Study of mcr-1 Gene-Mediated Colistin Resistance in Enterobacteriaceae Isolated from Humans and Animals in Different Countries.

Abstract:

:In this study, we aim to characterize the genetic environment of the plasmid-mediated colistin resistance gene mcr-1 in 25 Escherichia coli and seven Klebsiella pneumoniae strains from different countries and continents. Multilocus sequence typing, conjugation experiments, plasmid typing, and the presence and location of the insertion sequence ISApl1 were investigated. Whole genome sequencing of four E. coli was performed to analyse the genetic environment of the mcr-1 gene. Colistin minimum inhibitory concentration of mcr-1 strains varied from 3 to 32 µg/mL. Six E. coli sequence types were detected: ST 4015, ST 3997, ST 10, ST 93, ST 48, and ST 648. IncHI2, IncI2, and IncP plasmid types were predominant and were unrelated to a specific country of origin. ISApl1 was found in 69% of analysed plasmids that were mainly around the mcr-1 gene. Analysis of four closed mcr-1 plasmids revealed the integration of mcr-1 into hotspots. We found that the spread of mcr-1 gene was due to the diffusion of a composite transposon and not to the diffusion of a specific plasmid or a specific bacterial clone. The ease with which the mcr-1 gene integrates into various regions facilitates its dissemination among bacteria and explains its large diffusion all over the world, both in animals and in humans.

journal_name

Genes (Basel)

journal_title

Genes

authors

Hadjadj L,Riziki T,Zhu Y,Li J,Diene SM,Rolain JM

doi

10.3390/genes8120394

subject

Has Abstract

pub_date

2017-12-19 00:00:00

issue

12

issn

2073-4425

pii

genes8120394

journal_volume

8

pub_type

杂志文章

相关文献

Genes文献大全
  • Assessment of Genotoxicity in Human Cells Exposed to Modulated Electromagnetic Fields of Wireless Communication Devices.

    abstract::Modulated electromagnetic fields (wEMFs), as generated by modern communication technologies, have raised concerns about adverse health effects. The International Agency for Research on Cancer (IARC) classifies them as "possibly carcinogenic to humans" (Group 2B), yet, the underlying molecular mechanisms initiating and...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11040347

    authors: Schuermann D,Ziemann C,Barekati Z,Capstick M,Oertel A,Focke F,Murbach M,Kuster N,Dasenbrock C,Schär P

    更新日期:2020-03-25 00:00:00

  • Protein Changes in Response to Lead Stress of Lead-Tolerant and Lead-Sensitive Industrial Hemp Using SWATH Technology.

    abstract::Hemp is a Pb-tolerant and Pb-accumulating plant and the study of its tolerance mechanisms could facilitate the breeding of hemp with enhanced Pb tolerance and accumulation. In the present study, we took advantage of sequential window acquisition of all theoretical mass spectra (SWATH) technology to study the differenc...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050396

    authors: Xia C,Hong L,Yang Y,Yanping X,Xing H,Gang D

    更新日期:2019-05-22 00:00:00

  • Unravelling the Roles of Susceptibility Loci for Autoimmune Diseases in the Post-GWAS Era.

    abstract::Although genome-wide association studies (GWAS) have identified several hundred loci associated with autoimmune diseases, their mechanistic insights are still poorly understood. The human genome is more complex than single nucleotide polymorphisms (SNPs) that are interrogated by GWAS arrays. Apart from SNPs, it also c...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes9080377

    authors: Ye J,Gillespie KM,Rodriguez S

    更新日期:2018-07-27 00:00:00

  • Ancient Ancestry Informative Markers for Identifying Fine-Scale Ancient Population Structure in Eurasians.

    abstract::The rapid accumulation of ancient human genomes from various areas and time periods potentially enables the expansion of studies of biodiversity, biogeography, forensics, population history, and epidemiology into past populations. However, most ancient DNA (aDNA) data were generated through microarrays designed for mo...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9120625

    authors: Esposito U,Das R,Syed S,Pirooznia M,Elhaik E

    更新日期:2018-12-12 00:00:00

  • Identification and Conservation Analysis of Cis-Regulatory Elements in Pig Liver.

    abstract::The liver plays a key role in metabolism and affects pig production. However, the functional annotation of noncoding regions of the pig liver remains poorly understood. We revealed the landscape of cis-regulatory elements and their functional characterization in pig liver. We identified 102,373 cis-regulatory elements...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050348

    authors: Luan Y,Zhang L,Hu M,Xu Y,Hou Y,Li X,Zhao S,Zhao Y,Li C

    更新日期:2019-05-07 00:00:00

  • Dysregulated MicroRNA Expression Profiles and Potential Cellular, Circulating and Polymorphic Biomarkers in Non-Hodgkin Lymphoma.

    abstract::A large number of studies have focused on identifying molecular biomarkers, including microRNAs (miRNAs) to aid in the diagnosis and prognosis of the most common subtypes of non-Hodgkin lymphoma (NHL), Diffuse Large B-cell Lymphoma and Follicular Lymphoma. NHL is difficult to diagnose and treat with many cases becomin...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes7120130

    authors: Bradshaw G,Sutherland HG,Haupt LM,Griffiths LR

    更新日期:2016-12-17 00:00:00

  • DDB1 Regulates Sertoli Cell Proliferation and Testis Cord Remodeling by TGFβ Pathway.

    abstract::Testis cords are the embryonic precursors of the seminiferous tubules. Development of testis cords is a key event during embryonic testicular morphogenesis and is regulated by multiple signaling molecules produced by Sertoli cells. However, the exact nature and the cascade of molecular events underlying testis cord de...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10120974

    authors: Zheng W,Nazish J,Wahab F,Khan R,Jiang X,Shi Q

    更新日期:2019-11-26 00:00:00

  • Nucleolar Expression and Chromosomal Associations in Robertsonian Spermatocytes of Mus musculus domesticus.

    abstract::We studied and compared the nucleolar expression or nucleoli from specific bivalents in spermatocytes of the standard Mus musculus domesticus 2n=40, of Robertsonian (Rb) homozygotes 2n = 24 and heterozygotes 2n = 32. We analyzed 200 nuclear microspreads of each specific nucleolar chromosome and spermatocyte karyotype,...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10020120

    authors: López-Moncada F,Tapia D,Zuñiga N,Ayarza E,López-Fenner J,Redi CA,Berríos S

    更新日期:2019-02-06 00:00:00

  • NF-YA Overexpression in Lung Cancer: LUSC.

    abstract::The CCAAT box is recognized by the trimeric transcription factor NF-Y, whose NF-YA subunit is present in two major splicing isoforms, NF-YAl ("long") and NF-YAs ("short"). Little is known about the expression levels of NF-Y subunits in tumors, and nothing in lung cancer. By interrogating RNA-seq TCGA and GEO datasets,...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10110937

    authors: Bezzecchi E,Ronzio M,Dolfini D,Mantovani R

    更新日期:2019-11-17 00:00:00

  • Functional Haplotype of LIPC Induces Triglyceride-Mediated Suppression of HDL-C Levels According to Genome-Wide Association Studies.

    abstract::Hepatic lipase (encoded by LIPC) is a glycoprotein in the triacylglycerol lipase family and mainly synthesized in and secreted from the liver. Previous studies demonstrated that hepatic lipase is crucial for reverse cholesterol transport and modulating metabolism and the plasma levels of several lipoproteins. This stu...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes12020148

    authors: Liao YH,Er LK,Wu S,Ko YL,Teng MS

    更新日期:2021-01-22 00:00:00

  • Horizontally Acquired Homologs of Xenogeneic Silencers: Modulators of Gene Expression Encoded by Plasmids, Phages and Genomic Islands.

    abstract::Acquisition of mobile elements by horizontal gene transfer can play a major role in bacterial adaptation and genome evolution by providing traits that contribute to bacterial fitness. However, gaining foreign DNA can also impose significant fitness costs to the host bacteria and can even produce detrimental effects. T...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes11020142

    authors: Piña-Iturbe A,Suazo ID,Hoppe-Elsholz G,Ulloa-Allendes D,González PA,Kalergis AM,Bueno SM

    更新日期:2020-01-29 00:00:00

  • Cell Progeny in the Olfactory Bulb After Targeting Specific Progenitors with Different UbC-StarTrack Approaches.

    abstract::The large phenotypic variation in the olfactory bulb may be related to heterogeneity in the progenitor cells. Accordingly, the progeny of subventricular zone (SVZ) progenitor cells that are destined for the olfactory bulb is of particular interest, specifically as there are many facets of these progenitors and their m...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11030305

    authors: Sánchez-González R,Figueres-Oñate M,Ojalvo-Sanz AC,López-Mascaraque L

    更新日期:2020-03-13 00:00:00

  • Efficient Generation and Correction of Mutations in Human iPS Cells Utilizing mRNAs of CRISPR Base Editors and Prime Editors.

    abstract::In contrast to CRISPR/Cas9 nucleases, CRISPR base editors (BE) and prime editors (PE) enable predefined nucleotide exchanges in genomic sequences without generating DNA double strand breaks. Here, we employed BE and PE mRNAs in conjunction with chemically synthesized sgRNAs and pegRNAs for efficient editing of human i...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11050511

    authors: Sürün D,Schneider A,Mircetic J,Neumann K,Lansing F,Paszkowski-Rogacz M,Hänchen V,Lee-Kirsch MA,Buchholz F

    更新日期:2020-05-06 00:00:00

  • Identification of Loci Controlling the Dwarfism Trait in the White Sailfin Molly (Poecilia latipinna) Using Genome-Wide Association Studies Based on Genotyping-By-Sequencing.

    abstract::Dwarfism is a condition defined by low harvest weight in fish, but also results in strange body figures which may have potential for the selective breeding of new ornamental fish strains. The objectives of this study are to reveal the physiological causes of dwarfism and identify the genetic loci controlling this trai...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10060418

    authors: Shao F,Liu J,Ren M,Li J,Bao H,Wu C

    更新日期:2019-05-30 00:00:00

  • Plant TDP1 (Tyrosyl-DNA Phosphodiesterase 1): A Phylogenetic Perspective and Gene Expression Data Mining.

    abstract::The TDP1 (tyrosyl-DNA phosphodiesterase 1) enzyme removes the non-specific covalent intermediates between topoisomerase I and DNA, thus playing a crucial role in preventing DNA damage. While mammals possess only one TDP1 gene, in plants two genes (TDP1α and TDP1β) are present constituting a small gene subfamily. These...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11121465

    authors: Mutti G,Raveane A,Pagano A,Bertolini F,Semino O,Balestrazzi A,Macovei A

    更新日期:2020-12-07 00:00:00

  • Genome-Wide Profiling of Enterotoxigenic Staphylococcus aureus Strains Used for the Production of Naturally Contaminated Cheeses.

    abstract::Staphylococcus aureus is a major human pathogen and an important cause of livestock infections. More than 20 staphylococcal enterotoxins with emetic activity can be produced by specific strains responsible for staphylococcal food poisoning, one of the most common food-borne diseases. Whole genome sequencing provides a...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010033

    authors: Macori G,Bellio A,Bianchi DM,Chiesa F,Gallina S,Romano A,Zuccon F,Cabrera-Rubio R,Cauquil A,Merda D,Auvray F,Decastelli L

    更新日期:2019-12-27 00:00:00

  • Investigation of Precise Molecular Mechanistic Action of Tobacco-Associated Carcinogen `NNK´ Induced Carcinogenesis: A System Biology Approach.

    abstract::Cancer is the second deadliest disease listed by the WHO. One of the major causes of cancer disease is tobacco and consumption possibly due to its main component, 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK). A plethora of studies have been conducted in the past aiming to decipher the association of NNK with o...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10080564

    authors: Anukriti.,Dhasmana A,Uniyal S,Somvanshi P,Bhardwaj U,Gupta M,Haque S,Lohani M,Kumar D,Ruokolainen J,Kesari KK

    更新日期:2019-07-26 00:00:00

  • Monogenic diabetes: a diagnostic algorithm for clinicians.

    abstract::Monogenic forms of beta cell diabetes account for approximately 1%-2% of all cases of diabetes, yet remain underdiagnosed. Overlapping clinical features with common forms of diabetes, make diagnosis challenging. A genetic diagnosis of monogenic diabetes in many cases alters therapy, affects prognosis, enables genetic ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes4040522

    authors: Carroll RW,Murphy R

    更新日期:2013-09-26 00:00:00

  • Characterization and Transcriptome Studies of Autoinducer Synthase Gene from Multidrug Resistant Acinetobacter baumannii Strain 863.

    abstract::Quorum sensing (QS) is a cell-to-cell communication system that uses autoinducers as signaling molecules to enable inter-species and intra-species interactions in response to external stimuli according to the population density. QS allows bacteria such as Acinetobacter baumannii to react rapidly in response to environ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10040282

    authors: Ng CK,How KY,Tee KK,Chan KG

    更新日期:2019-04-08 00:00:00

  • A Transcriptome Analysis Identifies Biological Pathways and Candidate Genes for Feed Efficiency in DLY Pigs.

    abstract::Feed cost accounts for approximately 65-75% of overall commercial pork production costs. Therefore, improving the feed efficiency of pig production is important. In this study, 12 individuals with either extremely high (HE) or low (LE) feed efficiency were selected from 225 Duroc × (Landrace × Yorkshire) (DLY) pigs. A...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10090725

    authors: Wang X,Li S,Wu J,Ding R,Quan J,Zheng E,Yang J,Wu Z

    更新日期:2019-09-18 00:00:00

  • Novel Mutations in CLPP, LARS2, CDH23, and COL4A5 Identified in Familial Cases of Prelingual Hearing Loss.

    abstract::We report the underlying genetic causes of prelingual hearing loss (HL) segregating in eight large consanguineous families, ascertained from the Punjab province of Pakistan. Exome sequencing followed by segregation analysis revealed seven potentially pathogenic variants, including four novel alleles c.257G>A, c.6083A>...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11090978

    authors: Zafar S,Shahzad M,Ishaq R,Yousaf A,Shaikh RS,Akram J,Ahmed ZM,Riazuddin S

    更新日期:2020-08-22 00:00:00

  • Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.

    abstract::Illumina and nanopore sequencing technologies are powerful tools that can be used to determine the bacterial composition of complex microbial communities. In this study, we compared nasal microbiota results at genus level using both Illumina and nanopore 16S rRNA gene sequencing. We also monitored the progression of n...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11091105

    authors: Heikema AP,Horst-Kreft D,Boers SA,Jansen R,Hiltemann SD,de Koning W,Kraaij R,de Ridder MAJ,van Houten CB,Bont LJ,Stubbs AP,Hays JP

    更新日期:2020-09-21 00:00:00

  • Cryptic Diversity Hidden within the Leafminer Genus Liriomyza (Diptera: Agromyzidae).

    abstract::Leafminer insects of the genus Liriomyza are small flies whose larvae feed on the internal tissue of some of the most important crop plants for the human diet. Several of these pest species are highly uniform from the morphological point of view, meaning molecular data represents the only reliable taxonomic tool usefu...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9110554

    authors: Carapelli A,Soltani A,Leo C,Vitale M,Amri M,Mediouni-Ben Jemâa J

    更新日期:2018-11-15 00:00:00

  • Pathogenicity Islands Distribution in Non-O157 Shiga Toxin-Producing Escherichia coli (STEC).

    abstract::Shiga toxin-producing Escherichia coli (STEC) are foodborne pathogens associated with outbreaks and hemolytic-uremic syndrome. Cattle and meat foods are the main reservoir and infection source, respectively. Pathogenicity islands (PAIs) play an important role in STEC pathogenicity, and non-locus of the enterocyte effa...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9020081

    authors: Soledad-Cadona J,Bustamante AV,González J,Mariel-Sanso A

    更新日期:2018-02-10 00:00:00

  • Identification of a Novel Imprinted Transcript in the Porcine GNAS Complex Locus Using Methylome and Transcriptome of Parthenogenetic Fetuses.

    abstract::Genomic imprinting in domestic animals contributes to the variance of performance traits. However, research remains to be done on large-scale detection of epigenetic landscape of porcine imprinted loci including the GNAS complex locus. The purpose of this study was to generate porcine parthenogenetic fetuses and compr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010096

    authors: Ahn J,Wu H,Lee J,Hwang IS,Yu D,Ahn JS,Lee JW,Hwang S,Lee K

    更新日期:2020-01-14 00:00:00

  • Germination-Arrest Bacillus subtilis Spores as An Oral Delivery Vehicle of Grass Carp Reovirus (GCRV) Vp7 Antigen Augment Protective Immunity in Grass Carp (Ctenopharyngodon idella).

    abstract::Oral vaccination is a practical method for the active immunization of farmed fish in the matter of animal welfare and handling costs. However, it always shows insufficient protective immunity, mainly due to antigen degradation in the gastrointestinal tract (GIT). Bacillus subtilis spores have been shown to be able to ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111351

    authors: Sun R,Zhang M,Chen H,Wei Y,Ning D

    更新日期:2020-11-14 00:00:00

  • Characterization of the IS200/IS605 Insertion Sequence Family in Halanaerobium Hydrogeniformans.

    abstract::Mobile DNA elements play a significant evolutionary role by promoting genome plasticity. Insertion sequences are the smallest prokaryotic transposable elements. They are highly diverse elements, and the ability to accurately identify, annotate, and infer the full genomic impact of insertion sequences is lacking. Halan...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11050484

    authors: Sadler M,R Mormile M,L Frank R

    更新日期:2020-04-29 00:00:00

  • Characterization, Knockdown and Parental Effect of Hexokinase Gene of Cnaphalocrocis medinalis (Lepidoptera: Pyralidae) Revealed by RNA Interference.

    abstract::Hexokinase (HK) is a key enzyme in chitin biosynthesis in insects and plays an important role in development and energy regulation. It also performs a crucial role in the synthesis of Glucose-6-phosphate and its putative functions are studied via injection of dsRNA corresponding to the hexokinase gene from Cnaphalocro...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111258

    authors: Shakeel M,Du J,Li SW,Zhou YJ,Sarwar N,Bukhari SAH

    更新日期:2020-10-26 00:00:00

  • Selection of Suitable Reference Genes for RT-qPCR Gene Expression Analysis in Siberian Wild Rye (Elymus sibiricus) under Different Experimental Conditions.

    abstract::Elymus sibiricus, which is a perennial and self-pollinated grass, is the typical species of the genus Elymus, which plays an important role in forage production and ecological restoration. No reports have, so far, systematically described the selection of optimal reference genes for reverse transcriptase quantitative ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10060451

    authors: Zhang J,Xie W,Yu X,Zhang Z,Zhao Y,Wang N,Wang Y

    更新日期:2019-06-13 00:00:00

  • Dynamin-Related Protein 1 at the Crossroads of Cancer.

    abstract::Mitochondrial dynamics are known to have an important role in so-called age-related diseases, including cancer. Mitochondria is an organelle involved in many key cellular functions and responds to physiologic or stress stimuli by adapting its structure and function. Perhaps the most important structural changes involv...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes9020115

    authors: Lima AR,Santos L,Correia M,Soares P,Sobrinho-Simões M,Melo M,Máximo V

    更新日期:2018-02-21 00:00:00