Modeling and kinetic analysis of the reaction system using whole cells with separately and co-expressed D-hydantoinase and N-carbamoylase.

Abstract:

:We developed a kinetic model that describes a heterogeneous reaction system for the production of D-p-hydroxyphenylglycine from D,L-p-hydroxyphenyl-hydantoin using D-hydantoinase of Bacillus stearothermophilus SD1 and N-carbamoylase of Agrobacterium tumefaciens NRRL B11291. As a biocatalyst, whole cells with separately or co-expressed enzymes were used. The reaction system involves dissolution of substrate particles, enzymatic conversion, racemization of the L-form substrate, and transfer of the dissolved substrate, intermediate, and product through the cell membrane. Because the two enzymes have different pH optimum, kinetic parameters were evaluated at different pH for the reaction systems. The model was simulated using the kinetic parameters and compared with experimental data, and it was found that the kinetic model well describes the behavior of the reaction systems using whole cells with separately and co-expressed enzymes. Factors affecting the kinetics of the reaction systems were analyzed on the basis of the kinetic model. In the reaction system with separately expressed enzymes, racemization rate and transport of the reaction intermediate (N-carbamoyl-D-p-hydroxyphenylglycine) were revealed to be the limiting factors at neutral pH, resulting in accumulation of intermediate in the reaction medium. At alkaline condition, on the other hand, inhibition of N-carbamoylase by ammonia was severe, and thereby the reaction rate significantly reduced. In the co-expressed enzyme system, accumulation of intermediate was negligible in the reaction medium, and the improved performance was observed compared to that with separately expressed enzymes. The present model might be applied for the optimization and development of the reaction system using two sequential enzymes.

journal_name

Biotechnol Bioeng

authors

Park JH,Oh KH,Lee DC,Kim HS

doi

10.1002/bit.10259

subject

Has Abstract

pub_date

2002-06-30 00:00:00

pages

779-93

issue

7

eissn

0006-3592

issn

1097-0290

journal_volume

78

pub_type

杂志文章
  • The effect of organic solvents on the equilibrium position of enzymatic acylglycerol synthesis.

    abstract::The effect of organic solvents on the equilibrium position of lipase-catalyzed esterification of glycerol and decanoic acid has been investigated. The reaction is carried out in an aqueous-organic two-phase system. In polar solvents, high mole fractions of monoacylglycerol and low mole fractions of triacylglycerol and...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260410113

    authors: Janseen AE,Van der Padt A,Van Sonsbeek HM,Van't Riet K

    更新日期:1993-01-05 00:00:00

  • Conversion of pentoses by yeasts.

    abstract::The utilization and conversion of D-xylose, D-xylulose, L-arabinose, and xylitol by yeast strains have been investigated with the following results: (1) The majority of yeasts tested utilize D-xylose and produce polyols, ethanol, and organic acids. The type and amount of products formed varies with the yeast strains u...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260250108

    authors: Gong CS,Claypool TA,McCracken LD,Maun CM,Ueng PP,Tsao GT

    更新日期:1983-01-01 00:00:00

  • Yield and maintenance relations of yeast growth in the chemostat at superoptimal temperatures.

    abstract::A model is proposed that accounts for the decreases in yield which occur in chemostat cultures of mesophilic yeasts at superoptimal growth temperatures. Two yield depressing effects were identified, one due to increased maintenance requirements by the viable fraction of the population, the other due to energy substrat...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260180603

    authors: Van Uden N,Madeira-Lopes A

    更新日期:1976-06-01 00:00:00

  • Improved virus purification processes for vaccines and gene therapy.

    abstract::The downstream processing of virus particles for vaccination or gene therapy is becoming a critical bottleneck as upstream titers keep improving. Moreover, the growing pressure to develop cost-efficient processes has brought forward new downstream trains. This review aims at analyzing the state-of-the-art in viral dow...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章,评审

    doi:10.1002/bit.25545

    authors: Nestola P,Peixoto C,Silva RR,Alves PM,Mota JP,Carrondo MJ

    更新日期:2015-05-01 00:00:00

  • Improvement of the production of GFPuv-beta1,3-N-acetylglucosaminyltransferase 2 fusion protein using a molecular chaperone-assisted insect-cell-based expression system.

    abstract::A stable Tn-5B1-4 insect cell line co-expressing the recombinant GFPuv-beta1,3-N-acetylglucosaminyltransferase 2 (GFPuv-beta3GnT2) protein fused to a melittin signal sequence with a lectin-like molecular chaperone, human calnexin (hCNX) or human calreticulin (hCRT), was constructed. The expression of either of these m...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20362

    authors: Kato T,Murata T,Usui T,Park EY

    更新日期:2005-02-20 00:00:00

  • Effect of heat-shock proteins for relieving physiological stress and enhancing the production of penicillin acylase in Escherichia coli.

    abstract::High-level expression of recombinant penicillin acylase (PAC) using the strong trc promoter system in Escherichia coli is frequently limited by the processing and folding of PAC precursors (proPAC) in the periplasm, resulting in physiological stress and inclusion body formation in this compartment. Periplasmic heat-sh...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21161

    authors: Wu MS,Pan KL,Chou CP

    更新日期:2007-04-01 00:00:00

  • Temperature control of growth and productivity in mutant Chinese hamster ovary cells synthesizing a recombinant protein.

    abstract::The use of a temperature switch to control the growth and productivity of temperature-sensitive (ts) mutants was investigated to extend the productive life span of recombinant Chinese hamster ovary (CHO) cells in batch culture. Bromodeoxyuridine was used at 39 degrees C to select mutagenized CHO-K1 cells, which result...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260420903

    authors: Jenkins N,Hovey A

    更新日期:1993-11-05 00:00:00

  • Fibrous proteins: At the crossroads of genetic engineering and biotechnological applications.

    abstract::Fibrous proteins, such as silk, elastin and collagen are finding broad impact in biomaterial systems for a range of biomedical and industrial applications. Some of the key advantages of biosynthetic fibrous proteins compared to synthetic polymers include the tailorability of sequence, protein size, degradation pattern...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章,评审

    doi:10.1002/bit.25820

    authors: Yigit S,Dinjaski N,Kaplan DL

    更新日期:2016-05-01 00:00:00

  • Encapsulating chondrocytes in degrading PEG hydrogels with high modulus: engineering gel structural changes to facilitate cartilaginous tissue production.

    abstract::A major challenge when designing cell scaffolds for chondrocyte delivery in vivo is creating scaffolds with sufficient mechanical properties to restore initial function while simultaneously controlling temporal changes in the gel structure to facilitate tissue formation. To address this design challenge, degradable ph...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20160

    authors: Bryant SJ,Bender RJ,Durand KL,Anseth KS

    更新日期:2004-06-30 00:00:00

  • Osteochondral tissue coculture: An in vitro and in silico approach.

    abstract::Osteochondral tissue engineering aims to regenerate functional tissue-mimicking physiological properties of injured cartilage and its subchondral bone. Given the distinct structural and biochemical difference between bone and cartilage, bilayered scaffolds, and bioreactors are commonly employed. We present an osteocho...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27127

    authors: Xue R,Chung B,Tamaddon M,Carr J,Liu C,Cartmell SH

    更新日期:2019-11-01 00:00:00

  • Kinetics of ethanol inhibition in alcohol fermentation.

    abstract::The inhibitory effect of ethanol on yeast growth and fermentation has been studied for the strain Saccharomyces cerevisiae ATCC No. 4126 under anaerobic batch conditions. The results obtained reveal that there is no striking difference between the response of growth and ethanol fermentation. Two kinetic models are als...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260270311

    authors: Luong JH

    更新日期:1985-03-01 00:00:00

  • Metabolic model for acetate uptake by a mixed culture of phosphate- and glycogen-accumulating organisms under anaerobic conditions.

    abstract::This paper proposes a new metabolic model for acetate uptake by a mixed culture of phosphate- and glycogen-accumulating organisms (PAOs and GAOs) under anaerobic conditions. The model uses variable overall stoichiometry based on the assumption that PAOs may have the ability of using the glyoxylate pathway to produce t...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10765

    authors: Yagci N,Artan N,Cokgör EU,Randall CW,Orhon D

    更新日期:2003-11-05 00:00:00

  • Biocatalytic process optimization based on mechanistic modeling of cholic acid oxidation with cofactor regeneration.

    abstract::Reduction and oxidation of steroids in the human gut are catalyzed by hydroxysteroid dehydrogenases of microorganisms. For the production of 12-ketochenodeoxycholic acid (12-Keto-CDCA) from cholic acid the biocatalytic application of the 12α-hydroxysteroid dehydrogenase of Clostridium group P, strain C 48-50 (HSDH) is...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.23047

    authors: Braun M,Link H,Liu L,Schmid RD,Weuster-Botz D

    更新日期:2011-06-01 00:00:00

  • Cellulase activity in commercial lipase preparations.

    abstract::Polymeric membranes are increasingly used as supports for the immobilization of enzymes in bioreactors. One of the more common reactor types employed in lipase-catalyzed hydrolysis of oils, contains modified cellulose as a membrane material. We found that this type of material is readily attacked by cellulase present ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260400714

    authors: Derksen JT,Boswinkel G,Cuperus FP

    更新日期:1992-10-05 00:00:00

  • Metabolic engineering of Bacillus subtilis for production of D-lactic acid.

    abstract::Poly lactic acid (PLA) based plastics is renewable, bio-based, and biodegradable. Although present day PLA is composed of mainly L-LA, an L- and D- LA copolymer is expected to improve the quality of PLA and expand its use. To increase the number of thermotolerant microbial biocatalysts that produce D-LA, a derivative ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26472

    authors: Awasthi D,Wang L,Rhee MS,Wang Q,Chauliac D,Ingram LO,Shanmugam KT

    更新日期:2018-02-01 00:00:00

  • Leveraging flow mechanics to determine critical process and scaling parameters in a continuous viral inactivation reactor.

    abstract::A continuous viral inactivation (CVI) chamber has been designed to operate with acceptable residence time distribution (RTD) characteristics. However, altering the CVI's geometry and operation to accommodate the scale was not obvious. In this work, we elucidate the influence of Dean vortices and leverage the transitio...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27223

    authors: Brown MR,Orozco R,Coffman J

    更新日期:2020-03-01 00:00:00

  • Efficient enzymatic acrylation through transesterification at controlled water activity.

    abstract::Enzymatic acrylation is a process of potentially strong interest to the chemical industry. Direct esterification involving acrylic acid is unfortunately rather slow, with inhibition phenomena appearing at high acid concentrations. In the present study the acrylation of 1-octanol catalyzed by immobilized Candida antarc...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21706

    authors: Nordblad M,Adlercreutz P

    更新日期:2008-04-15 00:00:00

  • Peptides derived from a secretory yeast library restore factor VIII activity in the presence of an inhibitory antibody.

    abstract::The development of autoantibodies against factor VIII represents one of the major complications in the treatment of hemophilia A patients. We have employed a novel library system to obtain peptides that specifically neutralize the interaction between factor VIII and these inhibitors. The random peptides are presented ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21426

    authors: Mersich C,Billes W,Pabinger I,Jungbauer A

    更新日期:2007-09-01 00:00:00

  • Influence of the cycle length on the production of PHA and polyglucose from glycerol by bacterial enrichments in sequencing batch reactors.

    abstract::PHA, a naturally occurring biopolymer produced by a wide range of microorganisms, is known for its applications as bioplastic. In recent years the use of agro-industrial wastewater as substrate for PHA production by bacterial enrichments has attracted considerable research attention. Crude glycerol as generated during...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.24991

    authors: Moralejo-Gárate H,Palmeiro-Sánchez T,Kleerebezem R,Mosquera-Corral A,Campos JL,van Loosdrecht MC

    更新日期:2013-12-01 00:00:00

  • Studies on immobilized Saccharomyces cerevisiae. I. Analysis of continuous rapid ethanol fermentation in immobilized cell reactor.

    abstract::Rapid fermentation of cane molasses into ethanol has been studied in batch, continuous (free-cell and cell-immobilized systems) by a strain of Saccharomyces cerevisiae at temperature 30 degrees C and pH 5.0. The maximum productivity of ethanol obtained in immobilized system was 28.6 g L(-1) h(-1). The cells were immob...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260240403

    authors: Tyagi RD,Ghose TK

    更新日期:1982-04-01 00:00:00

  • A comparison of two empirical models for the enzymatic hydrolysis of pretreated poplar wood.

    abstract::Two empirical models for the enzymatic hydrolysis of cellulose are used to analyze the same set of experimental data to determine if one model is superior to the other. Both models adequately describe the data. The parameters in both models may be correlated to the hydrolysis conditions of enzyme, substrate, and produ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260260818

    authors: Holtzapple MT,Caram HS,Humphrey AE

    更新日期:1984-08-01 00:00:00

  • Kinetic and thermal characteristics of enzyme-graft copolymers.

    abstract::The characteristics of horseradish peroxidase (HRP) immobilized onto Sepharose by a photochemical-initiated graft copolymerization are presented. Active copolymers were synthesized using different amounts of glycidylmethacrylate (GMA), bisacryloylpiperazine (BAP), or 1,3,5-hexhydrotriacryloyl-(s)-triazine (HTsT) as fu...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260250310

    authors: Cremonesi P,D'Angiuro L

    更新日期:1983-03-01 00:00:00

  • Oxygen transfer rates in a mammalian cell culture bioreactor equipped with a cell-lift impeller.

    abstract::Measurements of k(L)a were carried out in 1. 5- and 5-L New Brunswick Scientific CelliGen bioreactors. The measured k(L)a in water were identical for both vessel sizes operated in similar condition. The mass transfer rate increased with temperature, mixing speed, and aeration rate, with this last parameter being the m...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260350107

    authors: Johnson M,André G,Chavarie C,Archambault J

    更新日期:1990-01-05 00:00:00

  • Reference and counter electrode positions affect electrochemical characterization of bioanodes in different bioelectrochemical systems.

    abstract::The placement of the reference electrode (RE) in various bioelectrochemical systems is often varied to accommodate different reactor configurations. While the effect of the RE placement is well understood from a strictly electrochemistry perspective, there are impacts on exoelectrogenic biofilms in engineered systems ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.25253

    authors: Zhang F,Liu J,Ivanov I,Hatzell MC,Yang W,Ahn Y,Logan BE

    更新日期:2014-10-01 00:00:00

  • Fermentation and isolation of C10-deacetylase for the production of 10-deacetylbaccatin III from baccatin III.

    abstract::10-Deacetylabaccatin III (10 DAB), an important precursor for paclitaxel semisynthesis, is enhanced in yew extracts using C10-deacetylase and C13-deacylase enzymes.(4) C10-deacetylase is an intracellular enzyme produced by the fermentation of a soil microorganism, Nocardioides luteus (SC 13912). During the fermentatio...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260480518

    authors: Nanduri VB,Hanson RL,Laporte TL,Ko RY,Patel RN,Szarka LJ

    更新日期:1995-12-05 00:00:00

  • Oxidation of an inhibitory substrate by washed cells (oxidation of phenol by Pseudomonas putida).

    abstract::The specific uptake rate of phenol by washed cells of Pseudomonas putida grown on phenol in steady-state continuous culture at various dilution rates was studied. The Monod-Haldane-type equation was applied to fit the data and the best kinetic parameters were determined by nonlinear least-squares techniques. The value...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260300802

    authors: Sokol W

    更新日期:1987-12-05 00:00:00

  • Design of short membrane selective antimicrobial peptides containing tryptophan and arginine residues for improved activity, salt-resistance, and biocompatibility.

    abstract::Antimicrobial peptides (AMPs) kill microbes by non-specific membrane permeabilization, making them ideal templates for designing novel peptide-based antibiotics that can combat multi-drug resistant pathogens. For maximum efficacy in vivo and in vitro, AMPs must be biocompatible, salt-tolerant and possess broad-spectru...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.25003

    authors: Saravanan R,Li X,Lim K,Mohanram H,Peng L,Mishra B,Basu A,Lee JM,Bhattacharjya S,Leong SS

    更新日期:2014-01-01 00:00:00

  • Microbial degradation of quinoline: Kinetic studies with Comamonas acidovorans DSM 6426.

    abstract::The microbial degradation of quinoline by Comamonas acidovorans was studied in a laboratory scale stirred tank reactor. In continuous culture experiments using quinoline as a sole source of carbon and nitrogen, it was shown by means of mass balances that quinoline was converted completely to biomass, carbon dioxide, a...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260420506

    authors: Miethling R,Hecht V,Deckwer WD

    更新日期:1993-08-20 00:00:00

  • Steric and electrostatic interactions govern nanofiltration of amino acids.

    abstract::Crossflow nanofiltration experiments were performed to investigate the factors influencing the removal of amino acids by a commercially available polymeric thin-film composite membrane. The removals of five monoprotic (Ala, Val, Leu, Gly, and Thr), one diprotic (Asp), and one dibasic (Arg) amino acids in a range of pe...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21395

    authors: Shim Y,Chellam S

    更新日期:2007-10-01 00:00:00

  • Fabrication of nanofibers with antimicrobial functionality used as filters: protection against bacterial contaminants.

    abstract::A comparative study of antimicrobial activity is done using three different electrospun nanofibers namely-CA, PAN, and PVC used as control and with various amounts of AgNO(3) being treated with UV-irradiation leading to the enhancement of silver nanoparticles. DMF is used as the common solvent which helps to undergo s...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21351

    authors: Lala NL,Ramaseshan R,Bojun L,Sundarrajan S,Barhate RS,Ying-Jun L,Ramakrishna S

    更新日期:2007-08-15 00:00:00