Top value platform chemicals: bio-based production of organic acids.

Abstract:

:Driven by the quest for sustainability, recent years have seen a tremendous progress in bio-based production routes from renewable raw materials to commercial goods. Particularly, the production of organic acids has crystallized as a competitive and fast-evolving field, related to the broad applicability of organic acids for direct use, as polymer building blocks, and as commodity chemicals. Here, we review recent advances in metabolic engineering and industrial market scenarios with focus on organic acids as top value products from biomass, accessible through fermentation and biotransformation.

journal_name

Curr Opin Biotechnol

authors

Becker J,Lange A,Fabarius J,Wittmann C

doi

10.1016/j.copbio.2015.08.022

subject

Has Abstract

pub_date

2015-12-01 00:00:00

pages

168-75

eissn

0958-1669

issn

1879-0429

pii

S0958-1669(15)00121-4

journal_volume

36

pub_type

杂志文章,评审
  • Total internal reflection fluorescence microscopy: technical innovations and novel applications.

    abstract::Recent years have seen the introduction of novel techniques and applications of total internal reflection fluorescence microscopy (TIRFM). Key technical achievements include miniaturization, enhanced depth resolution, reduction of detection volumes and the combination of TIRFM with other microscopic techniques. Novel ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2004.12.004

    authors: Schneckenburger H

    更新日期:2005-02-01 00:00:00

  • Microfabricated reaction and separation systems.

    abstract::Over the past year there have been a number of recent advances in the fields of miniaturized reaction and separation systems, including the construction of fully integrated 'lab-on-a-chip' systems. Microreactors, which initially targeted DNA-based reactions such as the polymerase chain reaction, are now used in severa...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(00)00166-x

    authors: Krishnan M,Namasivayam V,Lin R,Pal R,Burns MA

    更新日期:2001-02-01 00:00:00

  • Functional genomics in Arabidopsis: large-scale insertional mutagenesis complements the genome sequencing project.

    abstract::The ultimate goal of genome research on the model flowering plant Arabidopsis thaliana is the identification of all of the genes and understanding their functions. A major step towards this goal, the genome sequencing project, is nearing completion; however, functional studies of newly discovered genes have not yet ke...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(00)00075-6

    authors: Parinov S,Sundaresan V

    更新日期:2000-04-01 00:00:00

  • Engineering approaches to study fibrosis in 3-D in vitro systems.

    abstract::Fibrotic diseases occur in virtually every tissue of the body and are a major cause of mortality, yet they remain largely untreatable and poorly understood on a mechanistic level. The development of anti-fibrotic agents has been hampered, in part, by the insufficient fibrosis biomimicry provided by traditional in vitr...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2016.02.006

    authors: Porras AM,Hutson HN,Berger AJ,Masters KS

    更新日期:2016-08-01 00:00:00

  • Protein secretion in bacteria.

    abstract::Most secretory proteins are synthesized as precursors with an amino-terminal signal peptide. Genetic identification of proteins essential for signal peptide dependent translocation to the Escherichia coli periplasm has led to the biochemical dissection of the secretion pathway. Additional mechanisms exist in Gram-nega...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0958-1669(91)90031-y

    authors: Gennity JM,Inouye M

    更新日期:1991-10-01 00:00:00

  • Biosynthesis of fatty acid-derived hydrocarbons: perspectives on enzymology and enzyme engineering.

    abstract::Enormous fuel consumption and growing environmental concerns have been spurring development of renewable biofuels. Among various biofuels, fatty acid-derived biohydrocarbons are ideal alternatives to non-renewable fossil fuels due to their closest properties to petroleum-based fuels. In the past decade, novel hydrocar...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2019.07.005

    authors: Liu K,Li S

    更新日期:2020-04-01 00:00:00

  • Microbial production and environmental applications of Pd nanoparticles for treatment of halogenated compounds.

    abstract::New biological inspired methods were recently developed to recover precious metals from waste streams and to concomitantly produce palladium nanoparticles on bacteria, that is, bio-Pd. This technology offers a variety of opportunities, as the process can considered to be green, tunable, affordable and scalable. The na...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.01.007

    authors: Hennebel T,De Corte S,Verstraete W,Boon N

    更新日期:2012-08-01 00:00:00

  • Towards synthetic microbial consortia for bioprocessing.

    abstract::The use of microbial consortia for bioprocessing has been limited by our ability to reliably control community composition and function simultaneously. Recent advances in synthetic biology have enabled population-level coordination and control of ecosystem stability and dynamics. Further, new experimental and computat...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.02.001

    authors: Shong J,Jimenez Diaz MR,Collins CH

    更新日期:2012-10-01 00:00:00

  • Fungi in lignocellulose breakdown and biopulping

    abstract::Biological pulping has the potential to improve the quality of pulp, properties of paper and to reduce energy costs and environmental impact relative to traditional pulping operations. It has been suggested that energy savings alone could make the process economically viable. Other benefits include improved burst stre...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章

    doi:10.1016/S0958-1669(99)80044-5

    authors: Breen A,Singleton FL

    更新日期:1999-06-01 00:00:00

  • Recent trends in nanopores for biotechnology.

    abstract::Nanopore technology employs a nanoscale hole in an insulating membrane to stochastically sense with high throughput individual biomolecules in solution. The generality of the nanopore detection principle and the ease of single-molecule detection suggest many potential applications of nanopores in biotechnology. Recent...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.11.008

    authors: Stoloff DH,Wanunu M

    更新日期:2013-08-01 00:00:00

  • Environmental monitoring using autonomous vehicles: a survey of recent searching techniques.

    abstract::Autonomous vehicles are becoming an essential tool in a wide range of environmental applications that include ambient data acquisition, remote sensing, and mapping of the spatial extent of pollutant spills. Among these applications, pollution source localization has drawn increasing interest due to its scientific and ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2017.01.009

    authors: Bayat B,Crasta N,Crespi A,Pascoal AM,Ijspeert A

    更新日期:2017-06-01 00:00:00

  • Gene expression using Xenopus oocytes.

    abstract::Xenopus oocytes have been used as a surrogate genetic system for the study of many facets of gene expression. Some recent salient examples where injected oocytes proved to be indispensable for the analysis of transcription, translation, RNA/protein transport, and ion channel formation are described. ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章

    doi:10.1016/0958-1669(91)90037-6

    authors: Richter JD

    更新日期:1991-10-01 00:00:00

  • Designer microbes for biosynthesis.

    abstract::Microbes have long been adapted for the biosynthetic production of useful compounds. There is increasing demand for the rapid and cheap microbial production of diverse molecules in an industrial setting. Microbes can now be designed and engineered for a particular biosynthetic purpose, thanks to recent developments in...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.02.014

    authors: Quin MB,Schmidt-Dannert C

    更新日期:2014-10-01 00:00:00

  • Human-on-chip for therapy development and fundamental science.

    abstract::Organ-on-chip systems integrate microfluidic technology and living cells to study human physiology and pathophysiology. These human in vitro models are promising substitutes for animal testing, and their small scale enables precise control of culture conditions and high-throughput experiments, which would not be econo...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.08.015

    authors: Luni C,Serena E,Elvassore N

    更新日期:2014-02-01 00:00:00

  • Fragment-based approaches to enzyme inhibition.

    abstract::Fragment-based approaches have provided a new paradigm for small-molecule drug discovery. The methodology is complementary to high-throughput screening approaches, starting from fragments of low molecular complexity and high ligand efficiency, and building up to more potent inhibitors. The approach, which depends heav...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2007.09.003

    authors: Ciulli A,Abell C

    更新日期:2007-12-01 00:00:00

  • Sugarcane improvement: how far can we go?

    abstract::In recent years, efforts to improve sugarcane have focused on the development of biotechnology for this crop. It has become clear that sugarcane lacks tools for the biotechnological route of improvement and that the initial efforts in sequencing ESTs had limited impact for breeding. Until recently, the models used by ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.09.002

    authors: Dal-Bianco M,Carneiro MS,Hotta CT,Chapola RG,Hoffmann HP,Garcia AA,Souza GM

    更新日期:2012-04-01 00:00:00

  • Biofilm formation and dispersal in Gram-positive bacteria.

    abstract::Biofilms are structured communities of bacteria, which are adhered to a surface and embedded in a self-produced matrix of extracellular polymeric substances. Since biofilms are very resistant to antimicrobial agents, they are at the basis of a range of problems, including quality and safety issues in food industry. Re...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2010.10.016

    authors: Abee T,Kovács AT,Kuipers OP,van der Veen S

    更新日期:2011-04-01 00:00:00

  • Engineered minichromosomes in plants.

    abstract::Genetic engineering for complex or combined traits requires the simultaneous expression of multiple genes, and has been considered as the bottleneck for the next generation of genetic engineering in plants. Minichromosome technology provides one solution to the stable expression and maintenance of multiple transgenes ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2007.09.005

    authors: Yu W,Han F,Birchler JA

    更新日期:2007-10-01 00:00:00

  • Predicting phenotypic variation from genotypes, phenotypes and a combination of the two.

    abstract::A central challenge for medicine is to predict disease risk and treatment outcomes for individuals. But what kind of information should be used to make useful predictions in biology? One important cause of phenotypic variation is of course genetics. However genetic predictions have both practical and fundamental limit...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.03.004

    authors: Burga A,Lehner B

    更新日期:2013-08-01 00:00:00

  • Sample treatment procedures for environmental sensing and biosensing.

    abstract::During the last years, a lot of efforts have been put into developing novel sensors and biosensors systems for monitoring the occurrence of emerging pollutants in the environment. These analyses are often challenging because of the variety of physico-chemical properties of these substances, the extremely diluted conce...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2017.02.017

    authors: Sanchís J,Llorca M,Barceló D,Farré M

    更新日期:2017-06-01 00:00:00

  • Nucleic acids in the environment.

    abstract::The past year has witnessed several excellent advances in basic and applied research on nucleic acids in the environment. Improved methods for extracting nucleic acids from environmental samples have been published, as well as information on the use of reporter genes in bacteria, natural genetic transformation in soil...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(96)80040-1

    authors: Trevors JT

    更新日期:1996-06-01 00:00:00

  • In vivo expression technology strategies: valuable tools for biotechnology.

    abstract::Whole genome sequences have shown that bacteria possess a significant number of genes that have no known function. It is probable that many of these are required for survival in environments other than the agar plate. In vivo selection strategies provide a means of obtaining genes active in complex natural environment...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(00)00132-4

    authors: Rainey PB,Preston GM

    更新日期:2000-10-01 00:00:00

  • Current initiatives for the validation of analytical methods for botanicals.

    abstract::The demand for validated analytical methods for botanicals has grown in response to the increasing consumer market for botanical supplements. Government initiatives to increase the availability of validated analytical methods and botanical reference material have led to the publication of numerous validation studies i...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.10.003

    authors: Brown PN,Lister P

    更新日期:2014-02-01 00:00:00

  • Phage display of proteins.

    abstract::Phage display of proteins continues to be an important technology with a variety of applications. In the past year, advances have been made in coupling rational protein design with the power of the display selection process. In addition to the widely used filamentous phage, other bacteriophage surface expression syste...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(96)80060-7

    authors: Dunn IS

    更新日期:1996-10-01 00:00:00

  • Systems biology of yeast: enabling technology for development of cell factories for production of advanced biofuels.

    abstract::Transportation fuels will gradually shift from oil based fuels towards alternative fuel resources like biofuels. Current bioethanol and biodiesel can, however, not cover the increasing demand for biofuels and there is therefore a need for advanced biofuels with superior fuel properties. Novel cell factories will provi...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.11.021

    authors: de Jong B,Siewers V,Nielsen J

    更新日期:2012-08-01 00:00:00

  • Fermentation technologies for the production of probiotics with high viability and functionality.

    abstract::There is growing scientific evidence supported by mechanistic and clinical studies that probiotics can provide health benefits. As probiotics are highly sensitive to many environmental factors, and because the propagation of many strains of intestinal origin is not straightforward, most commercial strains are selected...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2007.02.002

    authors: Lacroix C,Yildirim S

    更新日期:2007-04-01 00:00:00

  • Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.

    abstract::The recent technological advances in next generation sequencing have brought the field closer to the goal of reconstructing all genomes within a community by presenting high throughput sequencing at much lower costs. While these next-generation sequencing technologies have allowed a massive increase in available raw s...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.11.013

    authors: Scholz MB,Lo CC,Chain PS

    更新日期:2012-02-01 00:00:00

  • Carbohydrate nanotechnology: hierarchical assembly using nature's other information carrying biopolymers.

    abstract::Despite their central role in directing some of the most complex biological processes, carbohydrates--nature's other information carrying biopolymer--have been largely ignored as building blocks for synthetic hierarchical assemblies. The non-stoichiometric binding and astronomical diversity characteristic of carbohydr...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.11.016

    authors: Han X,Zheng Y,Munro CJ,Ji Y,Braunschweig AB

    更新日期:2015-08-01 00:00:00

  • The expanding role of marine microbes in pharmaceutical development.

    abstract::Marine microbes have received growing attention as sources of bioactive metabolites and offer a unique opportunity to both increase the number of marine natural products in clinical trials as well as expedite their development. This review focuses specifically on those molecules currently in the clinical pipeline that...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2010.09.013

    authors: Waters AL,Hill RT,Place AR,Hamann MT

    更新日期:2010-12-01 00:00:00

  • Molecular responses to drought, salinity and frost: common and different paths for plant protection.

    abstract::Drought, high salinity and low temperature are major environmental factors that limit plant productivity. Plants respond and adapt to these stresses in order to survive. Signaling pathways are induced in response to environmental stress and recent molecular and genetic studies have revealed that these pathways involve...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(03)00030-2

    authors: Seki M,Kamei A,Yamaguchi-Shinozaki K,Shinozaki K

    更新日期:2003-04-01 00:00:00