Abstract:
BACKGROUND:Microbiota from different niches within the canine oral cavity were profiled and compared. Supragingival plaque and stimulated saliva, were collected alongside samples from the buccal and tongue dorsum mucosa, from 14 Labrador retrievers at three timepoints within a 1 month timeframe. The V3-V4 region of the 16S rRNA gene was sequenced via Illumina MiSeq. RESULTS:Supragingival plaque microbiota had the highest bacterial diversity and the largest number of significant differences in individual taxa when compared to the other oral niches. Stimulated saliva exhibited the highest variability in microbial composition between dogs, yet the lowest bacterial diversity amongst all the niches. Overall, the bacteria of the buccal and tongue dorsum mucosa were most similar. CONCLUSIONS:The bacterial community profiles indicated three discrete oral niches: soft tissue surfaces (buccal and tongue dorsum mucosa), hard tissue surface (supragingival plaque) and saliva. The ability to distinguish the niches by their microbiota signature offers the potential for microbial biomarkers to be identified in each unique niche for diagnostic use.
journal_name
BMC Microbioljournal_title
BMC microbiologyauthors
Ruparell A,Inui T,Staunton R,Wallis C,Deusch O,Holcombe LJdoi
10.1186/s12866-020-1704-3subject
Has Abstractpub_date
2020-02-28 00:00:00pages
42issue
1issn
1471-2180pii
10.1186/s12866-020-1704-3journal_volume
20pub_type
杂志文章相关文献
BMC MICROBIOLOGY文献大全abstract:BACKGROUND:The genome of Arthrobacter sp. strain FB24 contains a chromate resistance determinant (CRD), consisting of a cluster of 8 genes located on a 10.6 kb fragment of a 96 kb plasmid. The CRD includes chrA, which encodes a putative chromate efflux protein, and three genes with amino acid similarities to the amino ...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-9-199
更新日期:2009-09-16 00:00:00
abstract:BACKGROUND:Brucellosis is an important zoonosis caused by the genus Brucella. In addition Brucella represents potential biological warfare agents due to the high contagious rates for humans and animals. Therefore, the strain typing epidemiological tool may be crucial for tracing back source of infection in outbreaks an...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-9-66
更新日期:2009-04-07 00:00:00
abstract:BACKGROUND:Salmonella enteritidis is suggested to translocate in the small intestine. In vivo it induces gene expression changes in the ileal mucosa and Peyer's patches. Stimulation of Salmonella translocation by dietary prebiotics fermented in colon suggests involvement of the colon as well. However, effects of Salmon...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-7-84
更新日期:2007-09-12 00:00:00
abstract:BACKGROUND:Bifidobacteria is one of the major gut commensal groups found in infants. Their colonization is commonly associated with beneficial effects to the host through mechanisms like niche occupation and nutrient competition against pathogenic bacteria. Iron is an essential element necessary for most microorganisms...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-014-0334-z
更新日期:2015-01-16 00:00:00
abstract:BACKGROUND:Fecal microbiota transplantation (FMT) has been recently approved by FDA for the treatment of refractory recurrent clostridial colitis (rCDI). Success of FTM in treatment of rCDI led to a number of studies investigating the effectiveness of its application in the other gastrointestinal diseases. However, in ...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-019-1689-y
更新日期:2019-12-30 00:00:00
abstract:BACKGROUND:Enterobacterial common antigen (ECA) is a family-specific surface antigen shared by all members of the Enterobacteriaceae family. Previous studies showed that the loss of ECA results in Salmonella attenuation, indicating its usefulness as a vaccine candidate for Salmonella infection, but no studies have show...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-020-01837-0
更新日期:2020-06-08 00:00:00
abstract:BACKGROUND:We performed a 12-month cohort study of the stability and resilience of the intestinal microbiota of healthy children in daycare in Denmark in relation to diarrheal events and exposure to known risk factors for gastrointestinal health such as travelling and antibiotic use. In addition, we analyzed how gut mi...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-018-1367-5
更新日期:2018-12-22 00:00:00
abstract:BACKGROUND:Wolbachia, one of the most abundant taxa of intracellular Alphaproteobacteria, is widespread among arthropods and filarial nematodes. The presence of these maternally inherited bacteria is associated with modifications of host fitness, including a variety of reproductive abnormalities, such as cytoplasmic in...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-019-1652-y
更新日期:2019-12-24 00:00:00
abstract:BACKGROUND:Vibrio parahaemolyticus is a food-borne pathogen causing inflammation of the gastrointestinal epithelium. Pathogenic strains of this bacterium possess two Type III Secretion Systems (TTSS) that deliver effector proteins into host cells. In order to better understand human host cell responses to V. parahaemol...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-10-329
更新日期:2010-12-30 00:00:00
abstract:BACKGROUND:Bloodstream infections represent serious conditions carrying a high mortality and morbidity rate. Rapid identification of microorganisms and prompt institution of adequate antimicrobial therapy is of utmost importance for a successful outcome. Aiming at the development of a rapid, simplified and efficient pr...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-015-0594-2
更新日期:2015-11-06 00:00:00
abstract:BACKGROUND:Flavobacterium columnare (Bacteroidetes) is the causative agent of columnaris disease in farmed freshwater fish around the world. The bacterium forms three colony morphotypes (Rhizoid, Rough and Soft), but the differences of the morphotypes are poorly known. We studied the virulence of the morphotypes produc...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-14-170
更新日期:2014-06-26 00:00:00
abstract:BACKGROUND:Chronic wound pathogenic biofilms are host-pathogen environments that colonize and exist as a cohabitation of many bacterial species. These bacterial populations cooperate to promote their own survival and the chronic nature of the infection. Few studies have performed extensive surveys of the bacterial popu...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-8-43
更新日期:2008-03-06 00:00:00
abstract:BACKGROUND:Generation of extended- spectrum β- lactamases is one of the major mechanisms by which clinical Klebsiella pneumoniae develop resistance to antibiotics. Combined antibiotics prove to be a relatively effective method of controlling such resistant strains. Some of Chinese herbal active ingredients are known to...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-016-0797-1
更新日期:2016-08-08 00:00:00
abstract:BACKGROUND:Streptococcus agalactiae (GBS) is a common pathogen to infect newborn, woman, the elderly, and immuno-compromised human and fish. 37 fish isolates and 554 human isolates of the GBS in 2007-2012 were investigated in serotypes, antibiotic susceptibility, genetic difference and pathogenicity to tilapia. RESULT...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-016-0794-4
更新日期:2016-08-02 00:00:00
abstract:BACKGROUND:Epitope tagging is a powerful strategy to study the function of proteins. Although tools for C-terminal protein tagging in the ciliated protozoan Tetrahymena thermophila have been developed, N-terminal protein tagging in this organism is still technically demanding. RESULTS:In this study, we have establishe...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-10-191
更新日期:2010-07-13 00:00:00
abstract:BACKGROUND:Globally, staphylococci have developed resistance to many antibiotics. New approaches to chemotherapy are needed and one such approach could be to use plant derived actives with conventional antibiotics in a synergestic way. The purpose of this study was to isolate α-mangostin from the mangosteen (Garcinia m...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-016-0814-4
更新日期:2016-08-26 00:00:00
abstract:BACKGROUND:The Uzon Caldera is one of the places on our planet with unique geological, ecological, and microbiological characteristics. Uzon oil is the youngest on Earth. Uzon oil has unique composition, with low proportion of heavy fractions and relatively high content of saturated hydrocarbons. Microbial communities ...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-020-02012-1
更新日期:2020-11-24 00:00:00
abstract:BACKGROUND:The Beijing lineage of Mycobacterium tuberculosis is causing concern due to its global distribution and its involvement in severe outbreaks. Studies focused on this lineage are mainly restricted to geographical settings where its prevalence is high, whereas those in other areas are scarce. In this study, we ...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-10-151
更新日期:2010-05-25 00:00:00
abstract:BACKGROUND:Predicting antibiotic resistance before it emerges at clinical settings constitutes a novel approach for preventing and fighting resistance of bacterial pathogens. To analyse the possibility that novel plasmid-encoded quinolone resistance determinants (Qnr) can emerge and disseminate among bacterial pathogen...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-8-148
更新日期:2008-09-16 00:00:00
abstract:ERRATUM:Upon publication of the original article (1) it was highlighted by the authors that a grant awarded to support the research work of the study was missed in the acknowledgements. It should also be acknowledged that the grant titled "Genotyping and Molecular Epidemiological Characteristic of Bacillus anthracis in...
journal_title:BMC microbiology
pub_type: 杂志文章,已发布勘误
doi:10.1186/s12866-018-1172-1
更新日期:2018-04-12 00:00:00
abstract:BACKGROUND:Microorganisms are a large and diverse form of life. Many of them live in association with large multicellular organisms, developing symbiotic relations with the host and some have even evolved to form obligate endosymbiosis. All Carpenter ants (genus Camponotus) studied hitherto harbour primary endosymbioti...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-9-29
更新日期:2009-02-06 00:00:00
abstract:BACKGROUND:Biofilms are ubiquitous. For instance, the majority of medical infections are thought to involve biofilms. However even after decades of investigation, the in vivo efficacy of many antimicrobial strategies is still debated suggesting there is a need for better understanding of biofilm antimicrobial tolerance...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-10-185
更新日期:2010-07-07 00:00:00
abstract:BACKGROUND:The Bacillus anthracis S-layer protein, BslA, plays a crucial role in mammalian infection. BslA is required to mediate adherence between host cells and vegetative forms of bacteria and this interaction promotes target organs adherence and blood-brain barrier (BBB) penetration in vivo. This study attempts to ...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-016-0802-8
更新日期:2016-08-11 00:00:00
abstract:BACKGROUND:For a good probiotic candidate, the abilities to adhere to intestinal epithelium and to fortify barrier function are considered to be crucial for colonization and functionality of the strain. The strain Lactobacillus acidophilus LAB20 was isolated from the jejunum of a healthy dog, where it was found to be t...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-014-0337-9
更新日期:2015-01-16 00:00:00
abstract:BACKGROUND:The flame-oxidized stainless steel anode (FO-SSA) is a newly developed electrode that enhances microbial fuel cell (MFC) power generation; however, substrate preference and community structure of the biofilm developed on FO-SSA have not been well characterized. Herein, we investigated the community on FO-SSA...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-017-1053-z
更新日期:2017-06-29 00:00:00
abstract:BACKGROUND:Abundant populations of bacteria have been observed on Mir and the International Space Station. While some experiments have shown that bacteria cultured during spaceflight exhibit a range of potentially troublesome characteristics, including increases in growth, antibiotic resistance and virulence, other stu...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-13-241
更新日期:2013-11-06 00:00:00
abstract:BACKGROUND:Antimicrobial helper-compounds may reverse antimicrobial resistance. Sertraline, a antidepressant drug, has been suggested as a tetracycline helper-compound. Tetracycline is the preferred antimicrobial for treatment of enteric diseases in pigs. This study is the first to evaluate the potency of sertraline as...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/s12866-018-1383-5
更新日期:2019-01-11 00:00:00
abstract:BACKGROUND:Emergence of drug resistant varieties of tuberculosis is posing a major threat to global tuberculosis eradication programmes. Although several approaches have been explored to counter resistance, there has been limited success due to a lack of understanding of how resistance emerges in bacteria upon drug tre...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-8-234
更新日期:2008-12-23 00:00:00
abstract:BACKGROUND:Urine within the urinary tract is commonly regarded as "sterile" in cultivation terms. Here, we present a comprehensive in-depth study of bacterial 16S rDNA sequences associated with urine from healthy females by means of culture-independent high-throughput sequencing techniques. RESULTS:Sequencing of the V...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-11-244
更新日期:2011-11-02 00:00:00
abstract:BACKGROUND:Iron is an essential nutrient but can be toxic at high intracellular concentrations and organisms have evolved tightly regulated mechanisms for iron uptake and homeostasis. Information on iron management mechanisms is available for organisms living at circumneutral pH. However, very little is known about how...
journal_title:BMC microbiology
pub_type: 杂志文章
doi:10.1186/1471-2180-8-203
更新日期:2008-11-24 00:00:00