Next-generation sequencing reveals a novel role of lysine-specific demethylase 1 in adhesion of rhabdomyosarcoma cells.

Abstract:

:Lysine-specific demethylase 1 (LSD1), a histone lysine demethylase with the main specificity for H3K4me2, has been shown to be overexpressed in rhabdomyosarcoma (RMS) tumor samples. However, its role in RMS biology is not yet well understood. Here, we identified a new role of LSD1 in regulating adhesion of RMS cells. Genetic knockdown of LSD1 profoundly suppressed clonogenic growth in a panel of RMS cell lines, whereas LSD1 proved to be largely dispensable for regulating cell death and short-term survival. Combined RNA and ChIP-sequencing performed to analyze RNA expression and histone methylation at promoter regions revealed a gene set enrichment for adhesion-associated terms upon LSD1 knockdown. Consistently, LSD1 knockdown significantly reduced adhesion to untreated surfaces. Importantly, precoating of the plates with the adhesives collagen I or fibronectin rescued this reduced adhesion of LSD1 knockdown cells back to levels of control cells. Using KEGG pathway analysis, we identified 17 differentially expressed genes (DEGs) in LSD1 knockdown cells related to adhesion processes, which were validated by qRT-PCR. Combining RNA and ChIP-sequencing results revealed that, within this set of genes, SPP1, C3AR1, ITGA10 and SERPINE1 also exhibited increased H3K4me2 levels at their promoter regions in LSD1 knockdown compared to control cells. Indeed, LSD1 ChIP experiments confirmed enrichment of LSD1 at their promoter regions, suggesting a direct transcriptional regulation by LSD1. By identifying a new role of LSD1 in the modulation of cell adhesion and clonogenic growth of RMS cells, these findings highlight the importance of LSD1 in RMS.

journal_name

Int J Cancer

authors

Haydn T,Kehr S,Willmann D,Metzger E,Schüle R,Fulda S

doi

10.1002/ijc.32806

subject

Has Abstract

pub_date

2020-06-15 00:00:00

pages

3435-3449

issue

12

eissn

0020-7136

issn

1097-0215

journal_volume

146

pub_type

杂志文章
  • Effect of age at inoculation of asbestos on occurrence of mesotheliomas in rats.

    abstract::An experiment in which rats were injected intrapleurally with asbestos, the injection taking place at an age of either 2 or 10 months, is reported. In the former group 19 out of 48 rats developed a mesothelioma compared with 17 out of 90 in the latter group. However, by considering the two groups at equal times after ...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.2910170410

    authors: Berry G,Wagner JC

    更新日期:1976-04-15 00:00:00

  • Induction of plasma membrane alterations in AKR-2B mouse embryo fibroblasts by endogenous growth factors from malignant human cells.

    abstract::AKR-2B mouse fibroblasts were treated with 50 micrograms/ml of crude transforming growth factor (TGF) of human origin. Cell surface proteins of treated cells were radioiodinated and compared to untreated cells at various times after the addition of TGF. Treated cells showed a severalfold increase (approximately 6-fold...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.2910330121

    authors: Marks ME,Brattain MG

    更新日期:1984-01-15 00:00:00

  • Improving identification of lynch syndrome patients: a comparison of research data with clinical records.

    abstract::Current evidence suggests poor identification and referral of Lynch syndrome patients. This study evaluated the strategies by which patients with endometrial cancer were referred to genetics services. Data from clinic-based patients with endometrial cancer enrolled through the Australian National Endometrial Cancer po...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.27978

    authors: Tan YY,McGaughran J,Ferguson K,Walsh MD,Buchanan DD,Young JP,Webb PM,Obermair A,Spurdle AB,ANECS Group.

    更新日期:2013-06-15 00:00:00

  • Developing new targeting strategy for androgen receptor variants in castration resistant prostate cancer.

    abstract::The presence of androgen receptor variant 7 (AR-V7) variants becomes a significant hallmark of castration-resistant prostate cancer (CRPC) relapsed from hormonal therapy and is associated with poor survival of CRPC patients because of lacking a ligand-binding domain. Currently, it still lacks an effective agent to tar...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.30893

    authors: Wang B,Lo UG,Wu K,Kapur P,Liu X,Huang J,Chen W,Hernandez E,Santoyo J,Ma SH,Pong RC,He D,Cheng YQ,Hsieh JT

    更新日期:2017-11-15 00:00:00

  • Differential activation of cell death and autophagy results in an increased cytotoxic potential for trifluorothymidine compared to 5-fluorouracil in colon cancer cells.

    abstract::Trifluorothymidine (TFT) is part of the oral drug formulation TAS-102. Both 5-fluorouracil (5-FU) and TFT can inhibit thymidylate synthase and be incorporated into DNA. TFT shows only moderate cross-resistance to 5-FU. Therefore, we examined whether mechanistic differences in cell death could underlie their different ...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.24943

    authors: Bijnsdorp IV,Peters GJ,Temmink OH,Fukushima M,Kruyt FA

    更新日期:2010-05-15 00:00:00

  • Colorectal cancer prevention by an optimized colonoscopy protocol in routine practice.

    abstract::We conducted a retrospective cohort study to investigate the colorectal cancer (CRC) incidence and mortality prevention achievable in clinical practice with an optimized colonoscopy protocol targeting near-complete polyp clearance. The protocol consisted of: (i) telephonic reinforcement of bowel preparation instructio...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.29228

    authors: Xirasagar S,Li YJ,Hurley TG,Tsai MH,Hardin JW,Hurley DM,Hebert JR,de Groen PC

    更新日期:2015-03-15 00:00:00

  • Comparison of DNA hypermethylation patterns in different types of uterine cancer: cervical squamous cell carcinoma, cervical adenocarcinoma and endometrial adenocarcinoma.

    abstract::The incidence of cervical adenocarcinoma (CA) is rising, whereas the incidence of cervical squamous cell carcinoma (CSCC) continues to decrease. However, it is still unclear whether different molecular characteristics underlie these 2 types of cervical carcinoma. To better understand the epigenetic characteristics of ...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.21609

    authors: Kang S,Kim JW,Kang GH,Lee S,Park NH,Song YS,Park SY,Kang SB,Lee HP

    更新日期:2006-05-01 00:00:00

  • Clonality of multifocal urothelial carcinomas: 10 years of molecular genetic studies.

    abstract::Multifocal occurrence and frequent recurrence are characteristic features of urothelial carcinomas of both the urinary bladder and the upper urinary tract. To describe the clonal nature of these tumors, 2 theories have been proposed. The monoclonality hypothesis describes the multiple tumors as descendants of a single...

    journal_title:International journal of cancer

    pub_type: 杂志文章,评审

    doi:10.1002/ijc.10544

    authors: Hafner C,Knuechel R,Stoehr R,Hartmann A

    更新日期:2002-09-01 00:00:00

  • Antagonism of chemokine receptor CXCR3 inhibits osteosarcoma metastasis to lungs.

    abstract::Metastasis continues to be the leading cause of mortality for patients with cancer. Several years ago, it became clear that chemokines and their receptors could control the tumor progress. CXCR3 has now been identified in many cancers including osteosarcoma and CXCR3 ligands were expressed by lungs that are the primar...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.24665

    authors: Pradelli E,Karimdjee-Soilihi B,Michiels JF,Ricci JE,Millet MA,Vandenbos F,Sullivan TJ,Collins TL,Johnson MG,Medina JC,Kleinerman ES,Schmid-Alliana A,Schmid-Antomarchi H

    更新日期:2009-12-01 00:00:00

  • Biallelic deletion within 16p13.13 including SOCS-1 in Karpas1106P mediastinal B-cell lymphoma line is associated with delayed degradation of JAK2 protein.

    abstract::Activity of Janus kinase 2 (JAK2) in the JAK2/STAT5 signaling pathway is critically controlled by suppressor of cytokine signaling-1 (SOCS-1). We have previously shown that SOCS-1 is biallelically mutated in the primary mediastinal B-cell lymphoma (PMBL) cell line MedB-1, resulting in impaired JAK2 degradation and sus...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.21485

    authors: Melzner I,Weniger MA,Bucur AJ,Brüderlein S,Dorsch K,Hasel C,Leithäuser F,Ritz O,Dyer MJ,Barth TF,Möller P

    更新日期:2006-04-15 00:00:00

  • Alterations of 3p21.31 tumor suppressor genes in head and neck squamous cell carcinoma: Correlation with progression and prognosis.

    abstract::The aim of our study was to analyze the alterations of some candidate tumor suppressor genes (TSGs) viz. LIMD1, LTF, CDC25A, SCOTIN, RASSF1A and CACNA2D2 located in the chromosomal region 3p21.31 associated with the development of early dysplastic lesions of head and neck. In analysis of 72 dysplastic lesions and 116 ...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.23834

    authors: Ghosh S,Ghosh A,Maiti GP,Alam N,Roy A,Roy B,Roychoudhury S,Panda CK

    更新日期:2008-12-01 00:00:00

  • Inhibition of store-operated calcium entry contributes to the anti-proliferative effect of non-steroidal anti-inflammatory drugs in human colon cancer cells.

    abstract::Non-steroidal anti-inflammatory drugs (NSAIDs) inhibit proliferation and angiogenesis in colorectal cancer. We examined a possible involvement of store-operated calcium (SOC) entry in human colon carcinoma cells (HRT-18), which require calcium for proliferation. Acetyl-salicylic-acid (ASA), mefenamic acid (MEF) and su...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.1280

    authors: Weiss H,Amberger A,Widschwendter M,Margreiter R,Ofner D,Dietl P

    更新日期:2001-06-15 00:00:00

  • Expression of mucin-associated tumor antigens is altered by cell density.

    abstract::Mucin-associated sialylated Lewis antigens are implicated in tumor cell metastasis and are used in several tests for pancreatic cancer. Despite their clinical importance, little is known about the structures of the oligosaccharides of pancreatic cancer mucins or about the regulation of their synthesis or of the synthe...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0215(19970729)72:3<457::aid-ijc

    authors: Yamashita Y,Ho JJ,Cheng S,Siddiki B,Chung YS,Sowa M,Kim YS

    更新日期:1997-07-29 00:00:00

  • Human papillomavirus capsids preferentially bind and infect tumor cells.

    abstract::We previously determined that human papillomavirus (HPV) virus-like particles (VLPs) and pseudovirions (PsV) did not, respectively, bind to or infect intact epithelium of the cervicovaginal tract. However, they strongly bound heparan sulfate proteoglycans (HSPG) on the basement membrane of disrupted epithelium and inf...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.29823

    authors: Kines RC,Cerio RJ,Roberts JN,Thompson CD,de Los Pinos E,Lowy DR,Schiller JT

    更新日期:2016-02-15 00:00:00

  • Inhibition of a complement regulator in vivo enhances antibody therapy in a model of mammary adenocarcinoma.

    abstract::Membrane-bound complement regulatory proteins provide tumor cells with protection from antibody and complement in vitro. However, complement regulators are widely expressed on normal tissue, and inhibiting the function of complement regulatory proteins on tumor cells in vivo has not been investigated due to the absenc...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.20178

    authors: Imai M,Ohta R,Okada N,Tomlinson S

    更新日期:2004-07-20 00:00:00

  • Radiation sensitization of glioblastoma by cilengitide has unanticipated schedule-dependency.

    abstract::We investigated whether cilengitide could amplify the antitumor effects of radiotherapy in an orthotopic rat glioma xenograft model. Cilengitide is a specific inhibitor of alphav series integrins, and acts as an antiangiogenic. U251 human glioma cells express alphavbeta3 and alphavbeta5 integrins. We used in vitro ass...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.24240

    authors: Mikkelsen T,Brodie C,Finniss S,Berens ME,Rennert JL,Nelson K,Lemke N,Brown SL,Hahn D,Neuteboom B,Goodman SL

    更新日期:2009-06-01 00:00:00

  • Overuse of antianaerobic drug is associated with poor postchemotherapy prognosis of patients with hepatocellular carcinoma.

    abstract::Overuse of antibiotic drugs alters the composition of gut microbiota and has detrimental effects on the host. In our study, we investigated association of gut flora and antibiotics in the prognosis of patients with liver cancer who have undergone chemotherapy by analyzing two independent clinical studies. We retrospec...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.32339

    authors: Iida N,Mizukoshi E,Yamashita T,Terashima T,Arai K,Seishima J,Kaneko S

    更新日期:2019-11-15 00:00:00

  • Estrogenic and anti-estrogenic regulation of estrogen receptor in MCF-7 breast-cancer cells: comparison of immunocytochemical data with biochemical measurements.

    abstract::Data from immunocytochemical assessment of estrogen receptor (ER) regulation in MCF-7 cells under estrogenic and anti-estrogenic stimulation were compared with those obtained by enzyme immunoassay (Abbott ER-EIA). Similar trends were observed, although ER level variations were less marked when assessed immunocytochemi...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0215(19981209)78:6<760::aid-ijc

    authors: Seo HS,Larsimont D,Querton G,El Khissiin A,Laios I,Legros N,Leclercq G

    更新日期:1998-12-09 00:00:00

  • Concurrent inhibition of PI3K and mTORC1/mTORC2 overcomes resistance to rapamycin induced apoptosis by down-regulation of Mcl-1 in mantle cell lymphoma.

    abstract::Mantle cell lymphoma (MCL) is an aggressive form of Non-Hodgkin-lymphoma (NHL) with an ongoing need for novel treatments. Apart from the translocation t(11:14), which facilitates constitutive transcription of cyclin D1, additional aberrations are frequently observed in MCL, including a recurrent dysregulation of the p...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.28206

    authors: Müller A,Zang C,Chumduri C,Dörken B,Daniel PT,Scholz CW

    更新日期:2013-10-15 00:00:00

  • Inhibition by lymphoblastoid interferon of growth of cells derived from the human breast.

    abstract::Human lymphoblastoid interferon inhibited the growth in vitro of fibroblasts and epithelial cells from normal, hyperplastic and neoplastic human breast tissue. At an interferon concentration of 10(3) inter-national units (IU) per ml, the inhibitory effects on monolayer growth were completely reversible but the growth ...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.2910220307

    authors: Balkwill F,Watling D,Taylor-Papadimitriou J

    更新日期:1978-09-15 00:00:00

  • Transient immunological and clinical effectiveness of treating mice bearing premalignant oral lesions with PD-1 antibodies.

    abstract::A carcinogen-induced premalignant oral lesion model that progresses to oral cancer was used to examine the impact of blocking PD-1 on cytokine expression and on progression of lesions to cancer. The results of this study show increased production of IL-2 and the inflammatory cytokines IL-6, IL-17 and TNF-α by spleen c...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.30543

    authors: Levingston CA,Young MR

    更新日期:2017-04-01 00:00:00

  • p53 and human papillomavirus DNA in renal pelvic and ureteral carcinoma including dysplastic lesions.

    abstract::Ninety-eight cases of transitional-cell carcinoma (TCC) of the renal pelvis and ureter, including dysplastic lesions, were studied for tumor incorporation of human papillomavirus (HPV) type-16 and type-18 DNA by in situ hybridization (ISH) with DNA probes for each HPV viral type. Immunohistochemical analysis of p53 ex...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.2910640503

    authors: Furihata M,Yamasaki I,Ohtsuki Y,Sonobe H,Morioka M,Yamamoto A,Terao N,Kuwahara M,Fujisaki N

    更新日期:1995-10-20 00:00:00

  • Novel targets for sensitizing breast cancer cells to TRAIL-induced apoptosis with siRNA delivery.

    abstract::Tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) induces apoptosis in variety of cancer cells without affecting most normal cells, which makes it a promising agent for cancer therapy. However, TRAIL therapy is clinically not effective due to resistance induction. To identify novel regulators of TRAIL th...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.31079

    authors: Thapa B,Bahadur Kc R,Uludağ H

    更新日期:2018-02-01 00:00:00

  • Cancer risk among patients with condylomata acuminata.

    abstract::Condylomata acuminata have been shown to increase the risk of anogenital cancers. However, previous studies have been of limited sample size and/or short follow-up duration, which prevent precise estimates of long-term excess risk, especially for specific cancer sites. We estimated the risk of specific cancers in a la...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.21892

    authors: Nordenvall C,Chang ET,Adami HO,Ye W

    更新日期:2006-08-15 00:00:00

  • A phosphoarray platform is capable of personalizing kinase inhibitor therapy in head and neck cancers.

    abstract::Tyrosine kinase inhibitors are effective treatments for cancers. Knowing the specific kinase mutants that drive the underlying cancers predict therapeutic response to these inhibitors. Thus, the current protocol for personalized cancer therapy involves genotyping tumors in search of various driver mutations and subseq...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.31045

    authors: Klinghammer K,Keller J,George J,Hoffmann J,Chan EL,Hayman MJ

    更新日期:2018-01-01 00:00:00

  • Breast cancer survival in sub-Saharan Africa by age, stage at diagnosis and human development index: A population-based registry study.

    abstract::Breast cancer is the leading cancer diagnosis and second most common cause of cancer deaths in sub-Saharan Africa (SSA). Yet, there are few population-level survival data from Africa and none on the survival differences by stage at diagnosis. Here, we estimate breast cancer survival within SSA by area, stage and count...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.32406

    authors: Joko-Fru WY,Miranda-Filho A,Soerjomataram I,Egue M,Akele-Akpo MT,N'da G,Assefa M,Buziba N,Korir A,Kamate B,Traore C,Manraj S,Lorenzoni C,Carrilho C,Hansen R,Finesse A,Somdyala N,Wabinga H,Chingonzoh T,Borok M,Chok

    更新日期:2020-03-01 00:00:00

  • MLL/AF10(OM-LZ)-immortalized cells expressed cytokines and induced host cell proliferation in a mouse bone marrow transplantation model.

    abstract::Several mouse models studying the MLL fusion-induced leukemic transformation showed that a myeloproliferation stage precedes leukemia or occurred as the only phenotype of hematological disorder in mice. We established 6 MLL/AF10(OM-LZ)-immortalized cell lines by retrovirally transducing the fusion gene into bone marro...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.24867

    authors: Fu JF,Hsu CL,Shih LY

    更新日期:2010-04-01 00:00:00

  • Genome structure-based screening identified epigenetically silenced microRNA associated with invasiveness in non-small-cell lung cancer.

    abstract::MicroRNA (miRNA) expression is frequently altered in human cancers. To search for epigenetically silenced miRNAs in non-small-cell lung cancer (NSCLC), we mapped human miRNAs on autosomal chromosomes and selected 55 miRNAs in silico. We treated six NSCLC cell lines with the DNA methylation inhibitor 5-aza-2'-deoxycyti...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.26254

    authors: Watanabe K,Emoto N,Hamano E,Sunohara M,Kawakami M,Kage H,Kitano K,Nakajima J,Goto A,Fukayama M,Nagase T,Yatomi Y,Ohishi N,Takai D

    更新日期:2012-06-01 00:00:00

  • Expression of neuronal src mRNA as a favorable marker and inverse correlation to N-myc gene amplification in human neuroblastomas.

    abstract::Neuron-specific src mRNA, which is expressed in human brain tissue by alternative splicing, is associated with neural differentiation. Neuronal c-srcNI expression may be associated with the ability of neuroblastomas to mature; furthermore, c-srcN2 mRNA is induced in chemically differentiated neuroblastoma cells in vit...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.2910580607

    authors: Matsunaga T,Shirasawa H,Tanabe M,Ohnuma N,Kawamura K,Etoh T,Takahashi H,Simizu B

    更新日期:1994-09-15 00:00:00

  • Synthesis and antitumor properties of selenocoxib-1 against rat prostate adenocarcinoma cells.

    abstract::Hormone refractory prostate cancer poses a huge problem and standard of care chemotherapy has not been very successful. We used a novel strategy to combine properties of 2 well-studied class of compounds (selenium and COX-2 inhibitor) and examined the resulting effectiveness against prostate cancer. Bearing in mind th...

    journal_title:International journal of cancer

    pub_type: 杂志文章

    doi:10.1002/ijc.25033

    authors: Desai D,Sinha I,Null K,Wolter W,Suckow MA,King T,Amin S,Sinha R

    更新日期:2010-07-01 00:00:00