Abstract:
:RNA viruses within a host exist as dynamic distributions of closely related mutants and recombinant genomes. These closely related mutants and recombinant genomes, which are subjected to a continuous process of genetic variation, competition, and selection, act as a unit of selection, termed viral quasispecies. Characterization of mutant spectra within hosts is essential for understanding viral evolution and pathogenesis resulting from the cooperative behavior of viral mutants within viral quasispecies. Furthermore, a detailed analysis of viral variability within hosts is needed to design control strategies, because viral quasispecies are reservoirs of viral variants that potentially can emerge with increased virulence or altered tropism. In this work, we report a detailed analysis of within-host viral populations in 13 field isolates of the bipartite Tomato chlorosis virus (ToCV) (genus Crinivirus, family Closteroviridae). The intraisolate genetic structure was analyzed based on sequencing data for 755 molecular clones distributed in four genomic regions within the RNA-dependent RNA polymerase (RNA1) and Hsp70h, CP, and CPm (RNA2) open reading frames. Our results showed that populations of ToCV within a host plant have a heterogeneous and complex genetic structure similar to that described for animal and plant RNA viral quasispecies. Moreover, the structures of these populations clearly differ depending on the RNA segment considered, being more complex for RNA1 (encoding replication-associated proteins) than for RNA2 (encoding encapsidation-, systemic-movement-, and insect transmission-relevant proteins). These results support the idea that, in multicomponent RNA viruses, function can generate profound differences in the genetic structures of the different genomic segments.
journal_name
J Viroljournal_title
Journal of virologyauthors
Lozano G,Grande-Pérez A,Navas-Castillo Jdoi
10.1128/JVI.00950-09subject
Has Abstractpub_date
2009-12-01 00:00:00pages
12973-83issue
24eissn
0022-538Xissn
1098-5514pii
JVI.00950-09journal_volume
83pub_type
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pub_type: 杂志文章
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pub_type: 杂志文章
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.69.1.528-533.1995
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pub_type: 杂志文章
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pub_type: 杂志文章
doi:10.1128/jvi.76.12.6370-6375.2002
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.38.1.184-190.1981
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.72.7.5619-5625.1998
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.03004-12
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journal_title:Journal of virology
pub_type: 杂志文章
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journal_title:Journal of virology
pub_type: 杂志文章
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journal_title:Journal of virology
pub_type: 杂志文章
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journal_title:Journal of virology
pub_type: 杂志文章
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.70.1.559-565.1996
更新日期:1996-01-01 00:00:00
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.01786-09
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.02203-14
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journal_title:Journal of virology
pub_type: 杂志文章
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journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.73.5.4316-4326.1999
更新日期:1999-05-01 00:00:00
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pub_type: 杂志文章
doi:10.1128/jvi.74.5.2107-2120.2000
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abstract::The membrane fusion events which initiate human immunodeficiency virus type 1 (HIV-1) infection and promote cytopathic syncytium formation in infected cells commence with the binding of the HIV envelope glycoprotein (Env) to CD4 and an appropriate coreceptor. Here, we show that HIV Env-coreceptor interactions activate...
journal_title:Journal of virology
pub_type: 杂志文章
doi:10.1128/JVI.78.13.7138-7147.2004
更新日期:2004-07-01 00:00:00