当前位置： SCI文献检索 > Genes期刊下所有文献 > Analyses of Hybrid Viability across a Hybrid Zone between Two Alnus Species Using Microsatellites and cpDNA Markers.

Analyses of Hybrid Viability across a Hybrid Zone between Two Alnus Species Using Microsatellites and cpDNA Markers.

Abstract：

:Diploid Alnus glutinosa s. str. and autotetraploid A. rohlenae form a narrow hybrid zone in a study area in southern Serbia, which results in triploid hybrid formation. The vast majority of previous studies have been focused on studies of maternal plants, but the offspring resulting from their crossing have not been much studied. Here, we use the variability of microsatellites and chloroplast DNA between these species and their putative hybrids to create an overall picture of the development of the hybrid zone and its predicted type. To elucidate the gene transfer within both species, the origins of individual ploidies and especially the role of triploid hybrids, a germination experiment was carried out linked with a flow cytometry study of the resulting seedlings. The tension zone model seems to offer the most adequate explanation of our observations, with selection against triploid hybrids and the spatial positioning of the hybrid zone. Despite selection against them, the triploid hybrids play an important role in the exchange of genes between the two species and therefore serve as a bridge for introgression. The presence of fertile triploids is essential for enriching the haplotype diversity between these species and for the development of new genetic lineages.

journal_name

Genes (Basel)

journal_title

Genes

authors

Šmíd J,Douda J,Krak K,Mandák B

doi

10.3390/genes11070770

subject

Has Abstract

pub_date

2020-07-09 00:00:00

issue

7

issn

2073-4425

pii

genes11070770

journal_volume

11

pub_type

杂志文章

相关文献

Genes文献大全
  • B Chromosomes in the Drosophila Genus.

    abstract：:Our current knowledge of B chromosome biology has been augmented by an increase in the number and diversity of species observed to carry B chromosomes as well as the use of next-generation sequencing for B chromosome genomic analysis. Within the genus Drosophila, B chromosomes have been observed in a handful of specie...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes9100470

    authors： Hanlon SL,Hawley RS

    更新日期：2018-09-27 00:00:00

  • Analysis of Gene Expression of miRNA-106b-5p and TRAIL in the Apoptosis Pathway in Gastric Cancer.

    abstract：:Helicobacter pylori (H. pylori) is one of the main causes of gastric gancer. TNF-related apoptosis-inducing ligand (TRAIL) is a protein able to promote apoptosis in cancer cells, however not in gastric cancer, which presents resistance to apoptosis via TRAIL. It is believed that MicroRNA-106b-5p might be involved in t...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11040393

    authors： Pereira J,Santos M,Delabio R,Barbosa M,Smith M,Payão S,Rasmussen L

    更新日期：2020-04-05 00:00:00

  • K-mer Content, Correlation, and Position Analysis of Genome DNA Sequences for the Identification of Function and Evolutionary Features.

    abstract：:In genome analysis, k-mer-based comparison methods have become standard tools. However, even though they are able to deliver reliable results, other algorithms seem to work better in some cases. To improve k-mer-based DNA sequence analysis and comparison, we successfully checked whether adding positional resolution is...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes8040122

    authors： Sievers A,Bosiek K,Bisch M,Dreessen C,Riedel J,Froß P,Hausmann M,Hildenbrand G

    更新日期：2017-04-19 00:00:00

  • From Genotype to Phenotype: Through Chromatin.

    abstract：:Advances in sequencing technologies have enabled the exploration of the genetic basis for several clinical disorders by allowing identification of causal mutations in rare genetic diseases. Sequencing technology has also facilitated genome-wide association studies to gather single nucleotide polymorphisms in common di...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes10020076

    authors： Romanowska J,Joshi A

    更新日期：2019-01-23 00:00:00

  • Convergent Evolution of the Seed Shattering Trait.

    abstract：:Loss of seed shattering is a key trait in crop domestication, particularly for grain crops. For wild plants, seed shattering is a crucial mechanism to achieve greater fitness, although in the agricultural context, this mechanism reduces harvesting efficiency, especially under dry conditions. Loss of seed shattering wa...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes10010068

    authors： Di Vittori V,Gioia T,Rodriguez M,Bellucci E,Bitocchi E,Nanni L,Attene G,Rau D,Papa R

    更新日期：2019-01-19 00:00:00

  • RNA Modifications Modulate Activation of Innate Toll-Like Receptors.

    abstract：:Self/foreign discrimination by the innate immune system depends on receptors that identify molecular patterns as associated to pathogens. Among others, this group includes endosomal Toll-like receptors, among which Toll-like receptors (TLR) 3, 7, 8, and 13 recognize and discriminate mammalian from microbial, potential...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes10020092

    authors： Freund I,Eigenbrod T,Helm M,Dalpke AH

    更新日期：2019-01-29 00:00:00

  • Distribution of the Warmblood Fragile Foal Syndrome Type 1 Mutation (PLOD1 c.2032G>A) in Different Horse Breeds from Europe and the United States.

    abstract：:Warmblood fragile foal syndrome (WFFS) is an autosomal recessive disorder caused by a single nucleotide variant in the procollagen-lysine-2-oxoglutarate-5-dioxygenase 1 gene (PLOD1:c.2032G>A, p.Gly678Arg). Homozygosity for the PLOD1 variant causes an Ehler-Danlos-like syndrome, which has to date only been reported in ...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11121518

    authors： Reiter S,Wallner B,Brem G,Haring E,Hoelzle L,Stefaniuk-Szmukier M,Długosz B,Piórkowska K,Ropka-Molik K,Malvick J,Penedo MCT,Bellone RR

    更新日期：2020-12-18 00:00:00

  • Coordinated Dialogue between UHRF1 and DNMT1 to Ensure Faithful Inheritance of Methylated DNA Patterns.

    abstract：:DNA methylation, catalyzed by DNA methyltransferases (DNMTs), is an epigenetic mark that needs to be faithfully replicated during mitosis in order to maintain cell phenotype during successive cell divisions. This epigenetic mark is located on the 5'-carbon of the cytosine mainly within cytosine⁻phosphate⁻guanine (CpG)...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes10010065

    authors： Bronner C,Alhosin M,Hamiche A,Mousli M

    更新日期：2019-01-18 00:00:00

  • Venous Thromboembolism in Prader-Willi Syndrome: A Questionnaire Survey.

    abstract：:Prader-Willi Syndrome Association (USA) monitors the ongoing health and welfare of individuals with Prader-Willi syndrome (PWS) through active communication with members by membership surveys and data registries. Thromboembolism and blood clots have emerged in clinical studies as significant risk factors for injury an...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10070550

    authors： Manzardo AM,Heinemann J,McManus B,Loker C,Loker J,Butler MG

    更新日期：2019-07-19 00:00:00

  • Epitranscriptomic Signatures in lncRNAs and Their Possible Roles in Cancer.

    abstract：:In contrast to the amazing exponential growth in knowledge related to long non-coding RNAs (lncRNAs) involved in cell homeostasis or dysregulated pathological states, little is known so far about the links between the chemical modifications occurring in lncRNAs and their function. Generally, ncRNAs are post-transcript...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes10010052

    authors： Dinescu S,Ignat S,Lazar AD,Constantin C,Neagu M,Costache M

    更新日期：2019-01-16 00:00:00

  • Study of mcr-1 Gene-Mediated Colistin Resistance in Enterobacteriaceae Isolated from Humans and Animals in Different Countries.

    abstract：:In this study, we aim to characterize the genetic environment of the plasmid-mediated colistin resistance gene mcr-1 in 25 Escherichia coli and seven Klebsiella pneumoniae strains from different countries and continents. Multilocus sequence typing, conjugation experiments, plasmid typing, and the presence and location...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes8120394

    authors： Hadjadj L,Riziki T,Zhu Y,Li J,Diene SM,Rolain JM

    更新日期：2017-12-19 00:00:00

  • tRNA-Derived Small RNAs: Biogenesis, Modification, Function and Potential Impact on Human Disease Development.

    abstract：:Transfer RNAs (tRNAs) are abundant small non-coding RNAs that are crucially important for decoding genetic information. Besides fulfilling canonical roles as adaptor molecules during protein synthesis, tRNAs are also the source of a heterogeneous class of small RNAs, tRNA-derived small RNAs (tsRNAs). Occurrence and th...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes9120607

    authors： Oberbauer V,Schaefer MR

    更新日期：2018-12-05 00:00:00

  • Comparative Analysis of Cotton Small RNAs and Their Target Genes in Response to Salt Stress.

    abstract：:Small RNAs play an important role in regulating plant responses to abiotic stress. Depending on the method of salt application, whether sudden or gradual, plants may experience either salt shock or salt stress, respectively. In this study, small RNA expression in response to salt shock and long-term salt stress in par...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes8120369

    authors： Yin Z,Han X,Li Y,Wang J,Wang D,Wang S,Fu X,Ye W

    更新日期：2017-12-05 00:00:00

  • Insights into Xylan Degradation and Haloalkaline Adaptation through Whole-Genome Analysis of Alkalitalea saponilacus, an Anaerobic Haloalkaliphilic Bacterium Capable of Secreting Novel Halostable Xylanase.

    abstract：:The obligately anaerobic haloalkaliphilic bacterium Alkalitalea saponilacus can use xylan as the sole carbon source and produce propionate as the main fermentation product. Using mixed carbon sources of 0.4% (w/v) sucrose and 0.1% (w/v) birch xylan, xylanase production from A. saponilacus was 3.2-fold greater than tha...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10010001

    authors： Liao Z,Holtzapple M,Yan Y,Wang H,Li J,Zhao B

    更新日期：2018-12-20 00:00:00

  • A Hybrid Clustering Algorithm for Identifying Cell Types from Single-Cell RNA-Seq Data.

    abstract：:Single-cell RNA sequencing (scRNA-seq) has recently brought new insight into cell differentiation processes and functional variation in cell subtypes from homogeneous cell populations. A lack of prior knowledge makes unsupervised machine learning methods, such as clustering, suitable for analyzing scRNA-seq . However,...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10020098

    authors： Zhu X,Li HD,Xu Y,Guo L,Wu FX,Duan G,Wang J

    更新日期：2019-01-29 00:00:00

  • Expression of ZNF695 Transcript Variants in Childhood B-Cell Acute Lymphoblastic Leukemia.

    abstract：:B-cell acute lymphoblastic leukemia is the most commonly diagnosed childhood malignancy worldwide; more than 50% of these cases are diagnosed in Mexico. Although the five-year survival rate is >80%, 30% of patients experience relapse with poor prognosis. Cancer-associated gene expression profiles have been identified ...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10090716

    authors： Rosa R,Villegas-Ruíz V,Caballero-Palacios MC,Pérez-López EI,Murata C,Zapata-Tarres M,Cárdenas-Cardos R,Paredes-Aguilera R,Rivera-Luna R,Juárez-Méndez S

    更新日期：2019-09-16 00:00:00

  • NetR and AttR, Two New Bioinformatic Tools to Integrate Diverse Datasets into Cytoscape Network and Attribute Files.

    abstract：:High-throughput technologies have allowed researchers to obtain genome-wide data from a wide array of experimental model systems. Unfortunately, however, new data generation tends to significantly outpace data re-utilization, and most high throughput datasets are only rarely used in subsequent studies or to generate n...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10060423

    authors： Halajyan A,Weingart N,Yeahia M,Loza-Coll M

    更新日期：2019-06-01 00:00:00

  • The Draft Genome of the Endangered Sichuan Partridge (Arborophila rufipectus) with Evolutionary Implications.

    abstract：:The Sichuan partridge (Arborophila rufipectus, Phasianidae, Galliformes) is distributed in south-west China, and classified as endangered grade. To examine the evolution and genomic features of Sichuan partridge, we de novo assembled the Sichuan partridge reference genome. The final draft assembly consisted of approxi...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10090677

    authors： Zhou C,Tu H,Yu H,Zheng S,Dai B,Price M,Wu Y,Yang N,Yue B,Meng Y

    更新日期：2019-09-05 00:00:00

  • Multigene Expression Assay for Assessment of the Immune Status of Atlantic Salmon.

    abstract：:We report the development of a multigene gene expression assay on the BioMark HD platform for the evaluation of immune competence (ImCom) in farmed Atlantic salmon. The first version of the assay included 92 genes selected on the basis of transcriptome analyses in 54 trials that challenged the immune system; annotatio...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11111236

    authors： Krasnov A,Afanasyev S,Nylund S,Rebl A

    更新日期：2020-10-22 00:00:00

  • Comparison of the fecal microbiota in feral and domestic goats.

    abstract：:Animals have co-evolved with mutualistic microbial communities, known as the microbiota, which are essential for organ development and function. We hypothesize that modern animal husbandry practices exert an impact on the intestinal microbiota. In this study, we compared the structure of the fecal microbiota between f...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes3010001

    authors： De Jesús-Laboy KM,Godoy-Vitorino F,Piceno YM,Tom LM,Pantoja-Feliciano IG,Rivera-Rivera MJ,Andersen GL,Domínguez-Bello MG

    更新日期：2011-12-21 00:00:00

  • Pulmonary Hypertension Remodels the Genomic Fabrics of Major Functional Pathways.

    abstract：:Pulmonary hypertension (PH) is a serious disorder with high morbidity and mortality rate. We analyzed the right-ventricular systolic pressure (RVSP), right-ventricular hypertrophy (RVH), lung histology, and transcriptomes of six-week-old male rats with PH induced by (1) hypoxia (HO), (2) administration of monocrotalin...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11020126

    authors： Mathew R,Huang J,Iacobas S,Iacobas DA

    更新日期：2020-01-23 00:00:00

  • From Chromosomes to Genome: Insights into the Evolutionary Relationships and Biogeography of Old World Knifefishes (Notopteridae; Osteoglossiformes).

    abstract：:In addition to its wide geographical distribution, osteoglossiform fishes represent one of the most ancient freshwater teleost lineages; making it an important group for systematic and evolutionary studies. These fishes had a Gondwanan origin and their past distribution may have contributed to the diversity present in...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes9060306

    authors： Barby FF,Ráb P,Lavoué S,Ezaz T,Bertollo LAC,Kilian A,Maruyama SR,Aguiar de Oliveira E,Artoni RF,Santos MH,Ilesanmi Jegede O,Hatanaka T,Tanomtong A,Liehr T,Cioffi MB

    更新日期：2018-06-19 00:00:00

  • Prospects and limitations of using endogenous neural stem cells for brain regeneration.

    abstract：:Neural stem cells (NSCs) are capable of producing a variety of neural cell types, and are indispensable for the development of the mammalian brain. NSCs can be induced in vitro from pluripotent stem cells, including embryonic stem cells and induced-pluripotent stem cells. Although the transplantation of these exogenou...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes2010107

    authors： Kaneko N,Kako E,Sawamoto K

    更新日期：2011-01-14 00:00:00

  • NF-YA Overexpression in Lung Cancer: LUSC.

    abstract：:The CCAAT box is recognized by the trimeric transcription factor NF-Y, whose NF-YA subunit is present in two major splicing isoforms, NF-YAl ("long") and NF-YAs ("short"). Little is known about the expression levels of NF-Y subunits in tumors, and nothing in lung cancer. By interrogating RNA-seq TCGA and GEO datasets,...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes10110937

    authors： Bezzecchi E,Ronzio M,Dolfini D,Mantovani R

    更新日期：2019-11-17 00:00:00

  • Age-Related Epigenetic Derangement upon Reprogramming and Differentiation of Cells from the Elderly.

    abstract：:Aging is a complex multi-layered phenomenon. The study of aging in humans is based on the use of biological material from hard-to-gather tissues and highly specific cohorts. The introduction of cell reprogramming techniques posed promising features for medical practice and basic research. Recently, a growing number of...

    journal_title：Genes

    pub_type： 杂志文章,评审

    doi：10.3390/genes9010039

    authors： Ravaioli F,Bacalini MG,Franceschi C,Garagnani P

    更新日期：2018-01-16 00:00:00

  • Identification of a Novel Imprinted Transcript in the Porcine GNAS Complex Locus Using Methylome and Transcriptome of Parthenogenetic Fetuses.

    abstract：:Genomic imprinting in domestic animals contributes to the variance of performance traits. However, research remains to be done on large-scale detection of epigenetic landscape of porcine imprinted loci including the GNAS complex locus. The purpose of this study was to generate porcine parthenogenetic fetuses and compr...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11010096

    authors： Ahn J,Wu H,Lee J,Hwang IS,Yu D,Ahn JS,Lee JW,Hwang S,Lee K

    更新日期：2020-01-14 00:00:00

  • The evolution of protein structures and structural ensembles under functional constraint.

    abstract：:Protein sequence, structure, and function are inherently linked through evolution and population genetics. Our knowledge of protein structure comes from solved structures in the Protein Data Bank (PDB), our knowledge of sequence through sequences found in the NCBI sequence databases (http://www.ncbi.nlm.nih.gov/), and...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes2040748

    authors： Siltberg-Liberles J,Grahnen JA,Liberles DA

    更新日期：2011-10-28 00:00:00

  • 46,XY,r(8)/45,XY,-8 Mosaicism as a Possible Mechanism of the Imprinted Birk-Barel Syndrome: A Case Study.

    abstract：:Ring chromosome 8 (r(8)) is one of the least frequent ring chromosomes. Usually, maternal chromosome 8 forms a ring, which can be lost from cells due to mitotic instability. The 8q24 region contains the imprinted KCNK9 gene, which is expressed from the maternal allele. Heterozygous KCNK9 mutations are associated with ...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11121473

    authors： Kashevarova AA,Nikitina TV,Mikhailik LI,Belyaeva EO,Vasilyev SA,Lopatkina ME,Fedotov DA,Fonova EA,Zarubin AA,Sivtsev AA,Skryabin NA,Nazarenko LP,Lebedev IN

    更新日期：2020-12-09 00:00:00

  • Cortical Granule Distribution and Expression Pattern of Genes Regulating Cellular Component Size, Morphogenesis, and Potential to Differentiation are Related to Oocyte Developmental Competence and Maturational Capacity In Vivo and In Vitro.

    abstract：:Polyspermia is an adverse phenomenon during mammalian fertilization when more than one sperm fuses with a single oocyte. The egg cell is prepared to prevent polyspermia by, among other ways, producing cortical granules (CGs), which are specialized intracellular structures containing enzymes that aim to harden the zona...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes11070815

    authors： Kulus M,Kranc W,Jeseta M,Sujka-Kordowska P,Konwerska A,Ciesiółka S,Celichowski P,Moncrieff L,Kocherova I,Józkowiak M,Kulus J,Wieczorkiewicz M,Piotrowska-Kempisty H,Skowroński MT,Bukowska D,Machatkova M,Hanulakova S,Mozd

    更新日期：2020-07-17 00:00:00

  • Genome-Wide Identification, Characterization and Expression Profiling of ADF Family Genes in Solanum lycopersicum L.

    abstract：:The actin depolymerizing factor (ADF) proteins have growth, development, defense-related and growth regulatory functions in plants. The present study used genome-wide analysis to investigate ADF family genes in tomato. Eleven tomato ADF genes were identified and differential expression patterns were found in different...

    journal_title：Genes

    pub_type： 杂志文章

    doi：10.3390/genes7100079

    authors： Khatun K,Robin AH,Park JI,Kim CK,Lim KB,Kim MB,Lee DJ,Nou IS,Chung MY

    更新日期：2016-09-29 00:00:00