Independent functions for the N- and C-termini in the overlap region of tropomyosin.

Abstract:

:Tropomyosin (TM) is a coiled-coil that binds head-to-tail along the helical actin filament. The ends of 284-residue tropomyosins are believed to overlap by about nine amino acids. The present study investigates the function of the N- and C-terminal overlap regions. Recombinant tropomyosins were produced in Escherichia coli in which nine amino acids were truncated from the N-terminal, C-terminal, or both ends of striated muscle alpha-tropomyosin (TM9a) and TM2 (TM9d), a nonmuscle alpha-tropomyosin expressed in many cells. The two isoforms are identical except for the C-terminal 27 amino acids encoded by exon 9a (striated) or exon 9d (TM2). Removal of either end greatly reduces the actin affinity of both tropomyosins in all conditions and the cooperativity with which myosin promotes tropomyosin binding to actin in the open state. N-Terminal truncations generally are more deleterious than C-terminal truncations. With TM9d, truncation of the N-terminus is as deleterious as both for myosin S1-induced binding. None of the TM9d variants binds well to actin with troponin (+/-Ca(2+)). TM9a with the truncated N-terminus binds more weakly to actin with troponin (-Ca(2+)) than when the C-terminus is removed but more strongly than when both ends are removed; the actin binding of all three forms is cooperative. The results show that the ends of TM9a, though important, are not required for cooperative function and suggest they have independent functions beyond formation of an overlap complex. The nonadditivity of the TM9d truncations suggests that the ends may primarily function as a complex in this isoform. A surprising result is that all variants bound with the same affinity, and noncooperatively, to actin saturated with myosin S1. Evidently, end-to-end interactions are not required for high-affinity binding to acto-myosin S1.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Moraczewska J,Hitchcock-DeGregori SE

doi

10.1021/bi000242b

subject

Has Abstract

pub_date

2000-06-13 00:00:00

pages

6891-7

issue

23

eissn

0006-2960

issn

1520-4995

pii

bi000242b

journal_volume

39

pub_type

杂志文章
  • Equilibrium and stop-flow kinetic studies of fluorescently labeled DNA substrates with DNA repair proteins XPA and replication protein A.

    abstract::Nucleotide excision repair (NER) is a crucial pathway in the maintenance of genome stability requiring at least two dozen proteins. XPA and RPA have essential roles in the damage recognition step of NER. To better understand the mechanism of their interactions with DNA, we utilized equilibrium and stop-flow kinetic ap...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011041q

    authors: Iakoucheva LM,Walker RK,van Houten B,Ackerman EJ

    更新日期:2002-01-08 00:00:00

  • Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.

    abstract::Heme-derived linear tetrapyrroles (phytobilins) in phycobiliproteins and phytochromes perform critical light-harvesting and light-sensing roles in oxygenic photosynthetic organisms. A key enzyme in their biogenesis, phycocyanobilin:ferredoxin oxidoreductase (PcyA), catalyzes the overall four-electron reduction of bili...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi100728q

    authors: Kohler AC,Gae DD,Richley MA,Stoll S,Gunn A,Lim S,Martin SS,Doukov TI,Britt RD,Ames JB,Lagarias JC,Fisher AJ

    更新日期:2010-07-27 00:00:00

  • Purification and partial characterization of rat liver folate binding protein: cytosol I.

    abstract::The high molecular weight folate binding protein of rat liver cytosol has been purified to apparent homogeneity. Purification was achieved by using a combination of gel filtration, O-(diethylaminoethyl)cellulose chromatography, and affinity chromatography. This folate binding protein was initially identified during pu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00261a036

    authors: Cook RJ,Wagner C

    更新日期:1982-08-31 00:00:00

  • The carboxy terminus of sodium and potassium ion transporting ATPase is located on the cytoplasmic surface of the membrane.

    abstract::The positions, with respect to the plasma membrane, of lysine 905, contained in the peptide QRKIVE, and of lysine 1012, contained in the carboxy-terminal peptide, RPGGWVEKETYY, of ovine Na+/K(+)-transporting ATPase have been reported to be cytoplasmic and extracytoplasmic, respectively [Bayer, R. (1990) Biochemistry 2...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00062a012

    authors: Thibault D

    更新日期:1993-03-23 00:00:00

  • Integrin-supported fast rate intracellular delivery of plasmid DNA by extracellular matrix protein embedded calcium phosphate complexes.

    abstract::Extracellular matrix (ECM) proteins, such as collagen and fibronectin, play vital roles in development and maintenance of hard tissue (bone or tooth) and are, consequently, thoroughly investigated for construction of biomimetic scaffolds in combination with calcium phosphate (CaP) material (the major component of hard...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi050595g

    authors: Chowdhury EH,Nagaoka M,Ogiwara K,Zohra FT,Kutsuzawa K,Tada S,Kitamura C,Akaike T

    更新日期:2005-09-20 00:00:00

  • Structures of gangliosides from bovine adrenal medulla.

    abstract::Five gangliosides, accounting for over 95% of the total ganglioside fraction, were isolated from bovine adrenal medulla by preparative thin-layer chromatography and the carbohydrate structures determined by a combination of periodate oxidation and permethylation techniques. Partially methylated alditol acetates were g...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00678a026

    authors: Price H,Kundu S,Ledeen R

    更新日期:1975-04-08 00:00:00

  • Characterization of mouse ZP3-derived glycopeptide, gp55, that exhibits sperm receptor and acrosome reaction-inducing activity in vitro.

    abstract::During fertilization, free-swimming mouse sperm bind to mZP3 (approximately 83 000 Mr), one of three zona pellucida glycoproteins, and once bound undergo the acrosome reaction, a type of cellular exocytosis [Wassarman, P. M., & Litscher, E. S. (1995) Curr. Top. Dev. Biol. 30, 1-19]. Sperm recognize and bind to specifi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952722m

    authors: Litscher ES,Wassarman PM

    更新日期:1996-04-02 00:00:00

  • Induction by torsional stress of an altered DNA conformation 5' upstream of the gene for a high mobility group protein from trout and specific binding to flanking sequences by the gene product HMG-T.

    abstract::We have used enzymic and chemical probes to search for altered DNA conformations in the 5' flanking region of the gene for a high mobility group protein (HMG-T) from trout. This search was conducted in order to identify potential genetic elements that might be involved in the transcriptional control of the HMG-T gene....

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00402a012

    authors: Wright JM,Dixon GH

    更新日期:1988-01-26 00:00:00

  • Solution structure of GxTX-1E, a high-affinity tarantula toxin interacting with voltage sensors in Kv2.1 potassium channels .

    abstract::GxTX-1E is a neurotoxin recently isolated from Plesiophrictus guangxiensis venom that inhibits the Kv2.1 channel in pancreatic beta-cells. The sequence of the toxin is related to those of previously studied tarantula toxins that interact with the voltage sensors in Kv channels, and GxTX-1E interacts with the Kv2.1 cha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi100246u

    authors: Lee S,Milescu M,Jung HH,Lee JY,Bae CH,Lee CW,Kim HH,Swartz KJ,Kim JI

    更新日期:2010-06-29 00:00:00

  • GTP hydrolysis of cell division protein FtsZ: evidence that the active site is formed by the association of monomers.

    abstract::The essential prokaryotic cell division protein FtsZ is a tubulin homologue that forms a ring at the division site. FtsZ forms polymers in a GTP-dependent manner. Recent biochemical evidence has shown that FtsZ forms multimeric structures in vitro and in vivo and functions as a self-activating GTPase. Structural analy...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011370i

    authors: Scheffers DJ,de Wit JG,den Blaauwen T,Driessen AJ

    更新日期:2002-01-15 00:00:00

  • Association of melittin with the isolated myosin light chains.

    abstract::Melittin is a 26-residue peptide which undergoes high-affinity calcium-dependent binding by calmodulin [Barnette, M.S., Daly, R., & Weiss, B. (1983) Biochem. Pharmacol. 32, 2929; Comte, M., Maulet, Y., & Cox, J.A. (1983) Biochem. J. 209, 269; Anderson, S.R., & Malencik, D.A. (1986) Calcium Cell Funct. 6, 1]. The resul...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00406a021

    authors: Malencik DA,Anderson SR

    更新日期:1988-03-22 00:00:00

  • Heat shock protein 80 of Neurospora crassa, a cytosolic molecular chaperone of the eukaryotic stress 90 family, interacts directly with heat shock protein 70.

    abstract::The subunit structure of Hsp80, the most abundant heat-shock protein of Neurospora crassa, was examined by chemical cross-linking of the purified protein in vitro. Resolution of glutaraldehyde-treated Hsp80 by sodium dodecyl sulfate-polyacrylamide gel electrophoresis SDS-PAGE suggests that the native state of this pro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi963030g

    authors: Freitag DG,Ouimet PM,Girvitz TL,Kapoor M

    更新日期:1997-08-19 00:00:00

  • Influence of phosphoenolpyruvate and magnesium ions on the quaternary structure of enzyme I of the phosphotransferase system from gram-positive bacteria.

    abstract::Solution X-ray scattering patterns of enzyme I of the phosphotransferase system from Staphylococcus carnosus indicate an increase in radius of gyration and molecular mass in the presence of Mg2+ or both Mg2+ and phosphoenolpyruvate, indicating a partial dimerization of enzyme I. Mg2+ ions are essential for both the di...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00048a014

    authors: Hübner G,König S,Koch MH,Hengstenberg W

    更新日期:1995-12-05 00:00:00

  • Estimation of the distance change between cysteine-457 and the nucleotide binding site when sodium pump changes conformation from E1 to E2 by fluorescence energy transfer measurements.

    abstract::The first indication of the size of a conformational change implicated in ion transport by sodium pump has been obtained by measuring the change in efficiency of fluorescence energy transfer between two specific locations on the alpha-subunit. The donor (5'-(iodoacetamido)fluorescein) attaches covalently to cysteine-4...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960407+

    authors: Lin SH,Faller LD

    更新日期:1996-06-25 00:00:00

  • A mechanistic investigation of the C-terminal redox motif of thioredoxin reductase from Plasmodium falciparum.

    abstract::High-molecular mass thioredoxin reductases (TRs) are pyridine nucleotide disulfide oxidoreductases that catalyze the reduction of the disulfide bond of thioredoxin (Trx). Trx is responsible for reducing multiple protein disulfide targets in the cell. TRs utilize reduced β-nicotinamide adenine dinucleotide phosphate to...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi400931k

    authors: Snider GW,Dustin CM,Ruggles EL,Hondal RJ

    更新日期:2014-01-28 00:00:00

  • Isolation of a malonyl-CoA-sensitive CPT/beta-oxidation enzyme complex from heart mitochondria.

    abstract::The goal of this study was to establish conditions for solubilization and characterization of CPTo, the malonyl-CoA sensitive form of mitochondrial carnitine palmitoyltransferase. CPTo of heart mitochondria is soluble in 1% octyl glucoside with retention of malonyl-CoA sensitivity. The degree of malonyl-CoA sensitivit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00470a010

    authors: Kerner J,Bieber L

    更新日期:1990-05-08 00:00:00

  • Structural analysis of integrin recognition and the inhibition of integrin-mediated cell functions by novel nonpeptidic surrogates of the Arg-Gly-Asp sequence.

    abstract::The pivotal role of the Arg-Gly-Asp (RGD) peptide motif in integrin-mediated cell adhesive interactions with extracellular matrix and plasma proteins stimulated the present design of nonpeptidic mimetics of this sequence. To probe the structural requirements for RGD recognition by integrins, we designed various struct...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00055a002

    authors: Greenspoon N,Hershkoviz R,Alon R,Varon D,Shenkman B,Marx G,Federman S,Kapustina G,Lider O

    更新日期:1993-02-02 00:00:00

  • Interaction of alamethicin with lecithin bilayers: a 31P and 2H NMR study.

    abstract::The interaction of alamethicin with artificial lecithin multilamellar dispersions was investigated by nuclear magnetic resonance (NMR) and Raman spectroscopies. 31P NMR studies revealed perturbation of the lipid head groups in the presence of the icosapeptide. Simulation of the 31P NMR spectra indicated that the obser...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00347a019

    authors: Banerjee U,Zidovetzki R,Birge RR,Chan SI

    更新日期:1985-12-17 00:00:00

  • Electron spin echo modulation and nuclear relaxation studies of staphylococcal nuclease and its metal-coordinating mutants.

    abstract::Electron spin echo envelope modulation (ESEEM) spectroscopy has been applied to the determination of the number of water molecules coordinated to the metal in the binary complex of staphylococcal nuclease with Mn2+, to the ternary enzyme-Mn2+-3',5'-pdTp complex, and to ternary complexes of a number of mutant enzymes i...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00421a010

    authors: Serpersu EH,McCracken J,Peisach J,Mildvan AS

    更新日期:1988-10-18 00:00:00

  • Coordinating role of His216 in MgATP binding and cleavage in pyruvate carboxylase.

    abstract::His216 is a well-conserved residue in pyruvate carboxylases and, on the basis of structures of the enzyme, appears to have a role in the binding of MgATP, forming an interaction with the 3'-hydroxyl group of the ribose ring. Mutation of this residue to asparagine results in a 9-fold increase in the Km for MgATP in its...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi4016814

    authors: Adina-Zada A,Jitrapakdee S,Wallace JC,Attwood PV

    更新日期:2014-02-18 00:00:00

  • PRL1 promotes cell migration and invasion by increasing MMP2 and MMP9 expression through Src and ERK1/2 pathways.

    abstract::The PRL (phosphatase of regenerating liver) phosphatases represent a distinct class of protein tyrosine phosphatases, which are implicated in tumorigenesis and metastasis processes. Accumulating evidence indicates that alteration of PRL1 expression affects cell motility and tumor metastasis, although the biochemical p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8020789

    authors: Luo Y,Liang F,Zhang ZY

    更新日期:2009-03-03 00:00:00

  • Generation of autonomous activity of Ca(2+)/calmodulin-dependent protein kinase kinase β by autophosphorylation.

    abstract::Ca(2+)/calmodulin-dependent protein kinase kinases (CaMKKs) phosphorylate and activate specific downstream protein kinases, including CaMKI, CaMKIV, and 5'-AMP-activated protein kinase, which mediates a variety of Ca(2+) signaling cascades. CaMKKs have been shown to undergo autophosphorylation, although their role in ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi201005g

    authors: Tokumitsu H,Hatano N,Fujimoto T,Yurimoto S,Kobayashi R

    更新日期:2011-09-27 00:00:00

  • Adenine protonation in domain B of the hairpin ribozyme.

    abstract::Protein enzymes often use ionizable side chains, such as histidine, for general acid-base catalysis because the imidazole pK(a) is near neutral pH. RNA enzymes, on the other hand, are comprised of nucleotides which do not have apparent pK(a) values near neutral pH. Nevertheless, it has been recently shown that cytidin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001976r

    authors: Ravindranathan S,Butcher SE,Feigon J

    更新日期:2000-12-26 00:00:00

  • Helix packing in subunit a of the Escherichia coli ATP synthase as determined by chemical labeling and proteolysis of the cysteine-substituted protein.

    abstract::Subunit a of the Escherichia coli ATP synthase is thought to control access of protons to the ring of c subunits during proton-driven ATP synthesis. In this study, the surface exposure of subunit a in the periplasm has been examined using 3-N-maleimidyl-propionyl biocytin labeling in cells permeabilized by polymyxin B...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi026649t

    authors: Zhang D,Vik SB

    更新日期:2003-01-21 00:00:00

  • Structures of the Klebsiella aerogenes urease apoenzyme and two active-site mutants.

    abstract::Urease from Klebsiella aerogenes [Jabri et al. (1995) Science 268, 998-1004] is an (alpha beta gamma)3 trimer with each alpha-subunit having an (alpha beta)8-barrel domain containing a binickel active center. Here we examine structure-function relations for urease in more detail through structural analysis of the urea...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960424z

    authors: Jabri E,Karplus PA

    更新日期:1996-08-20 00:00:00

  • Structural insights into the prereaction state of pyruvate decarboxylase from Zymomonas mobilis .

    abstract::Pyruvate decarboxylase (PDC) uses thiamine diphosphate as an essential cofactor to catalyze the formation of acetaldehyde on the pathway of ethanol synthesis. Here we report the crystallographic image of a prereaction intermediate of a bacterial pyruvate decarboxylase prepared by cocrystallizing the enzyme with pyruva...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901864j

    authors: Pei XY,Erixon KM,Luisi BF,Leeper FJ

    更新日期:2010-03-02 00:00:00

  • Structure of Toxoplasma gondii LDH1: active-site differences from human lactate dehydrogenases and the structural basis for efficient APAD+ use.

    abstract::While within a human host the opportunistic pathogen Toxoplasma gondii relies heavily on glycolysis for its energy needs. Lactate dehydrogenase (LDH), the terminal enzyme in anaerobic glycolysis necessary for NAD(+) regeneration, therefore represents an attractive therapeutic target. The tachyzoite stage lactate dehyd...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035108g

    authors: Kavanagh KL,Elling RA,Wilson DK

    更新日期:2004-02-03 00:00:00

  • Proteolytic activity of alpha 2-macroglobulin-enzyme complexes toward human factor VIII/von Willebrand factor.

    abstract::The low level of enzymatic activity of certain alpha 2-macroglobulin-proteinase complexes could be important to the function of factor VIII/von Willebrand glycoprotein since it is especially sensitive to proteolytic cleavage. To test this possibility, complexes of alpha 2-macroglobulin with plasmin, trypsin, and throm...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00275a018

    authors: Switzer ME,Gordon HJ,McKee PA

    更新日期:1983-03-15 00:00:00

  • Jeltraxin, a frog egg jelly glycoprotein, has calcium-dependent lectin properties and is related to human serum pentraxins CRP and SAP.

    abstract::The egg jelly that encapsulates amphibian eggs is essential for fertilization, but its molecular composition and roles remain largely unknown. We identified a calcium-dependent lectin from the pentraxin superfamily in the egg jelly coat from the South American burrowing frog, Lepidobatrachus laevis. This lectin, jeltr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035314o

    authors: Peavy TR,Hernandez C,Carroll EJ Jr

    更新日期:2003-11-11 00:00:00

  • von Willebrand factor antagonizes nitric oxide synthase to promote insulin resistance during hypoxia.

    abstract::Hypoxic respiratory diseases or hypoxia exposures are frequently accompanied by glucose intolerance and impaired nitric oxide (NO) availability. However, the molecular mechanism responsible for impaired NO production and insulin resistance (IR) during hypoxia remains obscure. In this study, we investigated the possibl...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi401061e

    authors: Singh B,Biswas I,Garg I,Sugadev R,Singh AK,Dey S,Khan GA

    更新日期:2014-01-14 00:00:00