Genomic characterization, localization, and functional expression of FGL2, the human gene encoding fibroleukin: a novel human procoagulant.

Abstract:

:For diseases in which thrombosis plays a pivotal role, such as virus-induced fulminant hepatitis, fetal loss syndrome, and xenograft rejection, the major procoagulant has remained elusive. Here we describe the isolation and functional expression of a distinct human prothrombinase, termed FGL2. The murine fgl2 gene product has been implicated in the pathophysiology of murine fulminant hepatitis. The predicted ORF corresponds to a 439-amino-acid type II integral membrane protein that contains a carboxy-terminal Fibrinogen-related domain. Functional analysis showed that FGL2-encoded protein is indeed a prothrombinase. This enzyme is a serine protease and directly cleaves prothrombin to thrombin. The FGL2 gene is a single-copy gene in the haploid human genome and has two exons separated by a 2195-bp intron expressing two mRNA transcripts of 1.5 and 5.0 kb. The 5'-flanking region contains putative cis-elements including a TATA box, an AP1 site, CEBP sites, Sp1 site, and Ets binding domains. By both radiation hybrid analyses and fluorescence in situ hybridization, human FGL2 was localized to 7q11.23.

journal_name

Genomics

journal_title

Genomics

authors

Yuwaraj S,Ding J,Liu M,Marsden PA,Levy GA

doi

10.1006/geno.2000.6444

subject

Has Abstract

pub_date

2001-02-01 00:00:00

pages

330-8

issue

3

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(00)96444-9

journal_volume

71

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Isolation and fine mapping of 16 novel human zinc finger-encoding cDNAs identify putative candidate genes for developmental and malignant disorders.

    abstract::We have isolated and chromosomally fine-mapped 16 novel genes belonging to the human zinc finger Krüppel family (ZNF131-140, 142, 143, 148, 151, 154, and 155), including 1 of the GLI type (ZNF143) and 3 containing a KRAB (Krüppel-associated box) segment (ZNF133, 136, and 140). Based on their map position, several of t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1040

    authors: Tommerup N,Vissing H

    更新日期:1995-05-20 00:00:00

  • Molecular characterization of the gene for human interleukin-1 beta converting enzyme (IL1BC).

    abstract::Interleukin-1 beta (IL-1 beta) mediates a wide range of immune and inflammatory responses. The active cytokine is generated by proteolytic cleavage of an inactive precursor by a protease called the IL-1 beta converting enzyme (ICE). A cDNA encoding this protease was recently isolated. A human genomic clone containing ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1202

    authors: Cerretti DP,Hollingsworth LT,Kozlosky CJ,Valentine MB,Shapiro DN,Morris SW,Nelson N

    更新日期:1994-04-01 00:00:00

  • Probing the S100 protein family through genomic and functional analysis.

    abstract::The EF-hand superfamily of calcium binding proteins includes the S100, calcium binding protein, and troponin subfamilies. This study represents a genome, structure, and expression analysis of the S100 protein family, in mouse, human, and rat. We confirm the high level of conservation between mammalian sequences but sh...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2004.02.002

    authors: Ravasi T,Hsu K,Goyette J,Schroder K,Yang Z,Rahimi F,Miranda LP,Alewood PF,Hume DA,Geczy C

    更新日期:2004-07-01 00:00:00

  • Molecular cloning and characterization of NEU4, the fourth member of the human sialidase gene family.

    abstract::Several mammalian sialidases have been cloned so far and here we describe the identification and expression of a new member of the human sialidase gene family. The NEU4 gene, identified by searching sequence databases for entries showing homologies to the human cytosolic sialidase NEU2, maps in 2q37 and encodes a 484-...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2003.08.019

    authors: Monti E,Bassi MT,Bresciani R,Civini S,Croci GL,Papini N,Riboni M,Zanchetti G,Ballabio A,Preti A,Tettamanti G,Venerando B,Borsani G

    更新日期:2004-03-01 00:00:00

  • Mammalian homologues of the Drosophila Son of sevenless gene map to murine chromosomes 17 and 12 and to human chromosomes 2 and 14, respectively.

    abstract::Activating mutations in the ras genes are commonly found in a wide range of human tumors. We recently cloned two mammalian genes, Son of sevenless 1 (mSos1) and Son of sevenless 2 (mSos2), whose protein products appear to be important positive regulators of ras proteins. Given the proposed role of Sos proteins in ras ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1421

    authors: Webb GC,Jenkins NA,Largaespada DA,Copeland NG,Fernandez CS,Bowtell DD

    更新日期:1993-10-01 00:00:00

  • Construction and characterization of a bovine bacterial artificial chromosome library.

    abstract::A bacterial artificial chromosome (BAC) library has been constructed for use in bovine genome mapping using constructed for use in bovine genome mapping using the pBeloBAC11 vector. Currently, the library consists of 23,040 clones, which achieves a 70% probability (P=0.70) of the library containing a specific unique D...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.9986

    authors: Cai L,Taylor JF,Wing RA,Gallagher DS,Woo SS,Davis SK

    更新日期:1995-09-20 00:00:00

  • The gene for the human putative apoE receptor is on chromosome 12 in the segment q13-14.

    abstract::We have previously described the cDNA coding for a new lipoprotein receptor that contains domains closely related to the ligand-binding domain of the LDL receptor. We have now investigated the localization of the gene for this new receptor by hybridization of the cDNA to panels of rodent cells containing subsets of hu...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90087-6

    authors: Myklebost O,Arheden K,Rogne S,Geurts van Kessel A,Mandahl N,Herz J,Stanley K,Heim S,Mitelman F

    更新日期:1989-07-01 00:00:00

  • Linkage analysis with multiplexed short tandem repeat polymorphisms using infrared fluorescence and M13 tailed primers.

    abstract::The use of short tandem repeat polymorphisms (STRPs) as marker loci for linkage analysis is becoming increasingly important due to their large numbers in the human genome and their high degree of polymorphism. Fluorescence-based detection of the STRP pattern with an automated DNA sequencer has improved the efficiency ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1264

    authors: Oetting WS,Lee HK,Flanders DJ,Wiesner GL,Sellers TA,King RA

    更新日期:1995-12-10 00:00:00

  • Duplication of phospholipase C-delta gene family in fish genomes.

    abstract::Fishes possess more genes than other vertebrates, possibly because of a genome duplication event during the evolution of the teleost (ray-finned) fish lineage. To further explore this idea, we cloned five genes encoding phosphoinositide-specific phospholipase C-delta (PLC-delta), designated respectively PoPLC-deltas, ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2008.07.012

    authors: Kim MS,Seo JS,Ahn SJ,Kim NY,Je JE,Sung JH,Lee HH,Chung JK

    更新日期:2008-11-01 00:00:00

  • cDNA cloning and mapping of a novel islet-brain/JNK-interacting protein.

    abstract::IB1/JIP-1 is a scaffold protein that regulates the c-Jun NH(2)-terminal kinase (JNK) signaling pathway, which is activated by environmental stresses and/or by treatment with proinflammatory cytokines including IL-1beta and TNF-alpha. The JNKs play an essential role in many biological processes, including the maturatio...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6129

    authors: Negri S,Oberson A,Steinmann M,Sauser C,Nicod P,Waeber G,Schorderet DF,Bonny C

    更新日期:2000-03-15 00:00:00

  • Amplification of CFTR exon 9 sequences to multiple locations in the human genome.

    abstract::Cloning and characterization of the cystic fibrosis transmembrane conductance regulator (CFTR) gene led to the identification and isolation of cDNA and genomic sequences that cross-hybridized to the first nucleotide binding fold of CFTR. DNA sequence analysis of these clones showed that the cross-hybridizing sequences...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4968

    authors: Rozmahel R,Heng HH,Duncan AM,Shi XM,Rommens JM,Tsui LC

    更新日期:1997-11-01 00:00:00

  • Long uninterrupted CGG repeats within the first exon of the human FMR1 gene are not intrinsically unstable in transgenic mice.

    abstract::Despite the increasing number of disorders known to result from trinucleotide repeat amplification, the molecular mechanism underlying these dynamic mutations is still unknown. In an attempt to create a mouse model for the CGG repeat instability seen in Fragile X syndrome, we constructed transgenes corresponding to FM...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5299

    authors: Lavedan C,Grabczyk E,Usdin K,Nussbaum RL

    更新日期:1998-06-01 00:00:00

  • YY1-dependent transcriptional regulation of the human GDAP1 gene.

    abstract::Charcot-Marie-Tooth disease (CMT) is a heritable neurodegenerative condition, some types of which (notably CMT4A) are caused by mutations in the GDAP1 gene that encodes a protein of unknown molecular function implicated in regulation of mitochondrial fission. Here we present for the first time a functional analysis of...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2009.08.014

    authors: Ratajewski M,Pulaski L

    更新日期:2009-12-01 00:00:00

  • Chromosomal localization of seven members of the murine TGF-beta superfamily suggests close linkage to several morphogenetic mutant loci.

    abstract::Chromosomal locations have been assigned to seven members of the TGF-beta superfamily using an interspecific mouse backcross. Probes for the Tgfb-1, -2, and -3, Bmp-2a and -3, and Vgr-1 genes recognized only single loci, whereas the Bmp-2b probe recognized two independently segregating loci (designated Bmp-2b1 and Bmp...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90480-i

    authors: Dickinson ME,Kobrin MS,Silan CM,Kingsley DM,Justice MJ,Miller DA,Ceci JD,Lock LF,Lee A,Buchberg AM

    更新日期:1990-03-01 00:00:00

  • A novel endogenous retrovirus-related element in the human genome resembles a DNA transposon: evidence for an evolutionary link?

    abstract::A significant fraction of the human genome is composed of various types of transposable elements, which are divided into two broad classes based on their mehcanism of transposition: via an RNA intermediate (retroelements) or via a DNA intermediate (DNA transposons). The retroelements, which include endogenous retrovir...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:

    authors: Hughes JF,Coffin JM

    更新日期:2002-11-01 00:00:00

  • Characterization of the murine Icam-1 gene.

    abstract::Intercellular adhesion molecule-1 (ICAM-1, CD54) is a cell adhesion molecule that interacts with the leukocyte beta 2 integrins, LFA-1 and Mac-1. Murine inflammatory models are being utilized increasingly to define the role that ICAM-1 induction plays in the initiation of inflammation. We have isolated murine genomic ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80132-6

    authors: Ballantyne CM,Sligh JE Jr,Dai XY,Beaudet AL

    更新日期:1992-12-01 00:00:00

  • Cloning, structural organization, and chromosomal mapping of the human phenol sulfotransferase STP2 gene.

    abstract::Phenol- and monoamine-metabolizing sulfotransferases (STP and STM, respectively) are members of a superfamily of enzymes that add sulfate to a variety of xenobiotics and endobiotics containing hydroxyl or amino functional groups. To characterize related sulfotransferase genes further, we used extra-long PCR (XL-PCR) t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.4575

    authors: Gaedigk A,Beatty BG,Grant DM

    更新日期:1997-03-01 00:00:00

  • ArchaeaTF: an integrated database of putative transcription factors in Archaea.

    abstract::Identification of all the transcription factors (TFs) encoded in a given genome is a prerequisite for understanding transcriptional regulatory networks. Archaea are prokaryotes that constitute one of the three main branches of organisms with an astounding diversity of habitats. In this report, we establish the Archaea...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.09.007

    authors: Wu J,Wang S,Bai J,Shi L,Li D,Xu Z,Niu Y,Lu J,Bao Q

    更新日期:2008-01-01 00:00:00

  • Comparative transcriptome analysis of diploid and triploid hybrid groupers (Epinephelus coioides♀ × E. lanceolatus♂) reveals the mechanism of abnormal gonadal development in triploid hybrids.

    abstract::In our previous studies, diploid and triploid hybrids have been detected from the hybridization of Epinephelus coioides♀ × E. lanceolatus♂. The triploid groupers have been found to be delayed in gonadal development, but the mechanism remains poorly understood. In this study, we examined the gonadal development, assaye...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2018.11.010

    authors: Xiao L,Wang D,Guo Y,Tang Z,Liu Q,Li S,Zhang Y,Lin H

    更新日期:2019-05-01 00:00:00

  • Isolation and chromosomal mapping of the human homolog of perilipin (PLIN), a rat adipose tissue-specific gene, by differential display method.

    abstract::Using the differential display technique, we isolated a cDNA clone encoding the human homolog of rat perilipin, a unique protein associated with intracellular neutral lipid droplets in adipocytes and steroidogenic cells. The full cDNA contains an open reading frame of 1566 nucleotides encoding 522 amino acids and bear...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.5179

    authors: Nishiu J,Tanaka T,Nakamura Y

    更新日期:1998-03-01 00:00:00

  • cDNA and genomic cloning of human palmitoyl-protein thioesterase (PPT), the enzyme defective in infantile neuronal ceroid lipofuscinosis.

    abstract::Palmitoyl-protein thioesterase (PPT) is a small glycoprotein that removes palmitate groups from cysteine residues in lipid-modified proteins. We recently reported mutations in PPT in patients with infantile neuronal ceroid lipofuscinosis (INCL), a severe neurodegenerative disorder (J. Vesa et al., 1995, Nature 376: 58...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0292

    authors: Schriner JE,Yi W,Hofmann SL

    更新日期:1996-06-15 00:00:00

  • Plant-pathogen interactions: MicroRNA-mediated trans-kingdom gene regulation in fungi and their host plants.

    abstract::MicroRNAs (miRNAs) have been prevalently studied in plants, animals, and viruses. However, recent studies show evidences of miRNA-like RNAs (milRNAs) in fungi as well. It is known that after successful infection, pathogens hijack the host machinery and use it for their own growth and multiplication. Alternatively, res...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.05.021

    authors: Mathur M,Nair A,Kadoo N

    更新日期:2020-09-01 00:00:00

  • Tissue-specific expression of a BAC transgene targeted to the Hprt locus in mouse embryonic stem cells.

    abstract::The hypoxanthine phosphoribosyltransferase (Hprt) locus has been shown to have minimal influence on transgene expression when used as a surrogate site in the mouse genome. We have developed a method to transfer bacterial artificial chromosomes (BACs) as a single copy into the partially deleted Hprt locus of embryonic ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2003.12.015

    authors: Heaney JD,Rettew AN,Bronson SK

    更新日期:2004-06-01 00:00:00

  • Visual DNA -- identification of DNA sequence variations by bead trapping.

    abstract::In this paper we describe a method that uses the nearly covalent strength biotin-streptavidin interaction to attach a paramagnetic bead of micrometer size to a DNA molecule of nanometer size, scaling up the spatial size of a query DNA strand by a factor of 1000, making it visible to the human eye. The use of magnetic ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.07.014

    authors: Ståhl PL,Gantelius J,Natanaelsson C,Ahmadian A,Andersson-Svahn H,Lundeberg J

    更新日期:2007-12-01 00:00:00

  • Nucleotide variation, haplotype structure, and association with end-stage renal disease of the human interleukin-1 gene cluster.

    abstract::A dense gene-based SNP map was constructed across a 360-kb region containing the interleukin-1 gene cluster (IL1A, IL1B, and IL1RN), focusing on IL1RN. In total, 95 polymorphisms were confirmed or identified primarily by direct sequencing. Polymorphisms were precisely mapped to completed BAC and genomic sequences span...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(03)00123-x

    authors: Bensen JT,Langefeld CD,Hawkins GA,Green LE,Mychaleckyj JC,Brewer CS,Kiger DS,Binford SM,Colicigno CJ,Allred DC,Freedman BI,Bowden DW

    更新日期:2003-08-01 00:00:00

  • Structure of the mouse arylsulfatase A gene and cDNA.

    abstract::The murine arylsulfatase A (ARSA) gene and cDNA have been cloned and sequenced. The gene is 3.8 kb long and contains eight exons. All intron/exon splice junctions conform to the GT/AG consensus sequence. The genomic structure is similar to that of the human gene. One major RNA species of 3.2 kb is transcribed. This RN...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1055

    authors: Kreysing J,Polten A,Hess B,von Figura K,Menz K,Steiner F,Gieselmann V

    更新日期:1994-01-15 00:00:00

  • A physical and transcript map based upon refinement of the critical interval for PPH1, a gene for familial primary pulmonary hypertension. The International PPH Consortium.

    abstract::Primary pulmonary hypertension (PPH), an often fatal disorder, is characterized by sustained elevation of pulmonary artery pressure of unknown cause. In its familial form (FPPH), the disorder segregates as an autosomal dominant and displays markedly reduced penetrance. A gene for FPPH was previously localized to a 25-...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6291

    authors: Machado RD,Pauciulo MW,Fretwell N,Veal C,Thomson JR,Vilariño Güell C,Aldred M,Brannon CA,Trembath RC,Nichols WC

    更新日期:2000-09-01 00:00:00

  • Mapping of genes for the human C5a receptor (C5AR), human FMLP receptor (FPR), and two FMLP receptor homologue orphan receptors (FPRH1, FPRH2) to chromosome 19.

    abstract::The genes encoding receptors for the chemotactic ligands C5a (C5AR) and FMLP (FPR) were mapped using a panel of somatic cell hybrids to chromosome 19. Because the hybridization pattern on Southern analysis suggested an intron structure or related genes in the case of FPR, genomic clones were characterized. Two structu...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90265-t

    authors: Bao L,Gerard NP,Eddy RL Jr,Shows TB,Gerard C

    更新日期:1992-06-01 00:00:00

  • Human phenol sulfotransferase STP2 gene: molecular cloning, structural characterization, and chromosomal localization.

    abstract::Sulfonation is an important pathway in the biotransformation of many drugs, xenobiotics, neurotransmitters, and steroid hormones. The thermostable (TS) form of phenol sulfotransferase (PST) preferentially catalyzes the sulfonation of "simple" planar phenols, and levels of activity of TS PST in human tissues are contro...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0216

    authors: Her C,Raftogianis R,Weinshilboum RM

    更新日期:1996-05-01 00:00:00

  • MetaCAA: A clustering-aided methodology for efficient assembly of metagenomic datasets.

    abstract::A key challenge in analyzing metagenomics data pertains to assembly of sequenced DNA fragments (i.e. reads) originating from various microbes in a given environmental sample. Several existing methodologies can assemble reads originating from a single genome. However, these methodologies cannot be applied for efficient...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2014.02.007

    authors: Reddy RM,Mohammed MH,Mande SS

    更新日期:2014-02-01 00:00:00