Intercellular C-signaling in Myxococcus xanthus involves a branched signal transduction pathway.

Abstract:

:C-factor, the product of the csgA gene, is a cell-surface associated short-range intercellular signaling protein in Myxococcus xanthus. C-factor is required for at least four responses during starvation-induced fruiting body morphogenesis: rippling, aggregation, sporulation, and full expression of the csgA gene, all of which fail in a csgA mutant. To analyze the C-factor signaling pathway, eight Tn5 lac insertion mutants that began but failed to complete fruiting body aggregation were characterized. Seven of the insertions identified genes whose products function in the csgA signaling pathway. The seven mutants were differentially deficient in the C-factor responses, and could be divided into two classes on the basis of those differences. On one hand, the four mutants in class I were deficient in rippling and aggregation, but sporulated and produced C-factor at wild-type levels. The Tn5 lac insertions in the class I mutants mapped to the frz locus, which encodes a signal transduction system that controls the frequency of single cell reversals. On the other hand, mutants carrying any of the three closely linked class II Tn5 lac insertions had deficiencies in all four C-factor responses. Because the sporulation defect in the class 11 mutants is cell autonomous, the data suggest that the primary defect in these mutants is an inability to respond to the C-factor signal. All the data can be explained by a model in which the first part of the C-factor signaling pathway is common to all four C-factor-dependent responses. The genes identified by the class 11 insertions would function in the common part. Downstream of class II, the pathway branches. One branch includes the frz genes and leads to aggregation and rippling; the second branch leads to sporulation and controls the level of csgA gene expression. This model was confirmed in epistasis tests with characterized frz mutations, a csgA null mutation, and a class II mutation.

journal_name

Genes Dev

journal_title

Genes & development

authors

Søgaard-Andersen L,Slack FJ,Kimsey H,Kaiser D

doi

10.1101/gad.10.6.740

subject

Has Abstract

pub_date

1996-03-15 00:00:00

pages

740-54

issue

6

eissn

0890-9369

issn

1549-5477

journal_volume

10

pub_type

杂志文章
  • Nuclear localization of the Arabidopsis APETALA3 and PISTILLATA homeotic gene products depends on their simultaneous expression.

    abstract::The Arabidopsis APETALA3 (AP3) and PISTILLATA (PI) proteins are thought to act as transcription factors and are required for specifying floral organ identities. To define the nuclear localization signals within these proteins, we generated translational fusions of the coding regions of AP3 and PI to the bacterial uidA...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.10.14.1812

    authors: McGonigle B,Bouhidel K,Irish VF

    更新日期:1996-07-15 00:00:00

  • A homeobox gene, PRESSED FLOWER, regulates lateral axis-dependent development of Arabidopsis flowers.

    abstract::It is postulated that the symmetric organization of plant lateral organs is based on two crossed axes, the abaxial-adaxial and the lateral axes. The PRESSED FLOWER (PRS) gene, the expression and function of which are dependent on the lateral axis, is reported in this study. In the prs mutant, growth of the lateral sep...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.931001

    authors: Matsumoto N,Okada K

    更新日期:2001-12-15 00:00:00

  • CSA-dependent degradation of CSB by the ubiquitin-proteasome pathway establishes a link between complementation factors of the Cockayne syndrome.

    abstract::Mutations in the CSA or CSB complementation genes cause the Cockayne syndrome, a severe genetic disorder that results in patients' death in early adulthood. CSA and CSB act in a transcription-coupled repair (TCR) pathway, but their functional relationship is not understood. We have previously shown that CSA is a subun...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.378206

    authors: Groisman R,Kuraoka I,Chevallier O,Gaye N,Magnaldo T,Tanaka K,Kisselev AF,Harel-Bellan A,Nakatani Y

    更新日期:2006-06-01 00:00:00

  • Genomic imprinting of Xist by maternal H3K27me3.

    abstract::Maternal imprinting at the Xist gene is essential to achieve paternal allele-specific imprinted X-chromosome inactivation (XCI) in female mammals. However, the mechanism underlying Xist imprinting is unclear. Here we show that the Xist locus is coated with a broad H3K27me3 domain that is established during oocyte grow...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.304113.117

    authors: Inoue A,Jiang L,Lu F,Zhang Y

    更新日期:2017-10-01 00:00:00

  • The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processing.

    abstract::Piwi-piRNA (Piwi-interacting RNA) ribonucleoproteins (piRNPs) enforce retrotransposon silencing, a function critical for preserving the genome integrity of germ cells. The molecular functions of most of the factors that have been genetically implicated in primary piRNA biogenesis are still elusive. Here we show that M...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.254631.114

    authors: Vourekas A,Zheng K,Fu Q,Maragkakis M,Alexiou P,Ma J,Pillai RS,Mourelatos Z,Wang PJ

    更新日期:2015-03-15 00:00:00

  • Identification of a locus control region in the immunoglobulin heavy-chain locus that deregulates c-myc expression in plasmacytoma and Burkitt's lymphoma cells.

    abstract::In murine plasmacytoma and human Burkitt's lymphoma cells, one allele of c-myc is translocated into one of the immunoglobulin loci, resulting in a characteristic pattern of deregulated c-myc transcription. Translocation events between c-myc and the IgH locus segregate c-myc and the IgH intron enhancer to different rec...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.8.18.2212

    authors: Madisen L,Groudine M

    更新日期:1994-09-15 00:00:00

  • Haploinsufficient lethality and formation of arteriovenous malformations in Notch pathway mutants.

    abstract::The Notch signaling pathway is essential for embryonic vascular development in vertebrates. Here we show that mouse embryos heterozygous for a targeted mutation in the gene encoding the DLL4 ligand exhibit haploinsufficient lethality because of defects in vascular remodeling. We also describe vascular defects in embry...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1239204

    authors: Krebs LT,Shutter JR,Tanigaki K,Honjo T,Stark KL,Gridley T

    更新日期:2004-10-15 00:00:00

  • Senescent cells communicate via intercellular protein transfer.

    abstract::Mammalian cells mostly rely on extracellular molecules to transfer signals to other cells. However, in stress conditions, more robust mechanisms might be necessary to facilitate cell-cell communications. Cellular senescence, a stress response associated with permanent exit from the cell cycle and the development of an...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.259341.115

    authors: Biran A,Perelmutter M,Gal H,Burton DG,Ovadya Y,Vadai E,Geiger T,Krizhanovsky V

    更新日期:2015-04-15 00:00:00

  • The role of disordered protein regions in the assembly of decapping complexes and RNP granules.

    abstract::The removal of the 5' cap structure by the decapping enzyme DCP2 inhibits translation and generally commits the mRNA to irreversible 5'-to-3' exonucleolytic degradation by XRN1. DCP2 catalytic activity is stimulated by DCP1, and these proteins form the conserved core of the decapping complex. Additional decapping fact...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.227843.113

    authors: Jonas S,Izaurralde E

    更新日期:2013-12-15 00:00:00

  • OBP100 binds remarkably degenerate octamer motifs through specific interactions with flanking sequences.

    abstract::We have used the 100-kD HeLa cell octamer-binding protein OBP100 as a model to study flexible DNA sequence recognition by promoter-binding proteins. OBP100 binds to the conserved octamer motif ATGCAAAT found in numerous promoters and additionally to two degenerate octamer motifs (sites I and II) within the SV40 enhanc...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.2.11.1400

    authors: Baumruker T,Sturm R,Herr W

    更新日期:1988-11-01 00:00:00

  • Hairy function as a DNA-binding helix-loop-helix repressor of Drosophila sensory organ formation.

    abstract::Sensory organ formation in Drosophila is activated by proneural genes that encode basic-helix-loop-helix (bHLH) transcription factors. These genes are antagonized by hairy and other proline-bHLH proteins. hairy has not been shown to bind to DNA and has been proposed to form inactive heterodimers with proneural activat...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.8.22.2743

    authors: Ohsako S,Hyer J,Panganiban G,Oliver I,Caudy M

    更新日期:1994-11-15 00:00:00

  • Histone deacetylase 3 (HDAC3) activity is regulated by interaction with protein serine/threonine phosphatase 4.

    abstract::Histone deacetylase 3 (HDAC3) is one of four members of the human class I HDACs that regulates gene expression by deacetylation of histones and nonhistone proteins. Early studies have suggested that HDAC3 activity is regulated by association with the corepressors N-CoR and SMRT. Here we demonstrate that, in addition t...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1286005

    authors: Zhang X,Ozawa Y,Lee H,Wen YD,Tan TH,Wadzinski BE,Seto E

    更新日期:2005-04-01 00:00:00

  • FLOOZY of petunia is a flavin mono-oxygenase-like protein required for the specification of leaf and flower architecture.

    abstract::The mechanisms that determine the relative positions of floral organs, and thereby their numbers, is a poorly understood aspect of flower development. We isolated a petunia mutant, floozy (fzy), in which the formation of floral organ primordia in the outermost three floral whorls and one of the two bracts at the base ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.219502

    authors: Tobeña-Santamaria R,Bliek M,Ljung K,Sandberg G,Mol JN,Souer E,Koes R

    更新日期:2002-03-15 00:00:00

  • Multipotent hematopoietic cells susceptible to alternative double-strand break repair pathways that promote genome rearrangements.

    abstract::Chromosomal translocations are a hallmark of hematopoietic malignancies. The initial molecular events or pathways that lead to translocations in hematopoietic cells are largely unknown, particularly in the stem cell-enriched population postulated to be the initial target for these events. We used in vitro differentiat...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1522807

    authors: Francis R,Richardson C

    更新日期:2007-05-01 00:00:00

  • Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells.

    abstract::Embryonic stem (ES) cells are pluripotent cells with the ability to self-renew indefinitely. These unique properties are controlled by genetic factors and chromatin structure. The exit from the self-renewing state is accompanied by changes in epigenetic chromatin modifications such as an induction in the silencing-ass...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1588207

    authors: Loh YH,Zhang W,Chen X,George J,Ng HH

    更新日期:2007-10-15 00:00:00

  • Context-dependent modulation of Pol II CTD phosphatase SSUP-72 regulates alternative polyadenylation in neuronal development.

    abstract::Alternative polyadenylation (APA) is widespread in neuronal development and activity-mediated neural plasticity. However, the underlying molecular mechanisms are largely unknown. We used systematic genetic studies and genome-wide surveys of the transcriptional landscape to identify a context-dependent regulatory pathw...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.266650.115

    authors: Chen F,Zhou Y,Qi YB,Khivansara V,Li H,Chun SY,Kim JK,Fu XD,Jin Y

    更新日期:2015-11-15 00:00:00

  • A condensin-like dosage compensation complex acts at a distance to control expression throughout the genome.

    abstract::In many species, a dosage compensation complex (DCC) is targeted to X chromosomes of one sex to equalize levels of X-gene products between males (1X) and females (2X). Here we identify cis-acting regulatory elements that target the Caenorhabditis elegans X chromosome for repression by the DCC. The DCC binds to discret...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1751109

    authors: Jans J,Gladden JM,Ralston EJ,Pickle CS,Michel AH,Pferdehirt RR,Eisen MB,Meyer BJ

    更新日期:2009-03-01 00:00:00

  • Structure and mechanism of the RNA polymerase II transcription machinery.

    abstract::RNA polymerase II (Pol II) transcribes all protein-coding genes and many noncoding RNAs in eukaryotic genomes. Although Pol II is a complex, 12-subunit enzyme, it lacks the ability to initiate transcription and cannot consistently transcribe through long DNA sequences. To execute these essential functions, an array of...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.335679.119

    authors: Schier AC,Taatjes DJ

    更新日期:2020-04-01 00:00:00

  • Differential requirements for cell-specific elastase I enhancer domains in transfected cells and transgenic mice.

    abstract::The 134-bp enhancer region of the pancreatic elastase I gene is sufficient to direct pancreatic acinar cell-specific transcription in transgenic mice and in transfected cells in culture. Ten-base-pair scanner mutations in three separate enhancer domains that inactivate enhancer function in transfected pancreatic cells...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.3.5.687

    authors: Swift GH,Kruse F,MacDonald RJ,Hammer RE

    更新日期:1989-05-01 00:00:00

  • Conversion of a gene-specific repressor to a regional silencer.

    abstract::In Saccharomyces cerevisiae, gene silencing at the HMR and HML loci is normally dependent on Sir2p, Sir3p, and Sir4p, which are structural components of silenced chromatin. Sir2p is a NAD+-dependent histone deacetylase required for silencing. Silencing can be restored in cells lacking Sir proteins by a dominant mutati...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.873601

    authors: Rusché LN,Rine J

    更新日期:2001-04-15 00:00:00

  • Purkinje cell protein-2 regulatory regions and transgene expression in cerebellar compartments.

    abstract::The Purkinje cell protein 2 (Pcp-2) is expressed in cerebellar Purkinje cells and retinal bipolar neurons. To illuminate how Pcp-2 expression is restricted to only two neuronal types and to derive tools to express heterologous genes in these neuronal subpopulations, genomic sequences of the mouse Pcp-2 gene have been ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.5.7.1136

    authors: Vandaele S,Nordquist DT,Feddersen RM,Tretjakoff I,Peterson AC,Orr HT

    更新日期:1991-07-01 00:00:00

  • A PP2A regulatory subunit positively regulates Ras-mediated signaling during Caenorhabditis elegans vulval induction.

    abstract::We describe evidence that a regulatory B subunit of protein phosphatase 2A (PP2A) positively regulates an RTK-Ras-MAP kinase signaling cascade during Caenorhabditis elegans vulval induction. Although reduction of sur-6 PP2A-B function causes few vulval induction defects in an otherwise wild-type background, sur-6 PP2A...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.13.19.2562

    authors: Sieburth DS,Sundaram M,Howard RM,Han M

    更新日期:1999-10-01 00:00:00

  • Half helical turn spacing changes convert a frog into a mouse rDNA promoter: a distant upstream domain determines the helix face of the initiation site.

    abstract::Transcription of frog rDNA by mouse cell factors is the only documented exception to the observed species selectivity of rRNA gene expression. This heterologous transcription is authentic in that it uses the normal frog upstream and core promoter domains, as well as the normal mouse polymerase I transcription factors,...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.4.1.52

    authors: Pape LK,Windle JJ,Sollner-Webb B

    更新日期:1990-01-01 00:00:00

  • Control of C. elegans hermaphrodite gonad size and shape by vab-3/Pax6-mediated regulation of integrin receptors.

    abstract::Integrin receptors for extracellular matrix are critical for cell motility, but the signals that determine when to stop are not known. Analysis of distal tip cell (DTC) migration during gonadogenesis in Caenorhabditis elegans has revealed the importance of transcription factor vab-3/Pax6 in regulating the alpha integr...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1534807

    authors: Meighan CM,Schwarzbauer JE

    更新日期:2007-07-01 00:00:00

  • Heartless, a Drosophila FGF receptor homolog, is essential for cell migration and establishment of several mesodermal lineages.

    abstract::A Drosophila FGF receptor homolog (DFGF-R2/DFRI) termed Heartless (Htl) is expressed in the embryonic mesoderm. The phenotypes of null mutant embryos demonstrated that Htl is a central player that is required for the development of several mesodermal lineages. No abnormalities in the primary specification of the mesod...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.10.23.2993

    authors: Beiman M,Shilo BZ,Volk T

    更新日期:1996-12-01 00:00:00

  • A genome-scale analysis of the cis-regulatory circuitry underlying sonic hedgehog-mediated patterning of the mammalian limb.

    abstract::Sonic hedgehog (Shh) signals via Gli transcription factors to direct digit number and identity in the vertebrate limb. We characterized the Gli-dependent cis-regulatory network through a combination of whole-genome chromatin immunoprecipitation (ChIP)-on-chip and transcriptional profiling of the developing mouse limb....

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1693008

    authors: Vokes SA,Ji H,Wong WH,McMahon AP

    更新日期:2008-10-01 00:00:00

  • Inflammation and Hras signaling control epithelial-mesenchymal transition during skin tumor progression.

    abstract::Epithelial-mesenchymal transition (EMT) is thought to be an important, possibly essential, component of the process of tumor dissemination and metastasis. About 20%-30% of Hras mutant mouse skin carcinomas induced by chemical initiation/promotion protocols have undergone EMT. Reduced exposure to TPA-induced chronic in...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.210427.112

    authors: Wong CE,Yu JS,Quigley DA,To MD,Jen KY,Huang PY,Del Rosario R,Balmain A

    更新日期:2013-03-15 00:00:00

  • Caudal, a key developmental regulator, is a DPE-specific transcriptional factor.

    abstract::The regulation of gene transcription is critical for the proper development and growth of an organism. The transcription of protein-coding genes initiates at the RNA polymerase II core promoter, which is a diverse module that can be controlled by many different elements such as the TATA box and downstream core promote...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1698108

    authors: Juven-Gershon T,Hsu JY,Kadonaga JT

    更新日期:2008-10-15 00:00:00

  • Dual Bar homeo box genes of Drosophila required in two photoreceptor cells, R1 and R6, and primary pigment cells for normal eye development.

    abstract::In the Bar mutation of Drosophila, ommatidial differentiation is known to be suppressed in the anterior portion of the eye. Our structural analysis shows that the Bar region contains a pair of homeo box genes, BarH1 and BarH2. These genes encode polypeptides similar in size and sequence and share a common homeo domain...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.6.1.50

    authors: Higashijima S,Kojima T,Michiue T,Ishimaru S,Emori Y,Saigo K

    更新日期:1992-01-01 00:00:00

  • The Rho-linked mental retardation protein oligophrenin-1 controls synapse maturation and plasticity by stabilizing AMPA receptors.

    abstract::Oligophrenin-1 (OPHN1) encodes a Rho-GTPase-activating protein (Rho-GAP) whose loss of function has been associated with X-linked mental retardation (MR). The pathophysiological role of OPHN1, however, remains poorly understood. Here we show that OPHN1 through its Rho-GAP activity plays a critical role in the activity...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1783809

    authors: Nadif Kasri N,Nakano-Kobayashi A,Malinow R,Li B,Van Aelst L

    更新日期:2009-06-01 00:00:00