Correlation of exons with functional domains and folding regions in a cellulase from Agaricus bisporus.

Abstract:

:The cellulase gene cel3 has been isolated from Agaricus bisporus and sequenced. The 5'-end of the cel3 transcript was determined by primer extension and S1 nuclease protection. Putative regulatory elements have been identified in the cel3 promoter and 3'-untranslated regions. The cel3 coding region is interrupted by six short introns, two of which separate the coding regions for the three modules in the CEL3 protein: cellulose-binding domain, linker region, and catalytic domain. Three of the remaining four introns are positioned in regions coding for loops between structural moieties. Intron positions are conserved between cel3 and other related cellulases.

journal_name

Curr Genet

journal_title

Current genetics

authors

Yagüe E,Chow CM,Challen MP,Thurston CF

doi

10.1007/s002940050100

subject

Has Abstract

pub_date

1996-06-01 00:00:00

pages

56-61

issue

1

eissn

0172-8083

issn

1432-0983

journal_volume

30

pub_type

杂志文章
  • Origin and direction of replication in mitochondrial plasmid DNAs of broad bean, Vicia faba.

    abstract::Broad bean (Vicia faba) mitochondrial DNA (mtDNA) includes three circular plasmids: mt-plasmid 1 (1,704 ntp), mt-plasmid 2 (1,695 ntp) and mt-plasmid 3 (1,476 ntp). Partially replicated circular forms of these mt-plasmids have been observed in electron microscope preparations. Restriction enzymes that cleave either mt...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00569340

    authors: Wahleithner JA,Wolstenholme DR

    更新日期:1988-08-01 00:00:00

  • Functional analysis of RNA polymerase II Rpb3 mutants of the fission yeast Schizosaccharomyces pombe.

    abstract::The RNA polymerase II (Pol II) of Schizosaccharomyces pombe is composed of 12 subunits. Subunit Rpb3 has sequence homology with the N-terminal domain of the prokaryotic alpha subunit, which plays a key role in RNA polymerase assembly. Together with the Rpb2 (the beta homologue) and Rpb11 (the second alpha homologue) s...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s002940100203

    authors: Mitobe J,Mitsuzawa H,Ishihama A

    更新日期:2001-06-01 00:00:00

  • Isolation and characterization of yeast mutants with thermoconditional sensitivity to the bifunctional alkylating agent nitrogen mustard.

    abstract::Selection of mutants of Saccharomyces cerevisiae sensitive to the DNA cross-linking agent nitrogen mustard (HN2) at two temperatures (23 °C and 36 °C) yielded two isolates with thermoconditionally enhanced (ts) sensitivity to the mutagen. Both were due to single recessive nuclear genes. Mutant allele snm1-2 (ts) showe...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00365693

    authors: Siede W,Brendel M

    更新日期:1981-11-01 00:00:00

  • Ace2p, a regulator of CTS1 (chitinase) expression, affects pseudohyphal production in Saccharomyces cerevisiae.

    abstract::Some diploid strains of Saccharomyces cerevisiae can grow both as a spherical yeast form and as a filamentous pseudohyphal form. Most yeasts capable of forming pseudohyphae possess a functional FLO8 gene. We show that disrupting the ACE2 transcription factor results in the production of pseudohyphae in a flo8-1 backgr...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s002940050384

    authors: King L,Butler G

    更新日期:1998-09-01 00:00:00

  • Isolation and characterization of additional genes influencing resistance to various mutagens in the yeast Saccharomyces cerevisiae.

    abstract::Screening of a multi-copy vector-based yeast genomic library in haploid cells of wild-type Saccharomyces cerevisiae yielded transformants hyper-resistant to various chemical mutagens. Genetical analysis of the yeast insert DNAs revealed three genes SNG1, SNQ2, and SNQ3 that confer the phenotype hyper-resistance to MNN...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00351689

    authors: Haase E,Servos J,Brendel M

    更新日期:1992-04-01 00:00:00

  • Variety is the spice of life: how to explore a redox-dependent heterogeneity in genomically identical cellular populations.

    abstract::Cellular heterogeneity is a widespread phenomenon, existing across organisms and serving a crucial role in evolution and cell survival. Genetically identical cells may as a result present in a variety of forms with different gene and protein expressions, as well as oxidation level. As a result, a wide range of methodo...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s00294-018-0878-9

    authors: Radzinski M,Reichmann D

    更新日期:2019-02-01 00:00:00

  • The complex Arom locus of Aspergillus nidulans. Evidence for multiple gene fusions and convergent evolution.

    abstract::The physical positions of the DNA sequences encoding the five consecutive enzyme activities required to metabolise 3-deoxy-D-arabino-heptulosonic acid-7-phosphate to 5-enolpyruvyl-shikimate-3phosphate, which are encoded by the A. nidulans Arom polypeptide have been determined. Subfragments of the Arom locus encoding E...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00384611

    authors: Hawkins AR

    更新日期:1987-01-01 00:00:00

  • NRE, the major nitrogen regulatory protein of Penicillium chrysogenum, binds specifically to elements in the intergenic promoter regions of nitrate assimilation and penicillin biosynthetic gene clusters.

    abstract::NRE, the nitrogen regulatory protein of Penicillium chrysogenum, contains a single Cys2/Cys2-type zinc-finger motif followed immediately by a highly basic region. The zinc-finger domain was expressed to Escherichia coli as a fusion protein with beta-galactosidase. In order to test the putative DNA-binding ability of N...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00315785

    authors: Haas H,Marzluf GA

    更新日期:1995-07-01 00:00:00

  • Agrobacterium-mediated gene transfer and enhanced green fluorescent protein visualization in the mycorrhizal ascomycete Tuber borchii: a first step towards truffle genetics.

    abstract::Mycorrhizal ascomycetes are ecologically and commercially important fungi that have proved impervious to genetic transformation so far. We report here on the successful transient transformation of Tuber borchii, an ectomycorrhizal ascomycete that colonizes a variety of trees and produces highly prized hypogeous fruitb...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s00294-005-0579-z

    authors: Grimaldi B,de Raaf MA,Filetici P,Ottonello S,Ballario P

    更新日期:2005-07-01 00:00:00

  • Location and nucleotide sequence of two tRNA genes and a tRNA pseudo-gene in the maize mitochondrial genome: evidence for the transcription of a chloroplast gene in mitochondria.

    abstract::We report the nucleotide sequence of three tRNA genes from maize mitochondria. The genes are located in two BamHI fragments, 3.55 and 5.7 kb long, adjacent to the S2 sequence in the maize mitochondrial genome. On the 3.55 kb BamHI fragment, we have characterized a tRNA(Cys)(GCA) gene. A strong sequence homology of thi...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00387771

    authors: Wintz H,Grienenberger JM,Weil JH,Lonsdale DM

    更新日期:1988-03-01 00:00:00

  • A conserved role of the RSC chromatin remodeler in the establishment of nucleosome-depleted regions.

    abstract::The occupancy of nucleosomes governs access to the eukaryotic genomes and results from a combination of biophysical features and the effect of ATP-dependent remodelling complexes. Most promoter regions show a conserved pattern characterized by a nucleosome-depleted region (NDR) flanked by nucleosomal arrays. The conse...

    journal_title:Current genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s00294-016-0642-y

    authors: Yague-Sanz C,Vázquez E,Sánchez M,Antequera F,Hermand D

    更新日期:2017-05-01 00:00:00

  • Deletions in the cob gene of yeast mtDNA and their phenotypic effect.

    abstract::Two cob- deletion mutants are characterized. One of them, M9410, is deleted for 911 bp of the noncoding sequences only which separate tRNAGlu and cob exon 1; it thus lacks most of the sequence encoding the 957 bp long cob leader (Bonitz et al. 1982) and some 20 bp 5' to it. The end points of this deletion coincide wit...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00365624

    authors: Dobres M,Gerbl-Rieger S,Schmelzer C,Mueller MW,Schweyen RJ

    更新日期:1985-01-01 00:00:00

  • Molecular cloning and analysis of the nuclear gene MRP-L6 coding for a putative mitochondrial ribosomal protein from Saccharomyces cerevisiae.

    abstract::The Saccharomyces cerevisiae nuclear gene MRP-L6 was cloned by complementation of the respiratory-deficient mutant pet-ts 2523 with a library of wild-type yeast genomic DNA. The isolated gene was part of a 3.8-kb sequenced DNA fragment containing, in addition to MRP-L6, two unassigned reading frames, ORF1 and ORF2. MR...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00324677

    authors: Harrer R,Schwank S,Schüller HJ,Schweizer E

    更新日期:1993-07-01 00:00:00

  • Regulation of bacterial gene expression by ribosome stalling and rescuing.

    abstract::Ribosome is responsible for protein synthesis and is able to monitor the sequence and structure of the nascent peptide. Such ability plays an important role in determining overall gene expression profile of the bacteria through ribosome stalling and rescuing. In this review, we briefly summarize our current understand...

    journal_title:Current genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s00294-015-0545-3

    authors: Jin Y,Jin S,Wu W

    更新日期:2016-05-01 00:00:00

  • Molecular cloning of the PEL1 gene of Saccharomyces cerevisiae that is essential for the viability of petite mutants.

    abstract::The PEL1 gene of Saccharomyces cerevisiae is essential for the cell viability of mitochondrial petite mutants, for the ability to utilize glycerol and ethanol on synthetic medium, and for cell growth at higher temperatures. By tetrad analysis the gene was assigned to chromosome III, centromere proximal of LEU2. The PE...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00336781

    authors: Janitor M,Subík J

    更新日期:1993-10-01 00:00:00

  • Rubisco spacer sequence divergence in the rhodophyte alga Gracilaria verrucosa and closely related species.

    abstract::In the red alga Gracilaria verrucosa, the genes encoding the large and the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) are separated by a short spacer of less than 131 bp. Sequencing of PCR-amplified Rubisco spacers from a number of populations of G. verrucosa was performed to assess the...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00309601

    authors: Destombe C,Douglas SE

    更新日期:1991-05-01 00:00:00

  • A termination codon is created by RNA editing in the petunia atp9 transcript.

    abstract::Analysis of the cDNA of the atp9-1 gene transcript from petunia mitochondria has revealed that ten C residues of the gene sequence are edited into U in the mRNA. Seven of these edits result in amino acid changes and one introduces a stop codon before the end of the open reading frame predicted from the gene sequence. ...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00362089

    authors: Wintz H,Hanson MR

    更新日期:1991-01-01 00:00:00

  • A probable cis-regulatory element on yeast mitochondrial DNA responsible for cAMP-mediated transcription.

    abstract::Studies from this laboratory have suggested that mitochondrial (mt) transcription in yeast (Saccharomyces cerevisiae) is governed by changing cellular cAMP levels, and that the mechanism of such transcriptional regulation requires cAMP-dependent protein kinase (PKA) activity; these observations, in turn, suggest a tra...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s002940050161

    authors: Iqbal J,Gérard HC,Rahman MU,Hudson AP

    更新日期:1996-12-01 00:00:00

  • Detection of hyphal fusion in filamentous fungi using differently fluorescence-labeled histones.

    abstract::Cell fusion occurs regularly during the vegetative and sexual phases of the life cycle in filamentous fungi. Here, we present a simple and efficient method that can detect even rare hyphal fusion events. Using the homothallic ascomycete Sordaria macrospora as an experimental system, we developed a histone-assisted mer...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s00294-007-0158-6

    authors: Rech C,Engh I,Kück U

    更新日期:2007-11-01 00:00:00

  • Isolation and genetical and biochemical characterization of mutants resistant to the alkaloid lycorine.

    abstract::Mutants resistant to 200 micrograms/ml of the alkaloid lycorine (LYCR) in non-fermentable substrate were isolated after nitrosoguanidine mutagenesis. Tetrad analysis and growth of heterozygous (LYCR/lycS) diploids from two different mutants revealed that a single nuclear and dominant mutation is responsible for the re...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00420614

    authors: Del Giudice L,Massardo DR,Manna F,Wolf K

    更新日期:1986-01-01 00:00:00

  • The beta-tubulin genes of Drosophila auraria are arranged in a cluster.

    abstract::When the beta 1-, beta 2- and beta 3-tubulin-specific DNAs from Drosophila melanogaster were used as probes to recognize tubulin-specific sequences in the chromosomes of Drosophila auraria, they were found to hybridize to the same polytene band in region 32C of the 2L polytene chromosome. Three overlapping clones were...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00712973

    authors: Scouras ZG,Milioni D,Yiangou M,Duchêne M,Domdey H

    更新日期:1994-01-01 00:00:00

  • Expression of the arylsulphatase reporter gene under the control of the nit1 promoter in Chlamydomonas reinhardtii.

    abstract::In Chlamydomonas reinhardtii, the expression of the nit1 gene encoding nitrate reductase is dependent on the nature of the nitrogen source and on other environmental factors. We have fused the nit1 promoter region to the arylsulphatase (ars) reporter gene lacking its own promoter and introduced this chimeric construct...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s002940050204

    authors: Ohresser M,Matagne RF,Loppes R

    更新日期:1997-03-01 00:00:00

  • The repeatability of genome-wide mutation rate and spectrum estimates.

    abstract::Over the last decade, mutation studies have grown in popularity due to the affordability and accessibility of whole genome sequencing. As the number of species in which spontaneous mutation has been directly estimated approaches 20 across two domains of life, questions arise over the repeatability of results in such e...

    journal_title:Current genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s00294-016-0573-7

    authors: Behringer MG,Hall DW

    更新日期:2016-08-01 00:00:00

  • An efficient cell-free translation system from Aspergillus nidulans and in vitro translocation of prepro-alpha-factor across Aspergillus microsomes.

    abstract::We describe the preparation of an in vitro translation system from heat shock-treated Aspergillus nidulans, capable of supporting efficient and faithful synthesis of proteins from natural and in vitro transcribed eukaryotic messages. In vitro synthesized prepro-alpha-factor was translocated across Aspergillus nidulans...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00434081

    authors: Devchand M,Gwynne D,Buxton FP,Davies RW

    更新日期:1988-12-01 00:00:00

  • FvSNF1, the sucrose non-fermenting protein kinase gene of Fusarium virguliforme, is required for cell-wall-degrading enzymes expression and sudden death syndrome development in soybean.

    abstract::Fusarium virguliforme is a soil-borne pathogenic fungus that causes sudden death syndrome (SDS) in soybean. Its pathogenicity is believed to require the activity of cell-wall-degrading enzymes (CWDEs). The sucrose non-fermenting protein kinase 1 gene (SNF1) is a key component of the glucose de-repression pathway in ye...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/s00294-017-0676-9

    authors: Islam KT,Bond JP,Fakhoury AM

    更新日期:2017-08-01 00:00:00

  • An adaptive response to alkylating agents in Aspergillus nidulans.

    abstract::A simple method is described for demonstrating adaptation to alkylation damage in Aspergillus nidulans. One wild type, two MNNG-sensitive, and one MNNG-resistant strain all showed improvement in colony growth when challenged with MNNG following appropriate inducing pretreatments. Other alkylating agents (MMS, EMS) cou...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00521267

    authors: Hooley P,Shawcross SG,Strike P

    更新日期:1988-11-01 00:00:00

  • Genetic effects of photoactivated psoralens during meiosis in DNA repair mutant pso3-1 of Saccharomyces cerevisiae.

    abstract::The influence of the DNA repair gene PSO3 on photoactivated psoralen-induced meiotic recombination, gene conversion, reverse mutation, and on survival, was assayed in diploid strains of Saccharomyces cerevisiae homozygous for the wild-type or the pso3-1 mutant allele. Sporulation was normal in the pso3-1 diploid. Wild...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00712961

    authors: Pothin HS,da Silva KV,Brendel M,Henriques JA

    更新日期:1994-01-01 00:00:00

  • Identification of an ADPG-dependent trehalose synthase in Saccharomyces.

    abstract::Uridine diphosphoglucose is not the sole donor for trehalose synthesis in yeast cells: an ADPG-dependent trehalose synthase, has been identified in mutant strains with undetectable UDPG-dependent trehalose-6-P synthase activity. Genetic and chromatographic studies indicate that the two activities correspond to differe...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00393399

    authors: Paschoalin VM,Silva JT,Panek AD

    更新日期:1989-08-01 00:00:00

  • Starvation signals in yeast are integrated to coordinate metabolic reprogramming and stress response to ensure longevity.

    abstract::Studies on replicative and chronological aging in Saccharomyces cerevisiae have greatly advanced our understanding of how longevity is regulated in all eukaryotes. Chronological lifespan (CLS) of yeast is defined as the age-dependent viability of non-dividing cell populations. A number of nutrient sensing and signal t...

    journal_title:Current genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s00294-017-0697-4

    authors: Zhang N,Cao L

    更新日期:2017-10-01 00:00:00

  • Developmental and light-dependent cues interact to establish steady-state levels of transcripts for photosynthesis-related genes (psbA, psbD, psaA and rbcL) in rice (Oryza sativa L.).

    abstract::The steady-state transcript levels for psbA, psbD, psaA and rbcL are low in dark-grown rice seedlings as compared to those grown in light. Following seed germination, they accumulate in an age-dependent manner, in dark as well as light, reaching a maximal level on the 7th or 8th day, before a slow decline sets in. But...

    journal_title:Current genetics

    pub_type: 杂志文章

    doi:10.1007/BF00351491

    authors: Kapoor S,Maheshwari SC,Tyagi AK

    更新日期:1994-04-01 00:00:00