Isolation and characterization of polymorphic microsatellites in Cocos nucifera L.

abstract：:Alien cytoplasms cause a wide range of phenotypic alterations in the nucleus-cytoplasm (NC) hybrids in the Triticeae. Nuclear genomes of timopheevii wheat (Triticum timopheevii and Triticum araraticum) are fully compatible with the cytoplasm of Aegilops squarrosa, while those of a majority of emmer or durum wheat cult...

journal_title：Genome

authors： Asakura N,Nakamura C,Ohtsuka I

更新日期：1997-04-01 00:00:00

abstract：:Amplified fragment length polymorphism (AFLP) was used to obtain information on the within-species genetic variability of the tobacco cyst-nematode (TCN) complex. AFLP was found to be well suited to this type of study. The current classification of TCN was confirmed. Results indicate that the Globodera tabacum solanac...

journal_title：Genome

authors： Marché L,Valette S,Grenier E,Mugniéry D

更新日期：2001-12-01 00:00:00

abstract：:Eucalyptus globulus subsp. globulus Labill. (Tasmanian Blue Gum), native to southeast Australia, is a benchmark species for the pulp and paper industry. We genotyped 397 trees from 16 populations of E. globulus representing the native diversity in Australia using 24 microsatellite loci. Eight genetically distinct grou...

journal_title：Genome

authors： Costa J,Vaillancourt RE,Steane DA,Jones RC,Marques C

更新日期：2017-09-01 00:00:00

abstract：:Using contiguous genomic DNA sequences of Arabidopsis thaliana, we were able to identify a region of conserved structure in the genome of rice. The conserved, and presumptive homoeologous segments, are 194 kb and 219-300 kb in size in Arabidopsis and rice, respectively. They contain five homologous genes, distinguishe...

journal_title：Genome

authors： van Dodeweerd AM,Hall CR,Bent EG,Johnson SJ,Bevan MW,Bancroft I

更新日期：1999-10-01 00:00:00

abstract：:The combination of two divergent genomes during hybridization can result in "genome shock". Although genome shock has been reported in the hybrids of some herbaceous plants, the pattern and the principle it follows are far from understood, especially in woody plants. Here, the gene expression patterns were remodeled i...

journal_title：Genome

authors： Zhang M,Liu XK,Fan W,Yan DF,Zhong NS,Gao JY,Zhang WJ

更新日期：2018-07-01 00:00:00

abstract：:Multiple-target fluorescence in situ hybridization (FISH) was applied on mitotic chromosomes of seven Lens taxa using two highly repetitive sequences (pLc30 and pLc7) isolated from the cultivated lentil and the multigene families for the 18S-5.8S-25S (pTa71) and 5S rRNA (pTa794) from wheat simultaneously as probes. Th...

journal_title：Genome

authors： Galasso I

更新日期：2003-12-01 00:00:00

abstract：:Genetic diversity in 20 elite blackgram (Vigna mungo (L.) Hepper) genotypes was studied using microsatellite and AFLP markers. Thirty-six microsatellite markers from azuki bean (Vigna angularis (Willd.) Ohwi & Ohashi) were successfully amplified across the 20 blackgram genotypes and 33 microsatellite markers showed po...

journal_title：Genome

authors： Gupta SK,Gopalakrishna T

更新日期：2009-02-01 00:00:00

abstract：:This is the first report of fluorescence in situ hybridization (FISH) on plant polytene chromosomes. Different protease pretreatments have been tested to improve fluorescence in situ hybridization FISH on polytene chromosomes of a plant, Phaseolus coccineus, with the aim to enable the detection of low-copy genes. The ...

journal_title：Genome

authors： Nenno M,Schumann K,Nagl W

更新日期：1994-12-01 00:00:00

abstract：:Distribution, organization, and molecular analysis of four unrelated satellite DNA components in Aveneae species are described. Highly repeated DNA elements were cloned from Helictotrichon convolutum (CON1 and CON2) and Helictotrichon compressum (COM1 and COM2). The lengths of the repeat monomers are 365 bp (CON1), 56...

journal_title：Genome

authors： Grebenstein B,Grebenstein O,Sauer W,Hemleben V

更新日期：1996-12-01 00:00:00

abstract：:Genotyping-by-sequencing (GBS) is a rapid, flexible, low-cost, and robust genotyping method that simultaneously discovers variants and calls genotypes within a broad range of samples. These characteristics make GBS an excellent tool for many applications and research questions from conservation biology to functional g...

journal_title：Genome

authors： Torkamaneh D,Laroche J,Belzile F

更新日期：2020-11-01 00:00:00

abstract：:Post-glacial origins of woodland caribou (Rangifer tarandus subsp.) on the island of Newfoundland and their relationship to mainland populations have been uncertain. Sequence analysis of 2223 bp of the mitochondrial DNA control region and cytochrome b gene from 233 Newfoundland caribou identified 32 haplotypes in four...

journal_title：Genome

authors： Wilkerson CD,Mahoney SP,Carr SM

更新日期：2018-08-01 00:00:00

abstract：:A high-resolution G-banding technique was used to identify five metacentrics that characterize Suncus murinus from Sri Lanka. These metacentrics were shown to be the product of Robertsonian fusion of acrocentric chromosomes identical to those in the standard karyotype defined by M.B. Rogatcheva et al. Two of the metac...

journal_title：Genome

authors： Rogatcheva MB,Borodin PM,Oda SI,Searle JB

更新日期：1997-02-01 00:00:00

abstract：:Brachypodium is well suited as a model system for temperate grasses because of its compact genome and a range of biological features. In an effort to develop resources for genome research in this emerging model species, we constructed 2 bacterial artificial chromosome (BAC) libraries from an inbred diploid Brachypodiu...

journal_title：Genome

authors： Huo N,Gu YQ,Lazo GR,Vogel JP,Coleman-Derr D,Luo MC,Thilmony R,Garvin DF,Anderson OD

更新日期：2006-09-01 00:00:00

abstract：:Basic helix-loop-helix (bHLH) proteins are highly conserved DNA-binding transcription factors of a large superfamily. Animal bHLH proteins play important regulatory roles in various developmental processes such as neurogenesis, myogenesis, heart development, and hematopoiesis. The jewel wasp (Nasonia vitripennis) is a...

journal_title：Genome

authors： Liu XT,Wang Y,Wang XH,Tao XF,Yao Q,Chen KP

更新日期：2014-10-01 00:00:00

abstract：:Configurations of mitochondrial coxI and orfB gene regions were analysed by polymerase chain reaction (PCR) in three wild and one cultivated species of Raphanus. A total of 207 individual plants from 60 accessions were used. PCR with five combinations of primers identified five different amplification patterns both in...

journal_title：Genome

authors： Yamagishi H,Terachi T

更新日期：2003-02-01 00:00:00

abstract：:A Robertsonian polymorphism resulting in diploid chromosome number ranging from 59 to 61 and constant chromosome arm number (fundamental number = 104) was observed in the albino rainbow trout (Oncorhynchus mykiss (Walbaum)) from the yellow color strain. In one individual, 90 mitotic chromosomes and 156 chromosome arms...

journal_title：Genome

authors： Ocalewicz K,Dobosz S

更新日期：2009-04-01 00:00:00

abstract：:Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...

journal_title：Genome

authors： Neilson JA,Durnford DG

更新日期：2010-01-01 00:00:00

abstract：:Lycopersicon esculentum (tomato) has a small genome (2C = 1.90 pg of DNA) packaged in 2n = 2x = 24 small acrocentric to metacentric chromosomes. Like the chromosomes of other members of the family Solanaceae, tomato chromosomes have pericentromeric heterochromatin. To determine the fraction of the tomato genome found ...

journal_title：Genome

authors： Peterson DG,Stack SM,Price HJ,Johnston JS

更新日期：1996-02-01 00:00:00

abstract：:Our goal was to purify and characterize the allelic variants H1b1 and H1b2 of histone H1.b, one of the seven subtypes of this linker histone extracted from Japanese quail erythrocyte nuclei. These variants are revealed phenotypically as band H1.3 or part of band H1.4 by polyacrylamide gel electrophoresis (PAGE) in sod...

journal_title：Genome

authors： Pałyga J,Neelin JM

更新日期：1998-10-01 00:00:00

abstract：:Multiple reaction monitoring mass spectrometry (MRM-MS) is an emerging technology for blood biomarker verification and validation; however, the results may be influenced by pre-analytical factors. This exploratory study was designed to determine if differences in phlebotomy techniques would significantly affect the ab...

journal_title：Genome

authors： Penn AM,Lu L,Chambers AG,Balshaw RF,Morrison JL,Votova K,Wood E,Smith DS,Lesperance M,del Zoppo GJ,Borchers CH,SpecTRA Study Group.

更新日期：2015-12-01 00:00:00

abstract：:The genomic content of the subtelomeric repeated sequences Spelt1 and Spelt52 was studied by dot, Southern, and in situ hybridization in 11 newly synthesized amphiploids of Aegilops and Triticum, and data were compared with the parental plants. Spelt1 had reduced copy numbers in the first generation of three synthetic...

journal_title：Genome

authors： Salina EA,Numerova OM,Ozkan H,Feldman M

更新日期：2004-10-01 00:00:00

abstract：:Paenibacillus terrae NK3-4 is a plant growth-promoting rhizobacterium that may be useful for controlling plant diseases. We conducted a genomic analysis and identified the genes mediating antimicrobial functions. Additionally, an extracellular antifungal protein component was isolated and identified. The draft genome ...

journal_title：Genome

authors： Yu WQ,Zheng GP,Qiu W,Yan FC,Liu WZ,Liu WX

更新日期：2018-10-01 00:00:00

abstract：:The DNA sequencing and preliminary functional analysis of a 32 kb section of yeast chromosome I has been completed. This region lies on the left arm of the chromosome between the LTE1 and SPO7 genes and contains 14 open reading frames (ORFs) positioned closely together, with an average spacing of approximately 350 nuc...

journal_title：Genome

authors： Ouellette BF,Clark MW,Keng T,Storms RK,Zhong W,Zeng B,Fortin N,Delaney S,Barton A,Kaback DB

更新日期：1993-02-01 00:00:00

abstract：:Although little is known about the molecular organization of most genes within heterochromatin, the unusual properties of these chromosomal regions suggest that genes therein may be organized and expressed very differently from those in euchromatin. We report here the cloning, by P transposon tagging, of sequences ass...

journal_title：Genome

authors： Devlin RH,Holm DG,Morin KR,Honda BM

更新日期：1990-06-01 00:00:00

abstract：:A cytobiotaxonomic study of the medically important insect vector Simulium ochraceum s.l. revealed two sibling species and one cytotype from various endemic and nonendemic zones of human onchocerciasis in Guatemala and Mexico. Polytene chromosome maps and idiograms as well as notes on the biology of the three taxa des...

journal_title：Genome

authors： Hirai H,Procunier WS,Ochoa JO,Uemoto K

更新日期：1994-02-01 00:00:00

abstract：:The length variability of the nontranscribed spacer (NTS) of the 5S rDNA repeats was analyzed in species of the genus Lens by means of PCR amplification. The NTS ranged from approximately 227 to approximately 952 bp. The polymorphism detected was higher than previous NTS polymorphisms described in this genus. Three NT...

journal_title：Genome

authors： Fernández M,Ruiz ML,Linares C,Fominaya A,Pérez de la Vega M

更新日期：2005-10-01 00:00:00

abstract：:Cytological descriptions are given for two sympatric sibling species, Simulium praelargum IIIL-st and Simulium praelargum IIIL-1.2, from Darjeeling, West Bengal, India. Sibling IIIL-1.2 differs from IIIL-st by a two step fixed included inversion (IIIL-1.2) found on the long arm of chromosome III. Both siblings possess...

journal_title：Genome

authors： Thapa S,Procunier W,Henry W,Chhetri S

更新日期：2014-04-01 00:00:00

abstract：:We are building a framework physical infrastructure across the soybean genome by using SSR (simple sequence repeat) and RFLP (restriction fragment length polymorphism) markers to identify BACs (bacterial artificial chromosomes) from two soybean BAC libraries. The libraries were prepared from two genotypes, each digest...

journal_title：Genome

authors： Marek LF,Mudge J,Darnielle L,Grant D,Hanson N,Paz M,Huihuang Y,Denny R,Larson K,Foster-Hartnett D,Cooper A,Danesh D,Larsen D,Schmidt T,Staggs R,Crow JA,Retzel E,Young ND,Shoemaker RC

更新日期：2001-08-01 00:00:00

abstract：:A putative old and ubiquitous interspersed DNA repeat family was identified from TaqI restriction, M13 cloning, and sequencing of the genomic DNA of a Mallard (Anas platyrhynchos), a Muscovy Duck (Cairina moschata), a Toulouse Goose (Anser anser), and a Black Swan (Cygnus atratus). A 425-bp consensus core sequence was...

journal_title：Genome

authors： Zhu X,Burgoyne LA,Skinner JD

更新日期：1991-06-01 00:00:00

abstract：:A novel y-type high molecular weight (HMW) glutenin subunit gene from the G genome of Triticum timopheevi (2n=4x=28, AAGG) was isolated and characterized. Genomic DNA from accession CWI17006 was amplified and a 2200 bp fragment was obtained. Sequence analysis revealed a complete open reading frame including N- and C-t...

journal_title：Genome

authors： Li X,Zhang Y,Gao L,Wang A,Ji K,He Z,Appels R,Ma W,Yan Y

更新日期：2007-12-01 00:00:00