The genome of Beet cryptic virus 1 shows high homology to certain cryptoviruses present in phylogenetically distant hosts.

Abstract:

UNLABELLED:This study determined the complete nucleotide sequence of Beet cryptic virus 1 (BCV1). As expected by analogy to previously sequenced alphacryptoviruses, dsRNA1 (2008 bp) encodes a 72.5-kDa protein containing sequence motifs characteristic for RNA-dependent RNA polymerases (RdRp). In addition to the full-length dsRNA1, a truncated form was also detected in dsRNA extracts. dsRNA2 (1783 bp) codes for the viral coat protein (CP) as proven by the identity of the predicted CP sequence to peptide sequences of the purified virion protein. The amino acid sequence of BCV1 RdRp as well as the 5'- and 3'-UTRs show 81-85% identity to the corresponding regions of Vicia cryptic virus (VCV), White clover cryptic virus 1 (WCCV1) and Carrot cryptic virus (CaCV). The amino acid sequence identity of the CP is about 55-62%, moreover, a strong conservation of predicted alpha-helical regions was observed. The high degree of similarity of these seed- and pollen-transmitted viruses persisting in phylogenetically distant hosts, together with their high similarity to fungal partitiviruses strongly supports the hypothesis that horizontal transfer by a fungus played a role in the emergence of the present cryptovirus species. The change in the distribution of cryptic viruses may also be due to human influence: While earlier BCV1 occurred frequently in sugar beet cultivars, it is very rare in cultivars currently used in agricultural practice and was detected in only one of the 28 cultivars investigated in our experiments. ELECTRONIC SUPPLEMENTARY MATERIAL:The online version of this article (doi:10.1007/s11262-009-0432-4) contains supplementary material, which is available to authorized users.

journal_name

Virus Genes

journal_title

Virus genes

authors

Szego A,Enünlü N,Deshmukh SD,Veliceasa D,Hunyadi-Gulyás E,Kühne T,Ilyés P,Potyondi L,Medzihradszky K,Lukács N

doi

10.1007/s11262-009-0432-4

subject

Has Abstract

pub_date

2010-04-01 00:00:00

pages

267-76

issue

2

eissn

0920-8569

issn

1572-994X

journal_volume

40

pub_type

杂志文章
  • Influenza A viruses: why focusing on M2e-based universal vaccines.

    abstract::The threat of highly virulent avian influenza, such as H5N1 and swine-origin H1N1 influenza viruses, bring out an urgent need to develop a universal influenza vaccine, which may provide cross-protection against different strain of influenza A viruses. The extra-domain of influenza M2 protein (M2e), which is almost com...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1007/s11262-010-0547-7

    authors: Ebrahimi SM,Tebianian M

    更新日期:2011-02-01 00:00:00

  • Genotypic and phenotypic characterization of the California 99 (Cal99) variant of infectious bronchitis virus.

    abstract::The California 99 (Cal99) variant of infectious bronchitis virus (IBV) was first recovered in 1999 from vaccinated broiler chicken flocks in Central California. The S1 hypervariable region of Cal99 genome was most closely related to Arkansas (Ark) serotype viruses. In this study, the complete genome of Cal99 was seque...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-006-0014-7

    authors: Mondal SP,Cardona CJ

    更新日期:2007-06-01 00:00:00

  • Antigenic variation in Foot and Mouth Disease Virus type Asia 1 isolates circulated during 1993-95 in India.

    abstract::The antigenic variation in Foot and Mouth Disease Virus (FMDV) is very high. The effective strategy to control the Foot and Mouth Disease (FMD) in India which is a habitat of four serotypes O, A, C and Asia 1, is by regular vaccination, using the vaccine strain most suitable for the local situation. India is an endemi...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1007984621839

    authors: Tulasiram P,Tyagi M,Srinivas K,Prabhudas K,Natarajan C,Suryanarayana V

    更新日期:1997-01-01 00:00:00

  • Identification of a new Bombyx mori nucleopolyhedrovirus and analysis of its bro gene family.

    abstract::The highly pathogenic Bombyx mori nucleopolyhedrovirus (BmNPV) has caused severe damages to sericulture in many countries, and the relationship between the pathogenicity of various BmNPV strains and their geographical evolution has been the topic of our interest. In this study, we isolated a new BmNPV strain from Thai...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-012-0721-1

    authors: Zhou JB,Li XQ,De-Eknamkul W,Suraporn S,Xu JP

    更新日期:2012-06-01 00:00:00

  • Sequence characteristics of natural populations of tomato spotted wilt tospovirus infecting flue-cured tobacco in Georgia.

    abstract::Using primers from conserved regions, the nucleocapsid (Nc) gene sequences of naturally occurring tomato spotted wilt tospovirus (TSWV) isolates from flue-cured tobacco (Nicotiana tabacum) grown in several Georgia counties were amplified by immunocapture-reverse transcription-polymerase chain reaction. The resulting a...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008072825152

    authors: Pappu H,Pappu S,Jain R,Bertrand P,Culbreath A,McPherson R,Csinos A

    更新日期:1998-01-01 00:00:00

  • Nucleotide sequence of the capsid protein gene of potato virus Y (PVY).

    abstract::The nucleotide sequence of the 3' terminal region of potato virus Y (PVY) was determined. Starting with a poly(A) tail of 18 residues a non-coding region of 335 nucleotides precedes the region encoding for the virus coat protein (cp) 801 nucleotides long ending with a TGA. This region was located by comparing the pred...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00572704

    authors: Rosner A,Raccah B

    更新日期:1988-06-01 00:00:00

  • Short communication: isolation and phylogenetic analysis of an avian-origin H3N2 canine influenza virus in dog shelter, China.

    abstract::A H3N2 canine influenza virus, A/canine/Guangdong/3/2011 (H3N2), was isolated from roaming dogs in rural China. Sequence and phylogenetic analysis of eight gene segments revealed that the A/canine/Guangdong/3/2011 (H3N2) was most similar to a recent H3N2 canine influenza virus isolated in cats from South Korea, which ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-013-0882-6

    authors: Su S,Yuan Z,Chen J,Xie J,Li H,Huang Z,Zhang M,Du G,Chen Z,Tu L,Zou Y,Miao J,Wang H,Jia K,Li S

    更新日期:2013-06-01 00:00:00

  • Identification and characterization of odv-e25 of Spodoptera litura multicapsid nucleopolyhedrovirus.

    abstract::Spodoptera litura multicapsid nucleopolyhedrovirus (SpltMNPV) odv-e25 is 684 bp long, potentially encoding 227 amino acids with a predicted molecular weight of 24.9 kDa. Homology analysis indicated that SpltMNPV ODV-E25 has 35-65% amino acid identity with that of other known baculoviruses. RT-PCR results revealed that...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-005-5840-5

    authors: Li Z,Pan L,Yu H,Li S,Zhang G,Pang Y

    更新日期:2006-02-01 00:00:00

  • Meningoencephalitis in mice infected with an equine herpesvirus 1 strain KyA recombinant expressing glycoprotein I and glycoprotein E.

    abstract::One of the consequences of equine herpesvirus 1 (EHV-1) infection in the natural host is a neurological disease that can lead to paralysis. The pathology associated with EHV-1-induced neurological disease includes vasculitis of the small blood vessels within the central nervous system and subsequent damage to the surr...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/B:VIRU.0000032785.19420.14

    authors: Frampton AR Jr,Smith PM,Zhang Y,Grafton WD,Matsumura T,Osterrieder N,O'Callaghan DJ

    更新日期:2004-08-01 00:00:00

  • Transmission of cotton leaf curl disease: answer to a long-standing question.

    abstract::Cotton leaf curl disease (CLCuD) has been a major constraint to cotton production across Pakistan and northwestern India since the early 1990s. The disease is caused by a number of begomoviruses, including Cotton leaf curl Multan virus (CLCuMuV), which associate with a specific host range and symptom determining betas...

    journal_title:Virus genes

    pub_type: 信件

    doi:10.1007/s11262-018-1605-9

    authors: Masood M,Briddon RW

    更新日期:2018-12-01 00:00:00

  • Vaccinia virus recombinants expressing rabiesvirus glycoprotein protect against rabies.

    abstract::Six recombinants of New York Board of Health (NYBH) vaccinia virus containing cDNA for Challenge Virus Standard (CVS) rabiesvirus glycoprotein (G) were produced by directing gene insertion into the vaccinia thymidine kinase (TK) locus. To regulate expression of G the promoter P7.5 (functions at early and late times po...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00125682

    authors: Esposito J,Brechling K,Baer G,Moss B

    更新日期:1987-11-01 00:00:00

  • Comparison of the sequence of the secretory glycoprotein A (gA) gene in Md5 and BC-1 strains of Marek's disease virus type 1.

    abstract::DNA fragments containing the secretory glycoprotein A (gA) gene of Marek's disease virus type 1 (MDV1) were cloned from the DNA libraries of very virulent Md5 and virulent BC-1 strains and sequenced. Two open reading frames (ORF1 and ORF2) were identified for both strains. The ORF1 has the potential to code for a prot...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00125125

    authors: Ihara T,Kato A,Ueda S,Ishihama A,Hirai K

    更新日期:1989-11-01 00:00:00

  • Identification of specific amino acid residues of adenovirus 12 E1A involved in transformation and p300 binding.

    abstract::The early region 1A (E1A) gene of highly oncogenic adenovirus type 12 (Ad12) was analyzed for transforming activity and protein binding using specific mutations. The Ad12 E1A proteins were found to bind p300 protein mainly within the CR1 region, although mutations that affect both p300 binding and transformation were ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1007967009156

    authors: Sawada Y,Ishino M,Miura K,Ohtsuka E,Fujinaga K

    更新日期:1997-01-01 00:00:00

  • In vitro isolation and molecular identification of reptarenavirus in Malaysia.

    abstract::Boid inclusion body disease (BIBD) is a viral disease of boids caused by reptarenavirus. In this study, tissue from naturally infected boid snakes were homogenized and propagated in African Monkey kidney (Vero) and rat embryonic fibroblast (REF) cells. Virus replication was determined by the presence of cytopathic eff...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1345-7

    authors: Abba Y,Hassim H,Hamzah H,Ibrahim OE,Ilyasu Y,Bande F,Mohd Lila MA,Noordin MM

    更新日期:2016-10-01 00:00:00

  • Full genome sequence of a Sathuvachari virus strain isolated in the southwestern-most archipelago of Japan.

    abstract::Two virus strains, tentatively designated as ON-6/P/05 and ON-7/E/05, were isolated from blood samples of healthy cattle in the Yaeyama Islands, located in the southwestern-most region of Japan, in 2005. Ultrastructural observations of infected baby hamster (BHK-21) cells revealed that the viruses had features consist...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1592-x

    authors: Kato T,Aizawa M,Takayoshi K,Yanase T,Tanaka S,Shirafuji H,Yamakawa M

    更新日期:2018-10-01 00:00:00

  • High genetic diversity and recombination events of porcine astrovirus strains identified from ill and asymptomatic pigs in 2017, Hunan Province, China.

    abstract::Astroviruses (AstV) are associated with enteric and systemic disease in mammals and birds. Astroviruses have received increased attention recently as they have been found to be associated with sporadic neurologic disease in mammals including humans. In pigs, porcine astrovirus (PoAstV) can be widely detected and has b...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-019-01692-w

    authors: Lv SL,Zhang HH,Li JY,Hu WQ,Song YT,Opriessnig T,Xiao CT

    更新日期:2019-10-01 00:00:00

  • Arenavirus phylogeny: a new insight.

    abstract::Arenaviridae is a worldwide distributed family, of enveloped, single stranded, RNA viruses. The arenaviruses were divided in two major groups (Old World and New World), based on serological properties and genetic data, as well as the geographic distribution. In this study the phylogenetic relationship among the member...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1007993525052

    authors: Albariño CG,Posik DM,Ghiringhelli PD,Lozano ME,Romanowski V

    更新日期:1998-01-01 00:00:00

  • Oncolytic viruses: adenoviruses.

    abstract::Tumor-selectively replicating (oncolytic) viruses are promising tools for therapy of solid cancers and have been initially developed to achieve potent tumor lysis with acceptable side effects on healthy tissue. However, in recent years, oncolytic viruses have been recognized as therapeutic vehicles exhibiting multipro...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1007/s11262-017-1488-1

    authors: Niemann J,Kühnel F

    更新日期:2017-10-01 00:00:00

  • A sensitive duplex nanoparticle-assisted PCR assay for identifying porcine epidemic diarrhea virus and porcine transmissible gastroenteritis virus from clinical specimens.

    abstract::In this study, a novel duplex nanoparticle-assisted polymerase chain reaction (nanoPCR) assay was developed to detect porcine epidemic diarrhea virus (PEDV) and porcine transmissible gastroenteritis virus (TGEV). Two pairs of primers were designed based on the conserved region within the N gene of PEDV and TGEV. In a ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1405-z

    authors: Zhu Y,Liang L,Luo Y,Wang G,Wang C,Cui Y,Ai X,Cui S

    更新日期:2017-02-01 00:00:00

  • Human immunodeficiency virus type-1 Tat protein induces secretory leukocyte protease inhibitor expression in African green monkey but not human cells.

    abstract::African monkeys are resistant to HIV-1 infection due to intrinsic restriction mechanisms found in their cells. However, although they can be infected by monkey-adapted modified HIV-1 particles that are designed to overcome known restriction factors, virus numbers drop to undetectable levels in immunocompetent animals....

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-020-01731-x

    authors: Özdemir S,Şengez B,Arslanoğlu A

    更新日期:2020-04-01 00:00:00

  • Wuhan large pig roundworm virus identified in human feces in Brazil.

    abstract::We report here the complete genome sequence of a bipartite virus, herein denoted WLPRV/human/BRA/TO-34/201, from a sample collected in 2015 from a two-year-old child in Brazil presenting acute gastroenteritis. The virus has 98-99% identity (segments 2 and 1, respectively) with the Wuhan large pig roundworm virus (uncl...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1557-0

    authors: Luchs A,Leal E,Komninakis SV,de Pádua Milagres FA,Brustulin R,da Aparecida Rodrigues Teles M,Gill DE,Deng X,Delwart E,Sabino EC,da Costa AC

    更新日期:2018-06-01 00:00:00

  • Molecular characterization of the full-length genome of a rabies virus isolate from India.

    abstract::Rabies is an important public health problem in South East Asia, with cases in this part of the world contributing to about 70% of the global burden. A large number of rabies cases occur in India, however, there is no organized system of surveillance and hence there is a lack of reliable data. Moreover, comprehensive ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-008-0223-3

    authors: Nagaraja T,Madhusudana S,Desai A

    更新日期:2008-06-01 00:00:00

  • Genomic characterization of Molluscum contagiosum virus type 1: identification of the repetitive DNA sequences in the viral genome.

    abstract::The genomes (188 kbp) of the prototype Molluscum contagiosum virus type 1 (MCV-1) and a variant strain (MCV-1v) were characterized by construction of the physical maps of the viral DNA for the restriction enzymes BamHI, ClaI, EcoRI, and HindIII using a defined gene library harboring the DNA sequences of the MCV-1 geno...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00125128

    authors: Bugert J,Rösen-Wolff A,Darai G

    更新日期:1989-11-01 00:00:00

  • A live gI/gE-deleted pseudorabies virus (PRV) protects weaned piglets against lethal variant PRV challenge.

    abstract::Emerging pseudorabies virus (PRV) variant has led to frequent outbreaks of PRV infection among Bartha-K61-vaccinated swine population in Chinese swine farms and caused high mortality in pigs of all age since late 2011. Here, we generated a gE/gI-deleted PRV (rPRVXJ-delgI/gE-EGFP) based on PRV variant strain (PRV-XJ) t...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-017-1454-y

    authors: Yin Y,Xu Z,Liu X,Li P,Yang F,Zhao J,Fan Y,Sun X,Zhu L

    更新日期:2017-08-01 00:00:00

  • Sequence of rice hoja blanca tenuivirus RNA-2.

    abstract::The sequence of rice hoja blanca tenuivirus RNA-2 is analysed and compared to its counter-part in rice stripe tenuivirus. The RNA encodes two proteins, in an ambisense arrangement. The 94 kD pc2, located in the complementary sense RNA, has several features typical of viral membrane (glyco)proteins, and also has region...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00284643

    authors: De Miranda JR,Muñoz M,Wu R,Hull R,Espinoza AM

    更新日期:1996-01-01 00:00:00

  • A local strain of Paprika mild mottle virus breaks L3 resistance in peppers and is accelerated in Tomato brown rugose fruit virus-infected Tm-22-resistant tomatoes.

    abstract::During October 2014, unfamiliar mild mosaic and mottling symptoms were identified on leaves of pepper (Capsicum chinense cv. Habanero) seedlings grown in the Arava valley in Israel 2-3 weeks post planting. Symptomatic plants were tested positive by ELISA using laboratory-produced antisera for tobamovirus species. Typi...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1539-2

    authors: Luria N,Smith E,Sela N,Lachman O,Bekelman I,Koren A,Dombrovsky A

    更新日期:2018-04-01 00:00:00

  • Molecular characterization of KGH, the first human isolate of rabies virus in Korea.

    abstract::The complete genome sequence of the KGH strain of the first human rabies virus, which was isolated from a skin biopsy of a patient with rabies, whose symptoms developed due to bites from a raccoon dog in 2001. The size of the KGH strain genome was determined to be 11,928 nucleotides (nt) with a leader sequence of 58 n...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-012-0850-6

    authors: Park JS,Kim CK,Kim SY,Ju YR

    更新日期:2013-04-01 00:00:00

  • Emerging viruses in the genus Comovirus.

    abstract::The intraspecies variability of capsid proteins of five viruses of the genus Comovirus was established. Inclusion of both capsid proteins to the sequence analysis reduces some uncertainties about species/strains demarcation criteria in the Comovirus genus. New approach is proposed for discrimination of Turnip ringspot...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-009-0443-1

    authors: Petrzik K,Koloniuk I

    更新日期:2010-04-01 00:00:00

  • Transcription analysis of porcine circovirus (PCV).

    abstract::This study focuses on gene expression of porcine circovirus (PCV) in order to identify viral genes and their corresponding mRNA transcripts. By northern blot analysis, the existence of three mRNAs could be demonstrated. Two mRNAs are encoded by the viral (-)-strand and one is encoded by the viral (+)-strand. The (+)-s...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008022521329

    authors: Mankertz J,Buhk HJ,Blaess G,Mankertz A

    更新日期:1998-01-01 00:00:00

  • Respiratory syncytial virus (RSV) evades the human adaptive immune system by skewing the Th1/Th2 cytokine balance toward increased levels of Th2 cytokines and IgE, markers of allergy--a review.

    abstract::Infection of infants in their first year of life, children and elderly people with the respiratory syncytial virus (RSV) endangers the life of the patient. An attempt to develop a formalin-inactivated RSV (FI-RSV) vaccine during the 1960s resulted in an aggravated infection in immunized children, leading to hospitaliz...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1007/s11262-006-0064-x

    authors: Becker Y

    更新日期:2006-10-01 00:00:00