Identifiability of structural networks of nonlinear electronic oscillators.

Abstract:

:The interplay between structure and function is critical in the understanding of complex systems, their dynamics and their behavior. We investigated the interplay between structural and functional networks by means of the differential identifiability framework, which here quantifies the ability of identifying a particular network structure based on (1) the observation of its functional network and (2) the comparison with a prior observation under different initial conditions. We carried out an experiment consisting of the construction of [Formula: see text] different structural networks composed of [Formula: see text] nonlinear electronic circuits and studied the regions where network structures are identifiable. Specifically, we analyzed how differential identifiability is related to the coupling strength between dynamical units (modifying the level of synchronization) and what are the consequences of increasing the amount of noise existing in the functional networks. We observed that differential identifiability reaches its highest value for low to intermediate coupling strengths. Furthermore, it is possible to increase the identifiability parameter by including a principal component analysis in the comparison of functional networks, being especially beneficial for scenarios where noise reaches intermediate levels. Finally, we showed that the regime of the parameter space where differential identifiability is the highest is highly overlapped with the region where structural and functional networks correlate the most.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Vera-Ávila VP,Sevilla-Escoboza R,Goñi J,Rivera-Durón RR,Buldú JM

doi

10.1038/s41598-020-71373-4

subject

Has Abstract

pub_date

2020-09-04 00:00:00

pages

14668

issue

1

issn

2045-2322

pii

10.1038/s41598-020-71373-4

journal_volume

10

pub_type

杂志文章
  • HIV Subtypes B and C gp120 and Methamphetamine Interaction: Dopaminergic System Implicates Differential Neuronal Toxicity.

    abstract::HIV subtypes or clades differentially induce HIV-associated neurocognitive disorders (HAND) and substance abuse is known to accelerate HIV disease progression. The HIV-1 envelope protein gp120 plays a major role in binding and budding in the central nervous system (CNS) and impacts dopaminergic functions. However, the...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11130

    authors: Samikkannu T,Rao KVK,Salam AAA,Atluri VSR,Kaftanovskaya EM,Agudelo M,Perez S,Yoo C,Raymond AD,Ding H,Nair MPN

    更新日期:2015-06-09 00:00:00

  • Author Correction: Novel Indole-fused benzo-oxazepines (IFBOs) inhibit invasion of hepatocellular carcinoma by targeting IL-6 mediated JAK2/STAT3 oncogenic signals.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-59134-9

    authors: Singh AK,Bhadauria AS,Kumar U,Raj V,Rai A,Kumar P,Keshari AK,Kumar D,Maity B,Nath S,Prakash A,Saha S

    更新日期:2020-02-06 00:00:00

  • Multiplex quantification of four DNA targets in one reaction with Bio-Rad droplet digital PCR system for GMO detection.

    abstract::The advantages of the digital PCR technology are already well documented until now. One way to achieve better cost efficiency of the technique is to use it in a multiplexing strategy. Droplet digital PCR platforms, which include two fluorescence filters, support at least duplex reactions and with some developments and...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep35451

    authors: Dobnik D,Štebih D,Blejec A,Morisset D,Žel J

    更新日期:2016-10-14 00:00:00

  • The depleted mineralization of the fungicide chlorothalonil derived from loss in soil microbial diversity.

    abstract::There are lack of studies regarding the effects of microbial diversity on specific soil functions, such as pesticides degradation. This study evaluated the role of bacterial community diversity and biochar on chlorothalonil (CTN) degradation, using 'dilution to extinction' approach, PCR-DGGE/16S rRNA gene technique, a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14803-0

    authors: de Souza AJ,de Andrade PAM,de Araújo Pereira AP,Andreote FD,Tornisielo VL,Regitano JB

    更新日期:2017-11-07 00:00:00

  • An ultraviolet responsive hybrid solar cell based on titania/poly(3-hexylthiophene).

    abstract::Here we present an ultraviolet responsive inorganic-organic hybrid solar cell based on titania/poly(3-hexylthiophene) (TiO(2)/P3HT) heterojuction. In this solar cell, TiO(2) is an ultraviolet light absorber and electronic conductor, P3HT is a hole conductor, the light-to-electrical conversion is realized by the cooper...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep01283

    authors: Wu J,Yue G,Xiao Y,Lin J,Huang M,Lan Z,Tang Q,Huang Y,Fan L,Yin S,Sato T

    更新日期:2013-01-01 00:00:00

  • Assessing effects from four years of industry-led badger culling in England on the incidence of bovine tuberculosis in cattle, 2013-2017.

    abstract::The objective was to measure the association between badger culling and bovine tuberculosis (TB) incidents in cattle herds in three areas of England between 2013-2017 (Gloucestershire and Somerset) and 2015-2017 (Dorset). Farming industry-selected licensed culling areas were matched to comparison areas. A TB incident ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49957-6

    authors: Downs SH,Prosser A,Ashton A,Ashfield S,Brunton LA,Brouwer A,Upton P,Robertson A,Donnelly CA,Parry JE

    更新日期:2019-10-11 00:00:00

  • Thermostatic properties of nitrate molten salts and their solar and eutectic mixtures.

    abstract::Nitrate molten salts are extensively used for sensible heat storage in Concentrated Solar Power (CSP) plants and thermal energy storage (TES) systems. They are the most promising materials for latent heat storage applications. By combining classical molecular dynamics and differential scanning calorimetry experiments,...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-28641-1

    authors: D'Aguanno B,Karthik M,Grace AN,Floris A

    更新日期:2018-07-11 00:00:00

  • Glucokinase intrinsically regulates glucose sensing and glucagon secretion in pancreatic alpha cells.

    abstract::The secretion of glucagon by pancreatic alpha cells is regulated by a number of external and intrinsic factors. While the electrophysiological processes linking a lowering of glucose concentrations to an increased glucagon release are well characterized, the evidence for the identity and function of the glucose sensor...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-76863-z

    authors: Moede T,Leibiger B,Vaca Sanchez P,Daré E,Köhler M,Muhandiramlage TP,Leibiger IB,Berggren PO

    更新日期:2020-11-19 00:00:00

  • Author Correction: Dogs and humans respond to emotionally competent stimuli by producing different facial actions.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-018-28651-z

    authors: Caeiro C,Guo K,Mills D

    更新日期:2018-07-05 00:00:00

  • Active Terahertz Chiral Metamaterials Based on Phase Transition of Vanadium Dioxide (VO2).

    abstract::Compared with natural materials, chiral metamaterials have been demonstrated with orders of magnitude stronger chiroptical response, which provides the basis for applications such as ultracompact polarization components and plasmonic-enhanced biosensing. Terahertz chiral metamaterials that allow dynamic polarization c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18472-x

    authors: Wang S,Kang L,Werner DH

    更新日期:2018-01-09 00:00:00

  • Peptide Functionalized Gold Nanorods for the Sensitive Detection of a Cardiac Biomarker Using Plasmonic Paper Devices.

    abstract::The sensitivity of localized surface plasmon resonance (LSPR) of metal nanostructures to adsorbates lends itself to a powerful class of label-free biosensors. Optical properties of plasmonic nanostructures are dependent on the geometrical features and the local dielectric environment. The exponential decay of the sens...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16206

    authors: Tadepalli S,Kuang Z,Jiang Q,Liu KK,Fisher MA,Morrissey JJ,Kharasch ED,Slocik JM,Naik RR,Singamaneni S

    更新日期:2015-11-10 00:00:00

  • Differential relationships of PTSD symptom clusters with cortical thickness and grey matter volumes among women with PTSD.

    abstract::Structural neuroimaging studies of posttraumatic stress disorder (PTSD) have typically reported reduced cortical thickness (CT) and gray matter volume (GMV) in subcortical structures and networks involved in memory retrieval, emotional processing and regulation, and fear acquisition and extinction. Although PTSD is mo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80776-2

    authors: Crombie KM,Ross MC,Letkiewicz AM,Sartin-Tarm A,Cisler JM

    更新日期:2021-01-19 00:00:00

  • Mechanical perturbations trigger endothelial nitric oxide synthase activity in human red blood cells.

    abstract::Nitric oxide (NO), a vascular signaling molecule, is primarily produced by endothelial NO synthase. Recently, a functional endothelial NO synthase (eNOS) was described in red blood cells (RBC). The RBC-eNOS contributes to the intravascular NO pool and regulates physiological functions. However the regulatory mechanism...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26935

    authors: Nagarajan S,Raj RK,Saravanakumar V,Balaguru UM,Behera J,Rajendran VK,Shathya Y,Ali BM,Sumantran V,Chatterjee S

    更新日期:2016-06-27 00:00:00

  • Endogenous emotion generation ability is associated with the capacity to form multimodal internal representations.

    abstract::Training the capacity to self-generate emotions can be a potent "vaccine" against negative stressors and be an effective intervention for affective psychopathology. However, due to a lack of knowledge about sources of individual differences in generation abilities, it is unclear how to optimally design such interventi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-20380-7

    authors: Engen H,Kanske P,Singer T

    更新日期:2018-01-31 00:00:00

  • Real-time in-situ distributed fiber core temperature measurement in hundred-watt fiber laser oscillator pumped by 915/976 nm LD sources.

    abstract::In this manuscript, we studied the thermal properties of hundred-watt fiber laser oscillator by real-time in-situ distributed temperature measurement. Optical frequency domain reflectometry (OFDR) was introduced to measure the temperature distribution of gain fiber core. The fiber laser oscillator operated at 1080 nm ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66470-3

    authors: Lou Z,Yang B,Han K,Wang X,Zhang H,Xi X,Liu Z

    更新日期:2020-06-02 00:00:00

  • Deconvoluting the Photonic and Electronic Response of 2D Materials: The Case of MoS2.

    abstract::Evaluating and tuning the properties of two-dimensional (2D) materials is a major focus of advancing 2D science and technology. While many claim that the photonic properties of a 2D layer provide evidence that the material is "high quality", this may not be true for electronic performance. In this work, we deconvolute...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-16970-6

    authors: Zhang K,Borys NJ,Bersch BM,Bhimanapati GR,Xu K,Wang B,Wang K,Labella M,Williams TA,Haque MA,Barnard ES,Fullerton-Shirey S,Schuck PJ,Robinson JA

    更新日期:2017-12-05 00:00:00

  • Odour-induced analgesia mediated by hypothalamic orexin neurons in mice.

    abstract::Various folk remedies employ certain odorous compounds with analgesic effects. In fact, linalool, a monoterpene alcohol found in lavender extracts, has been found to attenuate pain responses via subcutaneous, intraperitoneal, intrathecal, and oral administration. However, the analgesic effects of odorous compounds med...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep37129

    authors: Tashiro S,Yamaguchi R,Ishikawa S,Sakurai T,Kajiya K,Kanmura Y,Kuwaki T,Kashiwadani H

    更新日期:2016-11-15 00:00:00

  • ETS Related Gene mediated Androgen Receptor Aggregation and Endoplasmic Reticulum Stress in Prostate Cancer Development.

    abstract::Mechanistic studies of deregulated ERG in prostate cancer and other cancers continue to enhance its role in cancer biology and its utility as a biomarker and therapeutic target. Here, we show that ERG, through its physical interaction with androgen receptor, induces AR aggregation and endoplasmic reticulum stress in t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-01187-4

    authors: Sreenath TL,Macalindong SS,Mikhalkevich N,Sharad S,Mohamed A,Young D,Borbiev T,Xavier C,Gupta R,Jamal M,Babcock K,Tan SH,Nevalainen MT,Dobi A,Petrovics G,Sesterhenn IA,Rosner IL,Bieberich CJ,Nelson P,Vasioukhin V,

    更新日期:2017-04-24 00:00:00

  • Cross-talk between airway and gut microbiome links to IgE responses to house dust mites in childhood airway allergies.

    abstract::A connection between airway and gut microbiota related to allergen exposure in childhood allergies was not well addressed. We aimed to identify the microbiota alterations in the airway and gut related to mite-specific IgE responses in young children with airway allergies. This study enrolled 60 children, including 38 ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-70528-7

    authors: Chiu CY,Chan YL,Tsai MH,Wang CJ,Chiang MH,Chiu CC,Su SC

    更新日期:2020-08-10 00:00:00

  • Dilute-As AlNAs Alloy for Deep-Ultraviolet Emitter.

    abstract::The band structures of dilute-As AlNAs alloys with As composition ranging from 0% up to 12.5% are studied by using First-Principle Density Functional Theory (DFT) calculation. The energy band gap shows remarkable reduction from 6.19 eV to 3.87 eV with small amount of As content in the AlNAs alloy, which covers the dee...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep22215

    authors: Tan CK,Borovac D,Sun W,Tansu N

    更新日期:2016-02-24 00:00:00

  • Coronin7 regulates WASP and SCAR through CRIB mediated interaction with Rac proteins.

    abstract::Coronin7 (CRN7) stabilizes F-actin and is a regulator of processes associated with the actin cytoskeleton. Its loss leads to defects in phagocytosis, motility and development. It harbors a CRIB (Cdc42- and Rac-interactive binding) domain in each of its WD repeat domains which bind to Rac GTPases preferably in their GD...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep14437

    authors: Swaminathan K,Stumpf M,Müller R,Horn AC,Schmidbauer J,Eichinger L,Müller-Taubenberger A,Faix J,Noegel AA

    更新日期:2015-09-28 00:00:00

  • Modulation of TRPV-1 by prostaglandin-E2 and bradykinin changes cough sensitivity and autonomic regulation of cardiac rhythm in healthy subjects.

    abstract::A neurogenic pathway, involving airway TRPV-1, has been implicated in acute cardiovascular events occurring after peaks of air pollution. We tested whether inhaled prostaglandin-E2 (PGE2) and bradykinin (BK) regulate TRPV-1 activity in vivo by changing cough response to capsaicin (CPS) and affecting heart rate variabi...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-020-72062-y

    authors: Liviero F,Scarpa MC,De Stefani D,Folino F,Campisi M,Mason P,Iliceto S,Pavanello S,Maestrelli P

    更新日期:2020-09-16 00:00:00

  • Global Trends and Regional Variations in Studies of HIV/AIDS.

    abstract::We conduct textual analysis of a sample of more than 200,000 papers written on HIV/AIDS during the past three decades. Using the Latent Dirichlet Allocation method, we disentangle studies that address behavioral and social aspects from other studies and measure the trends of different topics as related to HIV/AIDS. We...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-04527-6

    authors: Baghaei Lakeh A,Ghaffarzadegan N

    更新日期:2017-06-23 00:00:00

  • Genomic Characterization of Diverse Gyroviruses Identified in the Feces of Domestic Cats.

    abstract::Gyroviruses (GyVs) are small, single-stranded, circular DNA viruses in the genus Gyrovirus, which consists of the chicken anemia virus (CAV) prototype and nine other viral species. These different GyV species have been reported in chickens, humans, mice, and companion animals. To date, CAV has been identified in the f...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49955-8

    authors: Niu JT,Yi SS,Dong GY,Guo YB,Zhao YL,Huang HL,Wang K,Hu GX,Dong H

    更新日期:2019-09-16 00:00:00

  • The substrate matters in the Raman spectroscopy analysis of cells.

    abstract::Raman spectroscopy is a powerful analytical method that allows deposited and/or immobilized cells to be evaluated without complex sample preparation or labeling. However, a main limitation of Raman spectroscopy in cell analysis is the extremely weak Raman intensity that results in low signal to noise ratios. Therefore...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13150

    authors: Mikoliunaite L,Rodriguez RD,Sheremet E,Kolchuzhin V,Mehner J,Ramanavicius A,Zahn DR

    更新日期:2015-08-27 00:00:00

  • HIDEEP: a systems approach to predict hormone impacts on drug efficacy based on effect paths.

    abstract::Experimental evidence has shown that some of the human endogenous hormones significantly affect drug efficacy. Since hormone status varies with individual physiological states, it is essential to understand the interplay of hormones and drugs for precision medicine. Here, we developed an in silico method to predict in...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-16855-8

    authors: Kwon M,Jung J,Yu H,Lee D

    更新日期:2017-11-30 00:00:00

  • An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of mass.

    abstract::Proteins are highly dynamic entities attaining a myriad of different conformations. Protein side chains change their states during dynamics, causing clashes that are propagated at distal sites. A convenient formalism to analyze protein dynamics is based on network theory using Protein Structure Networks (PSNs). Despit...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-01498-6

    authors: Salamanca Viloria J,Allega MF,Lambrughi M,Papaleo E

    更新日期:2017-06-06 00:00:00

  • Viewing Majorana Bound States by Rabi Oscillations.

    abstract::We propose to use Rabi oscillation as a probe to view the fractional Josepshon relation (FJR) associated with Majorana bound states (MBSs) expected in one-dimensional topological superconductors. The system consists of a quantum dot (QD) and an rf-SQUID with MBSs at the Josephson junction. Rabi oscillations between en...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11686

    authors: Wang Z,Liang QF,Yao DX,Hu X

    更新日期:2015-07-08 00:00:00

  • A CRISPR-based method for testing the essentiality of a gene.

    abstract::The CRISPR/Cas9 system is a powerful method of editing genes by randomly introducing errors into the target sites. Here, we describe a CRISPR-based test for gene essentiality (CRISPR-E test) that allows the identification of essential genes. Specifically, we use sgRNA-mediated CRISPR/Cas9 to target the open reading fr...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-71690-8

    authors: You Y,Ramachandra SG,Jin T

    更新日期:2020-09-08 00:00:00

  • Hop flower extracts mitigate retinal ganglion cell degeneration in a glaucoma mouse model.

    abstract::In glaucoma, retinal ganglion cells degenerate progressively, leading to visual field loss and blindness. Presently, the only treatment strategy for glaucoma is lowering the intraocular pressure. However, there are cases in which patients develop progressive visual field loss even though their intraocular pressures ar...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-78731-2

    authors: Hasegawa T,Ikeda HO,Iwai S,Sasaoka N,Kakizuka A,Tsujikawa A

    更新日期:2020-12-10 00:00:00