Mass spectrometric characterization of the human androgen receptor ligand-binding domain expressed in Escherichia coli.

Abstract:

:The ligand-binding domain (LBD) of the human androgen receptor (hAR LBD), encompassing amino acids (AAs) 647-919, was expressed in Escherichia coli with an N-terminal polyhistidine tag (His(10)-hAR LBD) from a pET-16b vector. The overexpressed protein was initially insoluble in inclusion bodies, and was subsequently solubilized in 8 M guanidine hydrochloride (GdnHCl). The solubilized His(10)-hAR LBD was purified to apparent homogeneity by metal ion affinity chromatography in the presence of 6 M GdnHCl. The isolated protein migrated as a single band in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) with an apparent molecular mass of 33-34 kDa, as expected from the plasmid construct. Immunoblot analysis with C-terminal antibodies raised against a peptide corresponding to the last 19 AAs (AAs 901-919) of hAR revealed that the purified protein contained an immunoreactive epitope present within the AR and was of the appropriate size. Further characterization, using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI/TOF-MS), showed a single protein species of average mass 34 580 Da, confirming the size and purity of the purified His(10)-hAR LBD. Detailed tryptic peptide mapping analysis, using MALDI/TOF-MS, identified a total of eight peptides with a 30% coverage of the LBD, including the last tryptic peptide in the hAR sequence. These data confirm that the purified protein was the intact hAR LBD. AA sequencing of these tryptic peptides, using an HPLC-coupled electrospray ionization ion trap mass spectrometer (LC/ESI-ITMS and MS/MS), unambiguously confirmed that the peptides were from the hAR LBD. The purified His(10)-hAR LBD in 6 M GdnHCl could be renatured as determined by ligand-binding activity, with a similar equilibrium dissociation constant (K(d)) for [(3)H]-mibolerone and a similar steroid specificity to the AR isolated from rat ventral prostate.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Zhu Z,Becklin RR,Desiderio DM,Dalton JT

doi

10.1021/bi010525j

subject

Has Abstract

pub_date

2001-09-11 00:00:00

pages

10756-63

issue

36

eissn

0006-2960

issn

1520-4995

pii

bi010525j

journal_volume

40

pub_type

杂志文章
  • Interaction of myosin subfragments with F-actin.

    abstract::The effect of ionic strength, temperature, and divalent cations on the association of myosin with actin was determined in the ultracentrifuge using scanning absorption optics. The association constant (Ka) for the binding of heavy meromyosin (HmM) to F-actin was 1 X 10(7) M-1 at 20 degrees C, in 0.10 M KCl, 0.01 M imi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00618a017

    authors: Margossian SS,Lowey S

    更新日期:1978-12-12 00:00:00

  • Equilibrium folding studies of cellular retinoic acid binding protein, a predominantly beta-sheet protein.

    abstract::We have examined the conformational behavior under various unfolding conditions of a predominantly beta-sheet protein, cellular retinoic acid binding protein (CRABP). Urea unfolding-refolding of CRABP is a highly cooperative process that can be approximated by a two-state model. Acid denaturation is also cooperative a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00167a017

    authors: Liu ZP,Rizo J,Gierasch LM

    更新日期:1994-01-11 00:00:00

  • Characterization of recombinant Saccharomyces cerevisiae manganese-containing superoxide dismutase and its H30A and K170R mutants expressed in Escherichia coli.

    abstract::All known Mn-containing superoxide dismutases (MnSODs) have a highly conserved histidine (His-30 in Escherichia coli FeSOD) in the active-site channel, and nearly all have an active-site arginine (Arg-170) that has been proposed to play a combined structural and functional role [Chan et al., Arch. Biochem. Biophys. 27...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980167t

    authors: Borders CL Jr,Bjerrum MJ,Schirmer MA,Oliver SG

    更新日期:1998-08-11 00:00:00

  • Heparin prevents the binding of phospholipase A2 to phospholipid micelles: importance of the amino-terminus.

    abstract::The activity of the major isoform of porcine pancreatic phospholipase A2 (PLA2), designated B-PLA2, against micellar substrates is inhibited by heparin. Inhibition is a consequence of binding of the enzyme to heparin, documented by a heparin-induced alteration in the intrinsic fluorescence of B-PLA2 and in the 8-anili...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00101a026

    authors: Diccianni MB,Lilly-Stauderman M,McLean LR,Balasubramaniam A,Harmony JA

    更新日期:1991-09-17 00:00:00

  • A structural limitation on enzyme activity: the case of HMG-CoA synthase.

    abstract::Recent structural studies of the HMG-CoA synthase members of the thiolase superfamily have shown that the catalytic loop containing the nucleophilic cysteine follows the phi and psi angle pattern of a II' beta turn. However, the i + 1 residue is conserved as an alanine, which is quite unusual in this position as it mu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi061505q

    authors: Steussy CN,Robison AD,Tetrick AM,Knight JT,Rodwell VW,Stauffacher CV,Sutherlin AL

    更新日期:2006-12-05 00:00:00

  • Direct sugar binding to LacY measured by resonance energy transfer.

    abstract::Trp151 in the lactose permease of Escherichia coli (LacY) is an important component of the sugar-binding site and the only Trp residue out of six that is in close proximity to the galactopyranoside in the structure (1PV7). The short distance between Trp151 and the sugar is favorable for Förster resonance energy transf...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi061632m

    authors: Smirnova IN,Kasho VN,Kaback HR

    更新日期:2006-12-26 00:00:00

  • Deletions in the interdomain hinge region of flavocytochrome b2: effects on intraprotein electron transfer.

    abstract::The two distinct domains of flavocytochrome b2 (L-lactate:cytochrome c oxidoreductase, EC 1.1.2.3) are connected by a typical hinge peptide. To probe the importance of the structural integrity of the hinge region for efficient intraprotein electron transfer, three mutant enzymes have been constructed: H delta 3 [Sharp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi950457z

    authors: Sharp RE,Chapman SK,Reid GA

    更新日期:1996-01-23 00:00:00

  • Cholesterol dynamics in membranes of raft composition: a molecular point of view from 2H and 31P solid-state NMR.

    abstract::Lipidic membrane systems that have been reported to be composed of sphingomyelin (SM)-cholesterol (Chol) microdomains or "rafts" by Dietrich et al. [palmitoyloleoyl-phosphatidylcholine(POPC)/SM/Chol, 1/1/1; Dietrich, C., Bagatolli, L. A., Volovyk, Z. N., Thompson, N. L., Levi, M., Jacobson, K., and Gratton, E. (2001) ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi026717b

    authors: Aussenac F,Tavares M,Dufourc EJ

    更新日期:2003-02-18 00:00:00

  • The crystal structure of eosinophil cationic protein in complex with 2',5'-ADP at 2.0 A resolution reveals the details of the ribonucleolytic active site.

    abstract::Eosinophil cationic protein (ECP) is a component of the eosinophil granule matrix. It shows marked toxicity against helminth parasites, bacteria single-stranded RNA viruses, and host epithelial cells. Secretion of human ECP is related to eosinophil-associated allergic, asthmatic, and inflammatory diseases. ECP belongs...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0264521

    authors: Mohan CG,Boix E,Evans HR,Nikolovski Z,Nogués MV,Cuchillo CM,Acharya KR

    更新日期:2002-10-08 00:00:00

  • Inhibition of ricin A-chain with pyrrolidine mimics of the oxacarbenium ion transition state.

    abstract::Ricin A-chain (RTA) catalyzes the hydrolytic depurination of a specific adenosine at position 4324 of 28S rRNA. Kinetic isotope effects on the hydrolysis of a small 10mer stem-tetraloop oligonucleotide substrate established the mechanism of the reaction as D(N)*A(N), involving an oxacarbenium ion intermediate in a hig...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0498499

    authors: Roday S,Amukele T,Evans GB,Tyler PC,Furneaux RH,Schramm VL

    更新日期:2004-05-04 00:00:00

  • Affinity selection of chemically modified proteins: role of lysyl residues in the binding of calmodulin to calcineurin.

    abstract::In affinity selection, calcineurin selects from a population of randomly modified calmodulins those species with which it prefers to interact. The method shows that acetylation of lysines affects calmodulin so as to interfere with its ability to interact with calcineurin. Monoacetylation of any lysine of calmodulin re...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00379a026

    authors: Manalan AS,Klee CB

    更新日期:1987-03-10 00:00:00

  • Interaction of DNA polymerase I of Escherichia coli with nucleotides. Antagonistic effects of single-stranded polynucleotide homopolymers.

    abstract::Binding of deoxyribonucleoside 5'-triphosphates to DNA polymerase I of Escherichia coli was measured by using a microscale nonequilibrium dialysis method. It allowed rapid and economic measurement of dissociation constants, with negligible interfering side reactions. A stoichiometry of 1 mol of nucleoside 5'-triphosph...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00335a033

    authors: Muise O,Holler E

    更新日期:1985-07-02 00:00:00

  • Conformational characteristics of luliberin. Luminescence properties at liquid-nitrogen temperature.

    abstract::The luminescence properties (fluorescence and phosphorescence) of luliberin have been investigated at liquid-nitrogen temperature (77 K) in 50% ethylene glycolaqueous buffer at various pH's. Calculation of the energy-transfer efficiency between Trp and Tyr residues leads to an evaluation of the distance separating the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00671a009

    authors: Marche P,Montenay-Garestier T,Fromageot P,Hélène C

    更新日期:1976-12-28 00:00:00

  • Uniform 13C isotope labeling of proteins with sodium acetate for NMR studies: application to human carbonic anhydrase II.

    abstract::Uniform double labeling of proteins for NMR studies can be prohibitively expensive, even with an efficient expression and purification scheme, due largely to the high cost of [13C6, 99%]glucose. We demonstrate here that uniformly (greater than 95%) 13C and 15N double-labeled proteins can be prepared for NMR structure/...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00232a017

    authors: Venters RA,Calderone TL,Spicer LD,Fierke CA

    更新日期:1991-05-07 00:00:00

  • Domain organization and a protease-sensitive loop in eukaryotic ornithine decarboxylase.

    abstract::Trypanosoma brucei ornithine decarboxylase was reconstituted by coexpression of two polypeptides corresponding to residues 1-305 and residues 306-425 in Escherichia coli. The two peptides were coexpressed, at wild-type levels, from a single transcriptional unit that was separated by a 15-nucleotide untranslated region...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00041a021

    authors: Osterman AL,Lueder DV,Quick M,Myers D,Canagarajah BJ,Phillips MA

    更新日期:1995-10-17 00:00:00

  • Klenow fragment-DNA interaction required for the incorporation of nucleotides opposite guanine and O6-methylguanine.

    abstract::A mechanism by which the Klenow fragment of DNA polymerase I monitors the geometry of the base pairs may involve hydrogen bonds between the polymerase and the minor groove of the nascent base pair. The involvement of the 3-position of guanine in the template strand was examined by synthesizing oligodeoxynucleotides co...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971253g

    authors: Spratt TE

    更新日期:1997-10-28 00:00:00

  • Acylation of myelin basic protein peptide 1-21 with alkyl carboxylates 2-10 carbons long affects secondary structure and posttranslational modification.

    abstract::A peptide consisting of the first 21 residues of human myelin basic protein (MBP) was synthesized. The N-terminal alanine of portions was blocked in separate experiments with alkyl carboxylates varying in size from 2 to 10 carbon atoms. The effects of these different alkyl carboxylates at the N-terminus on the seconda...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00180a008

    authors: Costentino M,Pritzker L,Boulias C,Moscarello MA

    更新日期:1994-04-12 00:00:00

  • Conformations of cytochrome oxidase: thermodynamic evaluation of the interconversion of the 418- and 428-nm forms.

    abstract::Oxidized cytochrome c oxidase exists in two reasonably well-defined conformations, a high-spin conformation with maximal absorption at 418 nm and a low-spin conformation with maximal absorption at 428 nm. The equilibrium between these two conformations has been studied as a function of pH, pressure, and temperature. p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00265a009

    authors: Kornblatt JA,Hui Bon Hoa G

    更新日期:1982-10-26 00:00:00

  • Self-Competitive Inhibition of the Bacteriophage P22 Tailspike Endorhamnosidase by O-Antigen Oligosaccharides.

    abstract::The P22 tailspike endorhamnosidase confers the high specificity of bacteriophage P22 for some serogroups of Salmonella differing only slightly in their O-antigen polysaccharide. We used several biophysical methods to study the binding and hydrolysis of O-antigen fragments of different lengths by P22 tailspike protein....

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.0c00872

    authors: Baxa U,Weintraub A,Seckler R

    更新日期:2020-12-29 00:00:00

  • Structure and catalytic mechanism of N(5),N(10)-methenyl-tetrahydromethanopterin cyclohydrolase.

    abstract::Methenyltetrahydromethanopterin (methenyl-H(4)MPT(+)) cyclohydrolase (Mch) catalyzes the interconversion of methenyl-H(4)MPT(+) and formyl-H(4)MPT in the one-carbon energy metabolism of methanogenic, methanotrophic, and sulfate-reducing archaea and of methylotrophic bacteria. To understand the catalytic mechanism of t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300777k

    authors: Upadhyay V,Demmer U,Warkentin E,Moll J,Shima S,Ermler U

    更新日期:2012-10-23 00:00:00

  • A vibrational analysis of the catalytically important C4-H bonds of NADH bound to lactate or malate dehydrogenase: ground-state effects.

    abstract::We have measured the frequency of the carbon-hydrogen stretching mode of the pro-R and pro-S C4-H bonds of NADH in solution and when bound to pig heart lactate (LDH) or mitochondrial malate (mMDH) dehydrogenases. This is achieved by specifically deuterating the C4 pro-R or pro-S hydrogens of NADH and determining the f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00136a022

    authors: Deng H,Zheng J,Sloan D,Burgner J,Callender R

    更新日期:1992-06-02 00:00:00

  • Interactions of anilinoacridines with nucleic acids: effects of substituent modifications on DNA-binding properties.

    abstract::Spectroscopic methods are used to probe the interactions of several anilinoacridine analogues with calf thymus DNA over a wide range of temperatures and sodium chloride concentrations. The structurally similar compounds m-AMSA, AMSA (both active as antitumor agents), and o-AMSA (inactive as an antitumor agent) have be...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00231a025

    authors: Wadkins RM,Graves DE

    更新日期:1991-04-30 00:00:00

  • X-ray and EPR Characterization of the Auxiliary Fe-S Clusters in the Radical SAM Enzyme PqqE.

    abstract::The Radical SAM (RS) enzyme PqqE catalyzes the first step in the biosynthesis of the bacterial cofactor pyrroloquinoline quinone, forming a new carbon-carbon bond between two side chains within the ribosomally synthesized peptide substrate PqqA. In addition to the active site RS 4Fe-4S cluster, PqqE is predicted to ha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b01097

    authors: Barr I,Stich TA,Gizzi AS,Grove TL,Bonanno JB,Latham JA,Chung T,Wilmot CM,Britt RD,Almo SC,Klinman JP

    更新日期:2018-02-27 00:00:00

  • The amino-terminal tail of glycogen phosphorylase is a switch for controlling phosphorylase conformation, activation, and response to ligands.

    abstract::Glycogen phosphorylase is a muscle enzyme which metabolizes glycogen, producing glucose-1-phosphate, which can be used for the production of ATP. Phosphorylase activity is regulated by phosphorylation/dephosphorylation, and by the allosteric binding of numerous effectors. In this work, we have studied 10 site-directed...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0020372

    authors: Biorn AC,Graves DJ

    更新日期:2001-05-01 00:00:00

  • Neoprontosil binding to carbonic anhydrase. Reasonance Raman and other studies on the ionization behavior of the sulfonamide.

    abstract::Alkalimetric, spectrophotometric, NMR, and resonance Raman titrations are reported for the sulfonamide Neoprontosil in aqueous solution. An assignment of the magnetic resonance peaks for each of the Neoprontosil protons has been made. Neoprontosil is shown to have two "coupled" iity of the microscopic pKs for these tw...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00580a024

    authors: Carey PR,King RW

    更新日期:1979-06-26 00:00:00

  • Biogenesis of the secretory granule: chromogranin A coiled-coil structure results in unusual physical properties and suggests a mechanism for granule core condensation.

    abstract::The secretory pro-hormone chromogranin A (CHGA) is densely packed into storage granules along with catecholamines, playing a catalytic role in granule biogenesis. 3-Dimensional structural data on CHGA are lacking. We found a superfamily structural homology for CHGA in the tropomyosin family of alpha-helical coiled-coi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi700704r

    authors: Mosley CA,Taupenot L,Biswas N,Taulane JP,Olson NH,Vaingankar SM,Wen G,Schork NJ,Ziegler MG,Mahata SK,O'Connor DT

    更新日期:2007-09-25 00:00:00

  • Electrophoretic analysis of substrate-attached proteins from normal and virus-transformed cells.

    abstract::The proteins which have been left tightly bound to the tissue culture substrate after ethylenebis (oxyethyl-enenitrilo) tetraacetic acid (EGTA)-mediated removal of normal, virus-transformed, and revertant mouse cells and which have been implicated in the substrate adhesion process have been analyzed by slab sodium dod...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00663a028

    authors: Culp LA

    更新日期:1976-09-07 00:00:00

  • A rotary mechanism for coenzyme B(12) synthesis by adenosyltransferase.

    abstract::Adenosyltransferases (ATRs) catalyze the synthesis of the reactive cobalt-carbon bond found in coenzyme B(12) or 5'-deoxyadenosylcobalamin (AdoCbl), which serves as a cofactor for a number of isomerases. The reaction involves a reductive adenosylation of cob(II)alamin in which an electron delivered by a reductase redu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi900454s

    authors: Padovani D,Banerjee R

    更新日期:2009-06-16 00:00:00

  • Increased Turnover at Limiting O2 Concentrations by the Thr(387) → Ala Variant of HIF-Prolyl Hydroxylase PHD2.

    abstract::PHD2 is a 2-oxoglutarate, non-heme Fe(2+)-dependent oxygenase that senses O2 levels in human cells by hydroxylating two prolyl residues in the oxygen-dependent degradation domain (ODD) of HIF1α. Identifying the active site contacts that determine the rate of reaction at limiting O2 concentrations is crucial for unders...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi501540c

    authors: Pektas S,Taabazuing CY,Knapp MJ

    更新日期:2015-05-12 00:00:00

  • Ultrastructure, pharmacologic inhibition, and transport selectivity of aquaporin channel-forming integral protein in proteoliposomes.

    abstract::Reconstitution of highly purified aquaporin CHIP (channel-forming integral protein) into proteoliposomes was previously shown to confer high osmotic water permeability (Pf) to the membranes [Zeidel et al. (1992) Biochemistry 31, 7436-7440]. Here we report detailed ultrastructural, pharmacologic, and transport studies ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00172a042

    authors: Zeidel ML,Nielsen S,Smith BL,Ambudkar SV,Maunsbach AB,Agre P

    更新日期:1994-02-15 00:00:00