PCR-RFLP analysis of the cytochrome b gene in horse mitochondrial DNA.

Abstract:

:The mitochondrial DNA sequence of cytochrome b gene in a Thoroughbred horse was determined. By comparing DNA sequences between the Thoroughbred and published sequence data (two horses and one Grevyi zebra), polymerase chain reaction (PCR) primers were designed for amplification of a 590 bp DNA fragment in the cytochrome b gene, and PCR-restriction fragment length polymorphism (RFLP) analysis was studied in 140 horses of six breeds using three restriction enzymes (AciI, BamHI, RsaI). Two morphs were found using each of the three enzymes. By combining three enzymes morphs, the 140 horses examined were classified into four types. Type 2 was most frequent in all breeds.

journal_name

Anim Genet

journal_title

Animal genetics

authors

Ishida N,Hasegawa T,Oyunsuren T,Mukoyama H

doi

10.1111/j.1365-2052.1996.tb00979.x

subject

Has Abstract

pub_date

1996-10-01 00:00:00

pages

359-63

issue

5

eissn

0268-9146

issn

1365-2052

journal_volume

27

pub_type

杂志文章
  • Polymorphisms in MHC-DRA and -DRB alleles of water buffalo (Bubalus bubalis) reveal different features from cattle DR alleles.

    abstract::Seventy-five individuals of Bubalus bubalis belonging to four different breeds, three of river buffalo and one of swamp buffalo, were studied for polymorphism in MHC DRB (Bubu-DRB) and DRA (Bubu-DRA) loci. Eight alleles of Bubu-DRB were found, and all alleles in the swamp type were shared with the three river breeds. ...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1046/j.1365-2052.2003.00920.x

    authors: Sena L,Schneider MP,Brenig B,Honeycutt RL,Womack JE,Skow LC

    更新日期:2003-02-01 00:00:00

  • The European sea bass: a key marine fish model in the wild and in aquaculture.

    abstract::The European sea bass (Dicentrarchus labrax L.) is a marine fish of key economic and cultural importance in Europe. It is now more an aquaculture than a fisheries species (>96% of the production in 2016), although modern rearing techniques date back only from the late 1980s. It also has high interest for evolutionary ...

    journal_title:Animal genetics

    pub_type: 杂志文章,评审

    doi:10.1111/age.12779

    authors: Vandeputte M,Gagnaire PA,Allal F

    更新日期:2019-06-01 00:00:00

  • A high-resolution radiation hybrid map of porcine chromosome 6.

    abstract::A high-resolution comprehensive map was constructed for porcine chromosome (SSC) 6, where quantitative trait loci (QTL) for reproduction and meat quality traits have been reported to exist. A radiation hybrid (RH) map containing 105 gene-based markers and 15 microsatellite markers was constructed for this chromosome u...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2004.01161.x

    authors: Cao H,Robinson JA,Jiang Z,Melville JS,Golovan SP,Jones MW,Verrinder Gibbins AM

    更新日期:2004-10-01 00:00:00

  • Associations of GH gene variants with performance traits in F2 generations of European wild boar, Piétrain and Meishan pigs.

    abstract::The role of the porcine GH gene was investigated in 292 F2 animals of mating Wild Boar x Piétrain and in 310 F2 animals of mating Meishan x Piétrain. Forty-three traits of fattening, carcass composition, meat quality and stress resistance were recorded. For the analysis of associations between GH gene variants and qua...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.1997.00093.x

    authors: Knorr C,Moser G,Müller E,Geldermann H

    更新日期:1997-04-01 00:00:00

  • Definition of the USDA103 strain of channel catfish (Ictalurus punctatus).

    abstract::Although there are differences in performance between genetic groups of channel catfish, identification and management of these groups is difficult because catfish strains look alike and individuals cannot be tagged efficiently. Thus, US catfish producers have not been able to objectively identify fish from different ...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2007.01586.x

    authors: Waldbieser GC,Wolters WR

    更新日期:2007-04-01 00:00:00

  • Mapping economic trait loci for somatic cell score in Holstein cattle using microsatellite markers and selective genotyping.

    abstract::Marker-assisted selection (MAS) uses genetic marker genotypes to predict an animal's production potential and will provide additional selection information for progeny testing. With the discovery of highly polymorphic microsatellite markers, the tools now exist to begin the search for economic trait loci (ETL), which ...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.1996.tb00484.x

    authors: Ashwell MS,Rexroad CE Jr,Miller RH,VanRaden PM

    更新日期:1996-08-01 00:00:00

  • A PCR-RFLP for KIT associated with tobiano spotting pattern in horses.

    abstract::An MspI polymorphism was identified in intron 13 of the equine homologue of proto-oncogene c-kit (KIT) by comparing DNA sequences from horses with solid coat colour and horses homozygous for the tobiano spotting (To) gene. The allele associated with solid coat colour was designated KM0, while the allele associated wit...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1046/j.1365-2052.2002.00854.x

    authors: Brooks SA,Terry RB,Bailey E

    更新日期:2002-08-01 00:00:00

  • Isolation and sequencing of porcine lipoprotein lipase cDNA and its use in multiallelic restriction fragment length polymorphism detection.

    abstract::Porcine lipoprotein lipase (LPL) cDNA has been cloned and sequenced. The deduced amino acid sequence shows a high degree of identity to LPL from other species, and contains the Ser/His/Asp triade characteristic of serine proteases and esterases. A repetitive element is present in the 3'-untranslated region of the cDNA...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.1992.tb00170.x

    authors: Harbitz I,Kristensen T,Kran S,Davies W

    更新日期:1992-01-01 00:00:00

  • Genetic characterization of biodiversity in highly inbred chicken lines by microsatellite markers.

    abstract::Forty-two microsatellite loci were analysed in 23 highly inbred chicken lines derived from Leghorn, Jungle Fowl, Fayoumi and Spanish breeds. Line-specific alleles among breeds and lines were detected. The band-sharing (BS) values were calculated and the proportion of shared alleles distances (Dps) were estimated. The ...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1046/j.1365-2052.1999.00505.x

    authors: Zhou H,Lamont SJ

    更新日期:1999-08-01 00:00:00

  • Genetic diversity of donkey populations from the putative centers of domestication.

    abstract::Donkey domestication drastically changed ancient transport systems in Africa and Asia, enabling overland circulation of people and goods and influencing the organization of early cities and pastoral societies. Genetic studies based on mtDNA have pointed to the African wild ass as the most probable ancestor of the dome...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12256

    authors: Rosenbom S,Costa V,Al-Araimi N,Kefena E,Abdel-Moneim AS,Abdalla MA,Bakhiet A,Beja-Pereira A

    更新日期:2015-02-01 00:00:00

  • The Burmese cat as a genetic model of type 2 diabetes in humans.

    abstract::The recent extension of genetic tools to the domestic cat, together with the serendipitous consequences of selective breeding, have been essential to the study of the genetic diseases that affect them. Cats are increasingly presented for veterinary surveillance and share many of human's heritable diseases, allowing th...

    journal_title:Animal genetics

    pub_type: 杂志文章,评审

    doi:10.1111/age.12799

    authors: Samaha G,Beatty J,Wade CM,Haase B

    更新日期:2019-08-01 00:00:00

  • Microphthalmia-associated transcription factor mutations are associated with white-spotted coat color in swamp buffalo.

    abstract::A candidate gene analysis of the microphthalmia-associated transcription factor (MITF) gene was used in an attempt to identify the genetic basis for a white-spotted coat color phenotype in the Asian swamp buffalo (Bubalus bubalis carabanensis). Ninety-three buffaloes-32 solid, 38 spotted and 23 white individuals-were ...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12334

    authors: Yusnizar Y,Wilbe M,Herlino AO,Sumantri C,Noor RR,Boediono A,Andersson L,Andersson G

    更新日期:2015-12-01 00:00:00

  • Resistance to malignant catarrhal fever in American bison (Bison bison) is associated with MHC class IIa polymorphisms.

    abstract::The Rhadinovirus ovine herpesvirus-2 (OvHV-2) is the most common causative agent of malignant catarrhal fever (MCF) in clinically susceptible ruminants including cattle and bison. American bison (Bison bison) are highly susceptible to clinical MCF. Nevertheless, approximately 20% of bison on ranches or in feedlots bec...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2007.01575.x

    authors: Traul DL,Li H,Dasgupta N,O'Toole D,Eldridge JA,Besser TE,Davies CJ

    更新日期:2007-04-01 00:00:00

  • QTL detection on porcine chromosome 12 for fatty-acid composition and association analyses of the fatty acid synthase, gastric inhibitory polypeptide and acetyl-coenzyme A carboxylase alpha genes.

    abstract::Refinement of previous QTL on porcine chromosome 12 for fatty-acid composition and a candidate gene association analysis were conducted using an Iberian x Landrace cross. The concentrations of ten fatty acids were assayed in backfat tissue from which four metabolic ratios were calculated for 403 F2 animals. Linkage an...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2007.01668.x

    authors: Muñoz G,Alves E,Fernández A,Ovilo C,Barragán C,Estellé J,Quintanilla R,Folch JM,Silió L,Rodríguez MC,Fernández AI

    更新日期:2007-12-01 00:00:00

  • Polymorphic CAC/T repetitive sequences in the pig genome 1.

    abstract::Three genomic clones were isolated from a size-selected pig DNA library by hybridization with a DNA-fingerprint probe. Analysis at the sequence level revealed that all three clones contain interrupted stretches of triplet repeats mainly composed of CAC and CAT triplets. Evaluation of the corresponding loci for polymor...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.1995.tb02667.x

    authors: Coppieters W,Van de Weghe A,Depicker A,Coppieters J,Peelman L,Van Zeveren A,Bouquet Y

    更新日期:1995-10-01 00:00:00

  • A genome-wide association study for the number of teats in European rabbits (Oryctolagus cuniculus) identifies several candidate genes affecting this trait.

    abstract::In the European rabbit (Oryctolagus cuniculus), a polytocous livestock species, the number of teats indirectly impacts the doe reproduction efficiency and, in turn, the sustainable production of rabbit meat. In this study, we carried out a genome-wide association study (GWAS) for the total number of teats in 247 Itali...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.13036

    authors: Bovo S,Schiavo G,Utzeri VJ,Ribani A,Schiavitto M,Buttazzoni L,Negrini R,Fontanesi L

    更新日期:2021-01-11 00:00:00

  • Isolation and genetic characterization of the porcine apolipoprotein E gene.

    abstract::The present report describes the isolation and genetic characterization of the porcine apolipoprotein E (apo-E) gene. A single positive recombinant phage clone containing a 10.7-kb insert was isolated from a porcine genomic library, and a 4.2-kb fragment was subcloned and sequenced. The 4.2-kb fragment contained the e...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1046/j.1365-2052.1998.00273.x

    authors: Ramsoondar JJ,Rucker EB,Vasquez JC,Gallagher DS,Grimm DR,Lunney JK,Schook LB,Piedrahita JA

    更新日期:1998-02-01 00:00:00

  • Evidence for biogeographic patterning of mitochondrial DNA sequences in Eastern horse populations.

    abstract::Equine mitochondrial DNA (mtDNA) phylogeny reconstruction reveals a complex pattern of variation unlike that seen in other large domesticates. It is likely that this pattern reflects a process of multiple and repeated, although not necessarily independent, domestication events. Until now, no clear geographic affiliati...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2006.01495.x

    authors: McGahern A,Bower MA,Edwards CJ,Brophy PO,Sulimova G,Zakharov I,Vizuete-Forster M,Levine M,Li S,MacHugh DE,Hill EW

    更新日期:2006-10-01 00:00:00

  • Transcriptomic analysis reveals differentially expressed genes associated with wool length in rabbit.

    abstract::Rabbit fur characteristics are primarily genetically determined traits. We used Illumina high-throughput sequencing technology to assess gene expression in the skin tissues of rabbits derived from a cross between Wanxi Angora rabbits and Rex rabbits, which exhibit differential characteristics of short and long wool re...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12701

    authors: Zhao B,Chen Y,Hao Y,Yang N,Wang M,Mei M,Wang J,Qiu X,Wu X

    更新日期:2018-10-01 00:00:00

  • Genetic association of the ACACB gene with milk yield and composition traits in dairy cattle.

    abstract::Previously, we re-sequenced the whole genomes of eight Holstein bulls with high or low milk protein and fat percentage, and we detected two indels in the ACACB (acetyl-CoA carboxylase beta) gene that were polymorphic between the two groups. Thus, we considered ACACB as a promising candidate gene potentially affecting ...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12651

    authors: Han B,Liang W,Liu L,Li Y,Sun D

    更新日期:2018-06-01 00:00:00

  • Single nucleotide polymorphism discovery in albacore and Atlantic bluefin tuna provides insights into worldwide population structure.

    abstract::The optimal management of the commercially important, but mostly over-exploited, pelagic tunas, albacore (Thunnus alalunga Bonn., 1788) and Atlantic bluefin tuna (BFT; Thunnus thynnus L., 1758), requires a better understanding of population structure than has been provided by previous molecular methods. Despite numero...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12051

    authors: Albaina A,Iriondo M,Velado I,Laconcha U,Zarraonaindia I,Arrizabalaga H,Pardo MA,Lutcavage M,Grant WS,Estonba A

    更新日期:2013-12-01 00:00:00

  • Extending the chicken-human comparative map by placing 15 genes on the chicken linkage map.

    abstract::To increase the number of type I loci on the chicken linkage map, chicken genes containing microsatellite sequences (TAn, CAn, GAn, An) were selected from the nucleotide sequence database and primers were developed to amplify the repeats. Initially, 40 different microsatellites located within genes were tested on a pa...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1046/j.1365-2052.1999.00527.x

    authors: Groenen MA,Crooijmans RP,Dijkhof RJ,Acar R,van der Poel JJ

    更新日期:1999-12-01 00:00:00

  • Restriction site heteroplasmy in the mitochondrial DNA of the marine fish Sciaenops ocellatus (L.).

    abstract::Restriction site heteroplasmy involving the enzymes NcoI and XbaI was detected in the mitochondrial DNAs of two individuals of the marine fish Sciaenops ocellatus. This represents only the sixth documented example of mitochondrial DNA restriction site heteroplasmy in animals. Two heteroplasmic individuals were found i...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.1990.tb03241.x

    authors: Gold JR,Richardson LR

    更新日期:1990-01-01 00:00:00

  • Solexa sequencing and custom microRNA chip reveal repertoire of microRNAs in mammary gland of bovine suffering from natural infectious mastitis.

    abstract::Identification of microRNAs (miRNAs), target genes and regulatory networks associated with innate immune and inflammatory responses and tissue damage is essential to elucidate the molecular and genetic mechanisms for resistance to mastitis. In this study, a combination of Solexa sequencing and custom miRNA chip approa...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12628

    authors: Ju Z,Jiang Q,Liu G,Wang X,Luo G,Zhang Y,Zhang J,Zhong J,Huang J

    更新日期:2018-02-01 00:00:00

  • Differentiation of European cattle by AFLP fingerprinting.

    abstract::The Neolithic introduction of domestic cattle into Europe was followed by differential adaptation, selection, migration and genetic isolation, leading ultimately to the emergence of specialized breeds. We have studied the differentiation of European cattle by amplified fragment length polymorphism (AFLP) fingerprintin...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2007.01554.x

    authors: Negrini R,Nijman IJ,Milanesi E,Moazami-Goudarzi K,Williams JL,Erhardt G,Dunner S,Rodellar C,Valentini A,Bradley DG,Olsaker I,Kantanen J,Ajmone-Marsan P,Lenstra JA,European Cattle Genetic Diversity Consortium.

    更新日期:2007-02-01 00:00:00

  • Comparing two commercial domestic dog (Canis familiaris) STR genotyping kits for forensic identity calculations in a mixed-breed dog population sample.

    abstract::Almost half of all US households own a dog (Canis familiaris). Though these household pets can attack humans and other animals, they are also frequently victims of cruelty, neglect and theft. In human-oriented investigations, the tendency of domestic dogs to leave behind physical traces (such as hair) can serve as val...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12758

    authors: Kanthaswamy S,Oldt RF,Montes M,Falak A

    更新日期:2019-02-01 00:00:00

  • Genome screen for twinning rate QTL in four North American Holstein families.

    abstract::The objective of this study was to identify twinning rate quantitative trait loci (QTL) by typing pooled samples in a preliminary screening followed by interval mapping to test QTL effects. Four elite North American Holstein half-sib sire families with high twinning rate predicted transmitting abilities (PTA) were use...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2005.01299.x

    authors: Cobanoglu O,Berger PJ,Kirkpatrick BW

    更新日期:2005-08-01 00:00:00

  • The interleukin 4 receptor gene and its role in recurrent airway obstruction in Swiss Warmblood horses.

    abstract::Recurrent airway obstruction (RAO) in horses is the result of an interaction of genetic and environmental factors and shares many characteristics with human asthma. Many studies have suggested that the interleukin-4 receptor gene (IL4R) is associated with this disease, and a QTL region on chromosome 13 containing IL4R...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2011.02277.x

    authors: Klukowska-Rötzler J,Swinburne JE,Drögemüller C,Dolf G,Janda J,Leeb T,Gerber V

    更新日期:2012-08-01 00:00:00

  • Identification of candidate genes and mutations in QTL regions for immune responses in chicken.

    abstract::There are two categories of immune responses - innate and adaptive immunity - both having polygenic backgrounds and a significant environmental component. In our study, adaptive immunity was represented by the specific antibody response toward keyhole limpet hemocyanin (KLH); innate immunity was represented by natural...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/age.12280

    authors: Siwek M,Slawinska A,Rydzanicz M,Wesoly J,Fraszczak M,Suchocki T,Skiba J,Skiba K,Szyda J

    更新日期:2015-06-01 00:00:00

  • Linkage disequilibrium and historical effective population size in the Thoroughbred horse.

    abstract::Many genomic methodologies rely on the presence and extent of linkage disequilibrium (LD) between markers and genetic variants underlying traits of interest, but the extent of LD in the horse has yet to be comprehensively characterized. In this study, we evaluate the extent and decay of LD in a sample of 817 Thoroughb...

    journal_title:Animal genetics

    pub_type: 杂志文章

    doi:10.1111/j.1365-2052.2010.02092.x

    authors: Corbin LJ,Blott SC,Swinburne JE,Vaudin M,Bishop SC,Woolliams JA

    更新日期:2010-12-01 00:00:00