XbaI, PstI, and BglII restriction enzyme maps of the two orientations of the varicella-zoster virus genome.

Abstract:

:Cleavage of varicella-zoster virus DNA with the restriction endonucleases PstI, XbaI, and BglII resulted in 18, 22, and 20 fragments, respectively. Based on the molecular weights and molarities of these fragments, a molecular weight of 84 x 10(6) could be calculated for the varicella-zoster virus genome. In both the XbaI and the BglII patterns, four 0.5 M fragments were identified. The arrangement of the fragments was determined by molecular hybridization techniques, and the terminal fragments were identified by lambda exonuclease digestion. The 0.5 M fragments, of which two were located at the same terminus of the genome, contained repeated sequences: one terminally and one inverted internally. These results were in agreement with the existence of two equimolar subpopulations of the varicella-zoster virus genome, differing in the relative orientation of a short region of unique sequences. This region was bounded by the repeated sequences. From the molecular weights of the submolar fragments, a maximal molecular weight of 5 x 10(6) for the repeated region and a minimal molecular weight of 3.5 x 10(6) for the short unique sequence could be calculated.

journal_name

J Virol

journal_title

Journal of virology

authors

Dumas AM,Geelen JL,Weststrate MW,Wertheim P,van der Noordaa J

doi

10.1128/JVI.39.2.390-400.1981

subject

Has Abstract

pub_date

1981-08-01 00:00:00

pages

390-400

issue

2

eissn

0022-538X

issn

1098-5514

journal_volume

39

pub_type

杂志文章
  • Characterization of herpes simplex virus 2 temperature-sensitive mutants whose lesions map in or near the coding sequences for the major DNA-binding protein.

    abstract::By marker rescue with cloned herpes simplex virus 2 DNA fragments, we have mapped the temperature-sensitive mutations of a series of herpes simplex virus 2 mutants to a region of the herpes simplex virus 2 genome that lies within or near the coding sequences for the major DNA-binding protein, ICP8. In cells infected w...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.45.1.332-342.1983

    authors: Spang AE,Godowski PJ,Knipe DM

    更新日期:1983-01-01 00:00:00

  • Functional analysis of Vif protein shows less restriction of human immunodeficiency virus type 2 by APOBEC3G.

    abstract::Viral infectivity factor (Vif) is one of the human immunodeficiency virus (HIV) accessory proteins and is conserved in the primate lentivirus group. This protein is essential for viral replication in vivo and for productive infection of nonpermissive cells, such as peripheral blood mononuclear cells (PBMC). Vif counte...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.79.2.823-833.2005

    authors: Ribeiro AC,Maia e Silva A,Santa-Marta M,Pombo A,Moniz-Pereira J,Goncalves J,Barahona I

    更新日期:2005-01-01 00:00:00

  • Rapid viral decay in simian immunodeficiency virus-infected macaques receiving quadruple antiretroviral therapy.

    abstract::The viral dynamics in human immunodeficiency virus type 1 (HIV-1) infection have been studied extensively using mathematical modeling, but data from other primate lentivirus systems are scarce. This study was initiated to increase the understanding of the differences and similarities between the different primate lent...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00394-06

    authors: Brandin E,Thorstensson R,Bonhoeffer S,Albert J

    更新日期:2006-10-01 00:00:00

  • Identification of mar mutations in herpes simplex virus type 1 glycoprotein B which alter antigenic structure and function in virus penetration.

    abstract::Analysis of six monoclonal antibody-resistant (mar) mutants in herpes simplex virus type 1 glycoprotein B identified two type-common (II and III) and two type-specific (I and IV) antigenic sites on this molecule. To derive additional information on the location of these sites, mar mutations were mapped and nucleotide ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.63.2.730-738.1989

    authors: Highlander SL,Dorney DJ,Gage PJ,Holland TC,Cai W,Person S,Levine M,Glorioso JC

    更新日期:1989-02-01 00:00:00

  • Host cell regulation of induction of Epstein-Barr virus.

    abstract::When Epstein-Barr virus (EBV) negative cells (Raji) were treated with iododeoxyuridine, only the early antigen (EA) component was induced. There was no significant increase in EBV DNA and no virus particles were observed. Somatic-cell hybrids were prepared from the fusion of Raji and D98 cells (D98/Raji). When these c...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.14.1.174-176.1974

    authors: Glaser R,Nonoyama M

    更新日期:1974-07-01 00:00:00

  • Analysis of viral and cellular factors influencing herpesvirus-induced nuclear envelope breakdown.

    abstract::Herpesvirus nucleocapsids are translocated from their assembly site in the nucleus to the cytosol by acquisition of a primary envelope at the inner nuclear membrane which subsequently fuses with the outer nuclear membrane. This transport through the nuclear envelope requires homologs of the conserved herpesviral pUL31...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00068-12

    authors: Grimm KS,Klupp BG,Granzow H,Müller FM,Fuchs W,Mettenleiter TC

    更新日期:2012-06-01 00:00:00

  • Recombinant adeno-associated virus utilizes cell-specific infectious entry mechanisms.

    abstract:UNLABELLED:Understanding the entry and trafficking mechanism(s) of recombinant adeno-associated virus (rAAV) into host cells can lead to evolution in capsid and vector design and delivery methods, resulting in enhanced transduction and therapeutic gene expression. Variability of findings regarding the early entry pathw...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01971-14

    authors: Weinberg MS,Nicolson S,Bhatt AP,McLendon M,Li C,Samulski RJ

    更新日期:2014-11-01 00:00:00

  • 1-beta-D-arabinofuranosylcytosine inhibits borna disease virus replication and spread.

    abstract::Borna disease virus (BDV) is a nonsegmented, negative-strand RNA virus that causes neurological diseases in a variety of warm-blooded animal species. There is general consensus that BDV can also infect humans, being a possible zoonosis. Although the clinical consequences of human BDV infection are still controversial,...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.12.6268-6286.2002

    authors: Bajramovic JJ,Syan S,Brahic M,de la Torre JC,Gonzalez-Dunia D

    更新日期:2002-06-01 00:00:00

  • Naturally occurring TAP-dependent specific T-cell tolerance for a variant of an immunodominant retroviral cytotoxic T-lymphocyte epitope.

    abstract::Upon immunization and restimulation with tumors induced by the endogenous AKR/Gross murine leukemia virus (MuLV), C57BL/6 mice generate vigorous H-2K(b)-restricted cytotoxic T-lymphocyte (CTL) responses to a determinant (KSPWFTTL) derived from the p15E transmembrane portion of the viral envelope glycoprotein. By contr...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.74.8.3924-3928.2000

    authors: Kim V,Yewdell JW,Green WR

    更新日期:2000-04-01 00:00:00

  • Viral evolution and interferon resistance of hepatitis C virus RNA replication in a cell culture model.

    abstract::Hepatitis C virus (HCV) replicates through an error-prone process that may support the evolution of genetic variants resistant to the host cell antiviral response and interferon (IFN)-based therapy. We evaluated HCV-IFN interactions within a long-term culture system of Huh7 cell lines harboring different variants of a...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.78.21.11591-11604.2004

    authors: Sumpter R Jr,Wang C,Foy E,Loo YM,Gale M Jr

    更新日期:2004-11-01 00:00:00

  • Identification and initial characterization of the murine gammaherpesvirus 68 gene M3, encoding an abundantly secreted protein.

    abstract::Several viruses, including members of the gammaherpesvirus family, encode proteins that are secreted into the extracellular environment. We have identified an abundant 44-kDa secreted protein that is present in the supernatant of fibroblasts infected with murine gammaherpesvirus 68 (gammaHV68; also referred to as MHV-...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.73.5.4524-4529.1999

    authors: van Berkel V,Preiter K,Virgin HW 4th,Speck SH

    更新日期:1999-05-01 00:00:00

  • Active-site mutations in the South african human immunodeficiency virus type 1 subtype C protease have a significant impact on clinical inhibitor binding: kinetic and thermodynamic study.

    abstract::Human immunodeficiency virus (HIV) infections in sub-Saharan Africa represent about 56% of global infections. Study of active-site mutations (the V82A single mutation and the V82F I84V double mutation) in the less-studied South African HIV type 1 subtype C (C-SA) protease indicated that neither mutation had a signific...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00726-08

    authors: Mosebi S,Morris L,Dirr HW,Sayed Y

    更新日期:2008-11-01 00:00:00

  • An overlapping bacterial artificial chromosome system that generates vectorless progeny for channel catfish herpesvirus.

    abstract::Herpesviruses are important pathogens of humans and other animals. Herpesvirus infectious clones that can reconstitute phenotypically wild-type (wt) virus are extremely valuable tools for elucidating the roles of specific genes in virus pathophysiology as well as for making vaccines. Ictalurid herpesvirus 1 (channel c...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02152-07

    authors: Kunec D,Hanson LA,van Haren S,Nieuwenhuizen IF,Burgess SC

    更新日期:2008-04-01 00:00:00

  • Prevention of disease induced by a partially heterologous AIDS virus in rhesus monkeys by using an adjuvanted multicomponent protein vaccine.

    abstract::Recombinant protein subunit AIDS vaccines have been based predominantly on the virus envelope protein. Such vaccines elicit neutralizing antibody responses that can provide type-specific sterilizing immunity, but in most cases do not confer protection against divergent viruses. In this report we demonstrate that a mul...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.2.1049-1058.2003

    authors: Voss G,Manson K,Montefiori D,Watkins DI,Heeney J,Wyand M,Cohen J,Bruck C

    更新日期:2003-01-01 00:00:00

  • Restricted V-segment usage in T-cell receptors from cytotoxic T lymphocytes specific for a major epitope of lymphocytic choriomeningitis virus.

    abstract::Cytotoxic T lymphocytes (CTL) play an important role in recovery from a number of viral infections. They are also implicated in virus-induced immunopathology as best demonstrated in lymphocytic choriomeningitis virus (LCMV) infection of adult immunocompetent mice. In the present study, the structure of the T-cell rece...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.12.5919-5926.1990

    authors: Yanagi Y,Maekawa R,Cook T,Kanagawa O,Oldstone MB

    更新日期:1990-12-01 00:00:00

  • Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells.

    abstract::The alternating host cycle and persistent vector infection may constrain the evolution of arboviruses. To test this hypothesis, eastern equine encephalitis virus was passaged in BHK or mosquito cells, as well as in alternating (both) host cell passages. High and low multiplicities were used to examine the effect of de...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.73.5.4316-4326.1999

    authors: Weaver SC,Brault AC,Kang W,Holland JJ

    更新日期:1999-05-01 00:00:00

  • Sequence-specific binding of the influenza virus RNA polymerase to sequences located at the 5' ends of the viral RNAs.

    abstract::The enzymatic activity of recombinant influenza virus RNA polymerase is strictly dependent on the addition of a template RNA containing 5' and 3' viral sequences. Here we report the analysis of the binding specificity and physical characterization of the complex by using gel shift, modification interference, and densi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.68.8.5108-5116.1994

    authors: Tiley LS,Hagen M,Matthews JT,Krystal M

    更新日期:1994-08-01 00:00:00

  • The adenovirus E3 14.5-kilodalton protein, which is required for down-regulation of the epidermal growth factor receptor and prevention of tumor necrosis factor cytolysis, is an integral membrane protein oriented with its C terminus in the cytoplasm.

    abstract::We previously reported that the adenovirus type 5 E3 14.5-kilodalton protein (14.5K) forms a complex with E3 10.4K and that both proteins are required to down-regulate the epidermal growth factor receptor in adenovirus-infected human cells. Both proteins are also required to prevent cytolysis by tumor necrosis factor ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.66.3.1665-1673.1992

    authors: Krajcsi P,Tollefson AE,Anderson CW,Wold WS

    更新日期:1992-03-01 00:00:00

  • Intercompartmental recombination of HIV-1 contributes to env intrahost diversity and modulates viral tropism and sensitivity to entry inhibitors.

    abstract::HIV-1 circulates within an infected host as a genetically heterogeneous viral population. Viral intrahost diversity is shaped by substitutional evolution and recombination. Although many studies have speculated that recombination could have a significant impact on viral phenotype, this has never been definitively demo...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00131-11

    authors: Brown RJ,Peters PJ,Caron C,Gonzalez-Perez MP,Stones L,Ankghuambom C,Pondei K,McClure CP,Alemnji G,Taylor S,Sharp PM,Clapham PR,Ball JK

    更新日期:2011-06-01 00:00:00

  • Transcription originating in the long terminal repeats of the endogenous mouse mammary tumor virus MTV-3 is activated in Stat5a-null mice and picks Up hitchhiking exons.

    abstract::The enhancer within the long terminal repeats (LTRs) of acquired somatic mouse mammary tumor viruses (MMTV) can activate juxtaposed genes and induce mammary tumors. In contrast, germ line proviral MMTV genomes are integrated in the host genome and considered to be genetically confined transcription units. Here we demo...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.73.10.8669-8676.1999

    authors: Stegalkina SS,Guerrero A,Walton KD,Liu X,Robinson GW,Hennighausen L

    更新日期:1999-10-01 00:00:00

  • Vaccinia virus DNA ligase recruits cellular topoisomerase II to sites of viral replication and assembly.

    abstract::Vaccinia virus replication is inhibited by etoposide and mitoxantrone even though poxviruses do not encode the type II topoisomerases that are the specific targets of these drugs. Furthermore, one can isolate drug-resistant virus carrying mutations in the viral DNA ligase and yet the ligase is not known to exhibit sen...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02723-07

    authors: Lin YC,Li J,Irwin CR,Jenkins H,DeLange L,Evans DH

    更新日期:2008-06-01 00:00:00

  • Early infection of the central nervous system by the GDVII and DA strains of Theiler's virus.

    abstract::The DA strain of Theiler's virus, a murine picornavirus, causes a persistent infection of glial cells of the white matter of the spinal cord, associated with chronic inflammation and primary demyelination. The GDVII strain causes an acute fatal grey matter encephalomyelitis. We characterized the target cells of GDVII ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.69.5.3197-3200.1995

    authors: Aubert C,Brahic M

    更新日期:1995-05-01 00:00:00

  • Inhibition of the type I interferon response by the nucleoprotein of the prototypic arenavirus lymphocytic choriomeningitis virus.

    abstract::The prototypic arenavirus lymphocytic choriomeningitis virus (LCMV) is a formidable battle horse for the study of viral immunology, as well as viral persistence and associated diseases. Investigations with LCMV have uncovered basic mechanisms by which viruses avoid elimination by the host adaptive immune response. In ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00555-06

    authors: Martínez-Sobrido L,Zúñiga EI,Rosario D,García-Sastre A,de la Torre JC

    更新日期:2006-09-01 00:00:00

  • Evidence for persistent, occult infection in neonatal macaques following perinatal transmission of simian-human immunodeficiency virus SF162P3.

    abstract::To model human immunodeficiency virus (HIV) perinatal transmission, we studied infection of simian-human immunodeficiency virus (SHIV) SF162P3 in 10 pregnant Macaca nemestrina females and their offspring. Four of nine infants born to and suckled by these dams had evidence of infection, a transmission rate of 44.4% (95...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01759-06

    authors: Jayaraman P,Zhu T,Misher L,Mohan D,Kuller L,Polacino P,Richardson BA,Bielefeldt-Ohmann H,Anderson D,Hu SL,Haigwood NL

    更新日期:2007-01-01 00:00:00

  • Targeting human immunodeficiency virus type 1 reverse transcriptase by intracellular expression of single-chain variable fragments to inhibit early stages of the viral life cycle.

    abstract::Novel molecular approaches to inhibit human immunodeficiency virus type 1 (HIV-1) infection have received increasing attention because of the lack of effective antiviral drug therapies in vivo. We now demonstrate that cells can be intracellularly immunized by cytoplasmic expression of single-chain variable antibody fr...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.70.6.3392-3400.1996

    authors: Shaheen F,Duan L,Zhu M,Bagasra O,Pomerantz RJ

    更新日期:1996-06-01 00:00:00

  • Cooperative transformation and coexpression of bovine papillomavirus type 1 E5 and E7 proteins.

    abstract::Productively infected bovine fibropapillomas were examined for bovine papillomavirus type 1 (BPV-1) E7 localization. BPV-1 E7 was observed in the cytoplasm of basal and lower spinous epithelial cells, coexpressed in the cytoplasm of basal cells with the E5 oncoprotein. E7 was also observed in nucleoli throughout the b...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.1.513-521.2001

    authors: Bohl J,Hull B,Vande Pol SB

    更新日期:2001-01-01 00:00:00

  • Atypical RNA Elements Modulate Translational Readthrough in Tobacco Necrosis Virus D.

    abstract::Tobacco necrosis virus, strain D (TNV-D), is a positive-strand RNA virus in the genus Betanecrovirus and family Tombusviridae The production of its RNA-dependent RNA polymerase, p82, is achieved by translational readthrough. This process is stimulated by an RNA structure that is positioned immediately downstream of th...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02443-16

    authors: Newburn LR,White KA

    更新日期:2017-03-29 00:00:00

  • A preferred region for integration of Friend murine leukemia virus in hematopoietic neoplasms is closely linked to the Int-2 oncogene.

    abstract::Gene mapping experiments show that Fis-1, a preferred integration region for Friend murine leukemia virus in hematopoietic neoplasms, is extremely closely linked to Int-2, a preferred integration region for mouse mammary tumor virus in mammary carcinomas. Studies at the RNA and DNA level prove that these loci are dist...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.60.3.1156-1158.1986

    authors: Silver J,Buckler CE

    更新日期:1986-12-01 00:00:00

  • Electron microscopy of simian virus 40 DNA configuration under denaturation conditions.

    abstract::After isolation, the DNA of simian virus 40 appeared as a negative supertwist (form I) or as an open circle with at least one single-strand scission (form II). Under the denaturation conditions usually applied, such as heating in the presence of formaldehyde or application of alkali, form I molecules could appear as "...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.15.3.585-598.1975

    authors: Mayer F,Mazaitis AJ,Pühler A

    更新日期:1975-03-01 00:00:00

  • A Redundant Mechanism of Recruitment Underlies the Remarkable Plasticity of the Requirement of Poliovirus Replication for the Cellular ArfGEF GBF1.

    abstract::The replication of many positive-strand RNA viruses [(+)RNA viruses] depends on the cellular protein GBF1, but its role in the replication process is not clear. In uninfected cells, GBF1 activates small GTPases of the Arf family and coordinates multiple steps of membrane metabolism, including functioning of the cellul...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00856-19

    authors: Viktorova EG,Gabaglio S,Meissner JM,Lee E,Moghimi S,Sztul E,Belov GA

    更新日期:2019-10-15 00:00:00