

    authors: Zhang C,Pei X,Wang Z,Jia S,Guo S,Zhang Y,Li W

    更新日期:2012-04-10 00:00:00

  • Simian virus 40 T antigen is detected only in cells in the G2 phase of the cell cycle in one group of rat transformants.

    abstract::The relationship between the cell cycle and the presence of the nuclear T antigen in simian virus 40-transformed rat cells independently derived from FR 3T3 cells has been investigated using a fluorescence-activated cell sorter and a combination of stainings for cellular DNA (4',6-diamidine-2-phenylindole dihydrochlor...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(83)80028-2

    authors: Imbert J,Lawrence JJ,Birg F

    更新日期:1983-04-30 00:00:00

  • Identification and characterization of a murine cytomegalovirus gene with homology to the UL25 open reading frame of human cytomegalovirus.

    abstract::Monoclonal antibody 1B4, previously shown to be protective in vivo and to cross-react with both virally encoded and normal host cell proteins, was used to screen a lambda gt11 cDNA derived from mRNA harvested from mouse embryo fibroblasts 24 hr after infection with murine cytomegalovirus (MCMV). A 700-bp cDNA was iden...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1227

    authors: Dallas PB,Lyons PA,Hudson JB,Scalzo AA,Shellam GR

    更新日期:1994-05-01 00:00:00

  • The nucleotide sequence of apple stem grooving capillovirus genome.

    abstract::The complete nucleotide sequence of apple stem grooving virus (ASGV) genome has been determined. The genome is 6496 nucleotides in length excluding a 3'-terminal poly(A) tail and contains two overlapping open reading frames (ORFs). ORF1 begins at nucleotide position 37 and is terminated at position 6341, encoding a pr...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90170-t

    authors: Yoshikawa N,Sasaki E,Kato M,Takahashi T

    更新日期:1992-11-01 00:00:00

  • Phenotypic and functional characterization of CD8(+) T cell clones specific for a mouse cytomegalovirus epitope.

    abstract::A series of CD8(+) T cell clones, specific for the IE1 epitope YPHFMPTNL, of the immediate-early protein 1 of the murine cytomegalovirus (MCMV) were generated in order to determine their protective activity against this infection and correlate their phenotypic markers with antiviral activity. We found that the adoptiv...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9575

    authors: Fernandez JA,Zavala F,Tsuji M

    更新日期:1999-03-01 00:00:00

  • Characterization of monoclonal antibodies to the Autographa californica nuclear polyhedrosis virus.

    abstract::Mouse hybridomas which produce monoclonal antibodies to the Autographa californica nuclear polyhedrosis virus (AcNPV) have been prepared and the protein to which each is directed has been determined. The antibody produced by clones 3F3 and 5E9 specifically bound polyhedron protein of MW 32,000 when used in immunoadsor...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(82)90241-0

    authors: Roberts PL,Naser W

    更新日期:1982-10-30 00:00:00

  • Hexagonal organization of Moloney murine leukemia virus capsid proteins.

    abstract::To help elucidate the mechanisms by which retrovirus structural proteins associate to form virus particles, we have examined membrane-bound assemblies of Moloney murine leukemia virus (M-MuLV) capsid (CA) proteins. Electron microscopy and image reconstruction techniques showed that CA dimers appear to function as orga...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1452

    authors: Mayo K,McDermott J,Barklis E

    更新日期:2002-06-20 00:00:00

  • Subtype-specific conservation of isoleucine 309 in the envelope V3 domain is linked to immune evasion in subtype C HIV-1 infection.

    abstract::The V3 region of the HIV-1 envelope (Env) glycoprotein gp120 is a key functional domain yet it exhibits distinct mutational patterns across subtypes. Here an invariant residue (Ile 309) was replaced with Leu in 7 subtype C patient-derived Envs from recent infection and 4 related neutralizing antibody escape variants t...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.04.010

    authors: Lynch RM,Rong R,Li B,Shen T,Honnen W,Mulenga J,Allen S,Pinter A,Gnanakaran S,Derdeyn CA

    更新日期:2010-08-15 00:00:00

  • Immunogenicity of JHM virus proteins: characterization of a CD4+ T cell epitope on nucleocapsid protein which induces different T-helper cell subsets.

    abstract::The CD4+ T-cell-restricted recognition of the structural proteins in the JHM strain of MHV (JHMV) was compared between two mouse strains. Following immunization with inactivated JHMV, all proteins elicited an immune response in both C57BL/6 and BALB/c mouse strains, except the nucleocapsid (N) protein, which was not i...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0608

    authors: van der Veen RC

    更新日期:1996-11-15 00:00:00

  • Changes in the antigenicity of the hemagglutinin molecule of H3 influenza virus at acidic pH.

    abstract::In order to determine the location and biological significance of the acid-induced conformational change in influenza virus hemagglutinin (HA) reported by Skehel et al., monoclonal antibodies were prepared to the molecule before and after treatment at pH 5.0. These antibodies together with monoclonal antibodies to the...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(83)80015-4

    authors: Webster RG,Brown LE,Jackson DC

    更新日期:1983-04-30 00:00:00

  • Properties of a new virus belonging to nodaviridae found in larval striped jack (Pseudocaranx dentex) with nervous necrosis.

    abstract::Spherical virus particles were purified from larval striped jack (Pseudocaranx dentex) with nervous necrosis. The virus consists of nonenveloped particles, about 25 nm in diameter, and contains two single-stranded, positive-sense RNA molecules with molecular weights of 1.01 x 10(6)Da (RNA 1) and 0.49 x 10(6)Da (RNA 2)...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90329-n

    authors: Mori K,Nakai T,Muroga K,Arimoto M,Mushiake K,Furusawa I

    更新日期:1992-03-01 00:00:00

  • Lipid selection in the assembly of the phospholipid bilayer membrane of the lipid-containing bacteriophage PR4.

    abstract::Phage PR4 contains a lipid bilayer within the phage protein capsid. The phospholipids of the bilayer are derived from those of the host. We report that phage morphogenesis selects against the unusually bulky phospholipids synthesized by Escherichia coli grown in the presence of various sugar alcohols. These data indic...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1004

    authors: Myung H,Cronan JE Jr

    更新日期:1994-01-01 00:00:00