Virus mutation frequencies can be greatly underestimated by monoclonal antibody neutralization of virions.

Abstract:

:Monoclonal antibody-resistant mutants have been widely used to estimate virus mutation frequencies. We demonstrate that standard virion neutralization inevitably underestimates monoclonal antibody-resistant mutant genome frequencies of vesicular stomatitis virus, due to phenotypic masking-mixing when wild-type (wt) virions are present in thousandsfold greater numbers. We show that incorporation of antibody into the plaque overlay medium (after virus penetration at 37 degrees C) can provide accurate estimates of genome frequencies of neutral monoclonal antibody-resistant mutant viruses in wt clones. By using this method, we have observed two adjacent G----A base transition frequencies in the I3 epitope to be of the order of 10(-4) in a wt glycine codon. This appears to be slightly lower than the frequencies observed at other sites for total (viable and nonviable) virus genomes when using a direct sequence approach.

journal_name

J Virol

journal_title

Journal of virology

authors

Holland JJ,de la Torre JC,Steinhauer DA,Clarke D,Duarte E,Domingo E

doi

10.1128/JVI.63.12.5030-5036.1989

subject

Has Abstract

pub_date

1989-12-01 00:00:00

pages

5030-6

issue

12

eissn

0022-538X

issn

1098-5514

journal_volume

63

pub_type

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