New perspectives on multilocus ancestry informativeness.

Abstract:

:We present an axiomatic approach for multilocus informativeness measures for determining the amount of information that a set of polymorphic genetic markers provides about individual ancestry. We then reveal several surprising properties of a decision-theoretic based measure that is consistent with the set of proposed criteria for multilocus informativeness. In particular, these properties highlight the interplay between information originating from population priors and the information extractable from the population genetic variants. This analysis then reveals a certain deficiency of mutual information based multilocus informativeness measures when such population priors are incorporated. Finally, we analyse and quantify the inevitable inherent decrease in informativeness due to learning from finite population samples.

journal_name

Math Biosci

journal_title

Mathematical biosciences

authors

Tal O,Tran TD

doi

10.1016/j.mbs.2018.10.011

subject

Has Abstract

pub_date

2018-12-01 00:00:00

pages

60-81

eissn

0025-5564

issn

1879-3134

pii

S0025-5564(18)30164-0

journal_volume

306

pub_type

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