Medusa: a scalable MR console using USB.

Abstract:

:Magnetic resonance imaging (MRI) pulse sequence consoles typically employ closed proprietary hardware, software, and interfaces, making difficult any adaptation for innovative experimental technology. Yet MRI systems research is trending to higher channel count receivers, transmitters, gradient/shims, and unique interfaces for interventional applications. Customized console designs are now feasible for researchers with modern electronic components, but high data rates, synchronization, scalability, and cost present important challenges. Implementing large multichannel MR systems with efficiency and flexibility requires a scalable modular architecture. With Medusa, we propose an open system architecture using the universal serial bus (USB) for scalability, combined with distributed processing and buffering to address the high data rates and strict synchronization required by multichannel MRI. Medusa uses a modular design concept based on digital synthesizer, receiver, and gradient blocks, in conjunction with fast programmable logic for sampling and synchronization. Medusa is a form of synthetic instrument, being reconfigurable for a variety of medical/scientific instrumentation needs. The Medusa distributed architecture, scalability, and data bandwidth limits are presented, and its flexibility is demonstrated in a variety of novel MRI applications.

journal_name

IEEE Trans Med Imaging

authors

Stang PP,Conolly SM,Santos JM,Pauly JM,Scott GC

doi

10.1109/TMI.2011.2169681

subject

Has Abstract

pub_date

2012-02-01 00:00:00

pages

370-9

issue

2

eissn

0278-0062

issn

1558-254X

journal_volume

31

pub_type

杂志文章
  • Magnetic Particle Imaging: A Resovist Based Marking Technology for Guide Wires and Catheters for Vascular Interventions.

    abstract::Magnetic particle imaging (MPI) is able to provide high temporal and good spatial resolution, high signal to noise ratio and sensitivity. Furthermore, it is a truly quantitative method as its signal strength is proportional to the concentration of its tracer, superparamagnetic iron oxide nanoparticles (SPIOs), over a ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2559538

    authors: Haegele J,Panagiotopoulos N,Cremers S,Rahmer J,Franke J,Duschka RL,Vaalma S,Heidenreich M,Borgert J,Borm P,Barkhausen J,Vogt FM

    更新日期:2016-10-01 00:00:00

  • The elliptical cone of uncertainty and its normalized measures in diffusion tensor imaging.

    abstract::Diffusion tensor magnetic resonance imaging (DT-MRI) is capable of providing quantitative insights into tissue microstructure in the brain. An important piece of information offered by DT-MRI is the directional preference of diffusing water molecules within a voxel. Building upon this local directional information, DT...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2008.915663

    authors: Koay CG,Nevo U,Chang LC,Pierpaoli C,Basser PJ

    更新日期:2008-06-01 00:00:00

  • Multimodal registration and data fusion for cardiac resynchronization therapy optimization.

    abstract::Cardiac resynchronization therapy (CRT) has been shown to improve cardiovascular function in specific patients suffering from heart failure. This procedure still needs to be optimized to overcome the high rate of implanted patients that do not respond to this therapy. We propose in this work a better characterization ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2014.2311694

    authors: Tavard F,Simon A,Leclercq C,Donal E,Hernández AI,Garreau M

    更新日期:2014-06-01 00:00:00

  • Separation of Metabolites and Macromolecules for Short-TE 1H-MRSI Using Learned Component-Specific Representations.

    abstract::Short-echo-time (TE) proton magnetic resonance spectroscopic imaging (MRSI) allows for simultaneously mapping a number of molecules in the brain, and has been recognized as an important tool for studying in vivo biochemistry in various neuroscience and disease applications. However, separation of the metabolite and ma...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2020.3048933

    authors: Li Y,Wang Z,Sun R,Lam F

    更新日期:2021-01-04 00:00:00

  • Novel scatter compensation of list-mode PET data using spatial and energy dependent corrections.

    abstract::With the widespread use of positron emission tomography (PET) crystals with greatly improved energy resolution (e.g., 11.5% with LYSO as compared to 20% with BGO) and of list-mode acquisitions, the use of the energy of individual events in scatter correction schemes becomes feasible. We propose a novel scatter approac...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2010.2095025

    authors: Guérin B,El Fakhri G

    更新日期:2011-03-01 00:00:00

  • Three-dimensional PET emission scan registration and transmission scan synthesis.

    abstract::The duration of a positron emission tomography (PET) imaging scan can be reduced if the transmission scan of one patient which is used for emission correction can be synthesized by using the reference transmission scan of another patient. In this paper, we propose a new intersubjects PET emission scan registration met...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.640744

    authors: Huang CL,Chang WT,Wu LC,Wang JK

    更新日期:1997-10-01 00:00:00

  • Automatic Segmentation of Wrist Bones in CT Using a Statistical Wrist Shape + Pose Model.

    abstract::Segmentation of the wrist bones in CT images has been frequently used in different clinical applications including arthritis evaluation, bone age assessment and image-guided interventions. The major challenges include non-uniformity and spongy textures of the bone tissue as well as narrow inter-bone spaces. In this wo...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2529500

    authors: Anas EM,Rasoulian A,Seitel A,Darras K,Wilson D,John PS,Pichora D,Mousavi P,Rohling R,Abolmaesumi P

    更新日期:2016-08-01 00:00:00

  • Lesion detection in dynamic FDG-PET using matched subspace detection.

    abstract::We describe a matched subspace detection algorithm to assist in the detection of small tumors in dynamic positron emission tomography (PET) images. The algorithm is designed to differentiate tumors from background using the time activity curves (TACs) that characterize the uptake of PET tracers. TACs are modeled using...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2008.929105

    authors: Li Z,Li Q,Yu X,Conti PS,Leahy RM

    更新日期:2009-02-01 00:00:00

  • Ultrafast Doppler imaging of blood flow dynamics in the myocardium.

    abstract::Imaging intramyocardial vascular flows in real-time could strongly help to achieve better diagnostic of cardiovascular diseases. To date, no standard imaging modality allows describing accurately myocardial blood flow dynamics with good spatial and temporal resolution. We recently introduced a novel ultrasonic Doppler...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2012.2203316

    authors: Osmanski BF,Pernot M,Montaldo G,Bel A,Messas E,Tanter M

    更新日期:2012-08-01 00:00:00

  • Analysis of the role of lead resistivity in specific absorption rate for deep brain stimulator leads at 3T MRI.

    abstract::Magnetic resonance imaging (MRI) on patients with implanted deep brain stimulators (DBSs) can be hazardous because of the antenna-effect of leads exposed to the incident radio-frequency field. This study evaluated electromagnetic field and specific absorption rate (SAR) changes as a function of lead resistivity on an ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2010.2040624

    authors: Angelone LM,Ahveninen J,Belliveau JW,Bonmassar G

    更新日期:2010-04-01 00:00:00

  • Microwave image reconstruction utilizing log-magnitude and unwrapped phase to improve high-contrast object recovery.

    abstract::Reconstructing images of large high-contrast objects with microwave methods has proved difficult. Successful images have generally been obtained by using a priori information to constrain the image reconstruction to recover the correct electromagnetic property distribution. In these situations, the measured electric f...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.913177

    authors: Meaney PM,Paulsen KD,Pogue BW,Miga MI

    更新日期:2001-02-01 00:00:00

  • Improved Contrast-Enhanced Power Doppler Using a Coherence-Based Estimator.

    abstract::While plane-wave imaging can improve the performance of power Doppler by enabling much longer ensembles than systems using focused beams, the long-ensemble averaging of the zero-lag autocorrelation R(0) estimates does not directly decrease the mean noise level, but only decreases its variance. Spatial variation of the...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2017.2699672

    authors: Tremblay-Darveau C,Bar-Zion A,Williams R,Sheeran PS,Milot L,Loupas T,Adam D,Bruce M,Burns PN

    更新日期:2017-09-01 00:00:00

  • A wavelet-based multiresolution regularized least squares reconstruction approach for optical tomography.

    abstract::In this paper, we present a wavelet-based multigrid approach to solve the perturbation equation encountered in optical tomography. With this scheme, the unknown image, the data, as well as the weight matrix are all represented by wavelet expansions, thus yielding a multiresolution representation of the original pertur...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.563666

    authors: Zhu W,Wang Y,Deng Y,Yao Y,Barbour RL

    更新日期:1997-04-01 00:00:00

  • Efficient Lattice Boltzmann Solver for Patient-Specific Radiofrequency Ablation of Hepatic Tumors.

    abstract::Radiofrequency ablation (RFA) is an established treatment for liver cancer when resection is not possible. Yet, its optimal delivery is challenged by the presence of large blood vessels and the time-varying thermal conductivity of biological tissue. Incomplete treatment and an increased risk of recurrence are therefor...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2406575

    authors: Audigier C,Mansi T,Delingette H,Rapaka S,Mihalef V,Carnegie D,Boctor E,Choti M,Kamen A,Ayache N,Comaniciu D

    更新日期:2015-07-01 00:00:00

  • Scale-based diffusive image filtering preserving boundary sharpness and fine structures.

    abstract::Image acquisition techniques often suffer from low signal-to-noise ratio (SNR) and/or contrast-to-noise ratio (CNR). Although many acquisition techniques are available to minimize these, post acquisition filtering is a major off-line image processing technique commonly used to improve the SNR and CNR. A major drawback...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.963817

    authors: Saha PK,Udupa JK

    更新日期:2001-11-01 00:00:00

  • Vessel surface reconstruction with a tubular deformable model.

    abstract::Three-dimensional (3-D) angiographic methods are gaining acceptance for evaluation of atherosclerotic disease. However, measurement of vessel stenosis from 3-D angiographic methods can be problematic due to limited image resolution and contrast. We present a method for reconstructing vessel surfaces from 3-D angiograp...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.974935

    authors: Yim PJ,Cebral JJ,Mullick R,Marcos HB,Choyke PL

    更新日期:2001-12-01 00:00:00

  • Digital mammography: mixed feature neural network with spectral entropy decision for detection of microcalcifications.

    abstract::A computationally efficient mixed feature based neural network (MFNN) is proposed for the detection of microcalcification clusters (MCCs) in digitized mammograms. The MFNN employs features computed in both the spatial and spectral domain and uses spectral entropy as a decision parameter. Backpropagation with Kalman fi...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.538936

    authors: Zheng B,Qian W,Clarke LP

    更新日期:1996-01-01 00:00:00

  • Narrowband magnetic particle imaging.

    abstract::The magnetic particle imaging (MPI) method directly images the magnetization of super-paramagnetic iron oxide (SPIO) nanoparticles, which are contrast agents commonly used in magnetic resonance imaging (MRI). MPI, as originally envisioned, requires a high-bandwidth receiver coil and preamplifier, which are difficult t...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2009.2013849

    authors: Goodwill PW,Scott GC,Stang PP,Conolly SM

    更新日期:2009-08-01 00:00:00

  • Accelerating the nonequispaced fast Fourier transform on commodity graphics hardware.

    abstract::We present a fast parallel algorithm to compute the nonequispaced fast Fourier transform on commodity graphics hardware (the GPU). We focus particularly on a novel implementation of the convolution step in the transform as it was previously its most time consuming part. We describe the performance for two common sampl...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2007.909834

    authors: Sorensen TS,Schaeffter T,Noe KO,Hansen MS

    更新日期:2008-04-01 00:00:00

  • Feedback control of the nuclear magnetization state: modeling and control design.

    abstract::Magnetic resonance (MR) images are obtained by observing the fluctuations in nuclear magnetization produced by sequences of RF pulses and applied magnetic field gradients. The design of a pulse sequence is based on the expected response of the nuclear magnetization. Currently, all pulse sequence parameters are loaded ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.79471

    authors: Schiano JL,Magin RL,Wright SM

    更新日期:1991-01-01 00:00:00

  • Selection of a convolution function for Fourier inversion using gridding [computerised tomography application].

    abstract::In the technique known as gridding, the data samples are weighted for sampling density and convolved with a finite kernel, then resampled on a grid preparatory to a fast Fourier transform. The authors compare the artifact introduced into the image for various convolving functions of different sizes, including the Kais...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.97598

    authors: Jackson JI,Meyer CH,Nishimura DG,Macovski A

    更新日期:1991-01-01 00:00:00

  • A task-specific evaluation of three-dimensional image interpolation techniques.

    abstract::Image interpolation is an important operation that is widely used in medical imaging, image processing, and computer graphics. A variety of interpolation methods are available in the literature. However, their systematic evaluation is lacking. In a previous paper, we presented a framework for the task-independent comp...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.759116

    authors: Grevera GJ,Udupa JK,Miki Y

    更新日期:1999-02-01 00:00:00

  • Differentiation and characterization of rat mammary fibroadenomas and 4T1 mouse carcinomas using quantitative ultrasound imaging.

    abstract::Scatterer properties like the average effective scatterer diameter and acoustic concentration were determined in vivo using a quantitative ultrasound (QUS) technique from two tumor phenotypes grown in animal models. These tumor models included spontaneously occurring mammary fibroadenomas in rats and transplanted 4T1 ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2004.826953

    authors: Oelze ML,O'Brien WD Jr,Blue JP,Zachary JF

    更新日期:2004-06-01 00:00:00

  • Seamless Lesion Insertion for Data Augmentation in CAD Training.

    abstract::The performance of a classifier is largely dependent on the size and representativeness of data used for its training. In circumstances where accumulation and/or labeling of training samples is difficult or expensive, such as medical applications, data augmentation can potentially be used to alleviate the limitations ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2640180

    authors: Pezeshk A,Petrick N,Weijie Chen,Sahiner B

    更新日期:2017-04-01 00:00:00

  • Soft tissue differentiation using multiband signatures of high resolution ultrasonic transmission tomography.

    abstract::In this paper, we are interested in soft tissue differentiation by multiband images obtained from the High-Resolution Ultrasonic Transmission Tomography (HUTT) system using a spectral target detection method based on constrained energy minimization (CEM). We have developed a new tissue differentiation method (called "...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2004.843179

    authors: Jeong JW,Kim TS,Shin DC,Do S,Singh M,Marmarelis VZ

    更新日期:2005-03-01 00:00:00

  • Spatial-resolution enhancement in computed tomography.

    abstract::We propose an approach that combines an asymmetric fan-beam configuration and a new reconstruction algorithm to enhancing spatial resolution in computed tomography (CT). The asymmetric configuration can be achieved by changing the center of rotation (COR) from the conventional symmetric configuration. It does not, how...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2004.840846

    authors: Pan X,Yu L,Kao CM

    更新日期:2005-02-01 00:00:00

  • Improvement of Chest Region CT Images through Automated Gray-Level Remapping.

    abstract::A software system, CTIP, written in Fortran is discussed which remaps the computerized tomography (CT) image gray level so that both the lung and heart regions are clearly visible with a "natural anatomical appearance." The system is adaptive to image statistics derived from the gray-level histogram of the entire imag...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.1986.4307736

    authors: Davis G,Wallenslager ST

    更新日期:1986-01-01 00:00:00

  • Splat feature classification with application to retinal hemorrhage detection in fundus images.

    abstract::A novel splat feature classification method is presented with application to retinal hemorrhage detection in fundus images. Reliable detection of retinal hemorrhages is important in the development of automated screening systems which can be translated into practice. Under our supervised approach, retinal color images...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2012.2227119

    authors: Tang L,Niemeijer M,Reinhardt JM,Garvin MK,Abràmoff MD

    更新日期:2013-02-01 00:00:00

  • A method for modeling noise in medical images.

    abstract::We have developed a method to study the statistical properties of the noise found in various medical images. The method is specifically designed for types of noise with uncorrelated fluctuations. Such signal fluctuations generally originate in the physical processes of imaging rather than in the tissue textures. Vario...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2004.832656

    authors: Gravel P,Beaudoin G,De Guise JA

    更新日期:2004-10-01 00:00:00

  • Automatic Stem Cell Detection in Microscopic Whole Mouse Cryo-Imaging.

    abstract::With its single cell sensitivity over volumes as large as or larger than a mouse, cryo-imaging enables imaging of stem cell biodistribution, homing, engraftment, and molecular mechanisms. We developed and evaluated a highly automated software tool to detect fluorescently labeled stem cells within very large ( ∼ 200 GB...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2497285

    authors: Wuttisarnwattana P,Gargesha M,van't Hof W,Cooke KR,Wilson DL

    更新日期:2016-03-01 00:00:00