Inositol Polyphosphate Multikinase (IPMK), a Gene Coding for a Potential Moonlighting Protein, Contributes to Human Female Longevity.

Abstract:

:Biogerontological research highlighted a complex and dynamic connection between aging, health and longevity, partially determined by genetic factors. Multifunctional proteins with moonlighting features, by integrating different cellular activities in the space and time, may explain part of this complexity. Inositol Polyphosphate Multikinase (IPMK) is a potential moonlighting protein performing multiple unrelated functions. Initially identified as a key enzyme for inositol phosphates synthesis, small messengers regulating many aspects of cell physiology, IPMK is now implicated in a number of metabolic pathways affecting the aging process. IPMK regulates basic transcription, telomere homeostasis, nutrient-sensing, metabolism and oxidative stress. Here, we tested the hypothesis that the genetic variability of IPMK may affect human longevity. Single-SNP (single nuclear polymorphism), haplotype-based association tests as well as survival analysis pointed to the relevance of six out of fourteen genotyped SNPs for female longevity. In particular, haplotype analysis refined the association highlighting two SNPs, rs2790234 and rs6481383, as major contributing variants for longevity in women. Our work, the first to investigate the association between variants of IPMK and longevity, supports IPMK as a novel gender-specific genetic determinant of human longevity, playing a role in the complex network of genetic factors involved in human survival.

journal_name

Genes (Basel)

journal_title

Genes

authors

De Rango F,Crocco P,Iannone F,Saiardi A,Passarino G,Dato S,Rose G

doi

10.3390/genes10020125

subject

Has Abstract

pub_date

2019-02-08 00:00:00

issue

2

issn

2073-4425

pii

genes10020125

journal_volume

10

pub_type

杂志文章

相关文献

Genes文献大全
  • Further Insights into the Architecture of the PN Promoter That Controls the Expression of the bzd Genes in Azoarcus.

    abstract::The anaerobic degradation of benzoate in bacteria involves the benzoyl-CoA central pathway. Azoarcus/Aromatoleum strains are a major group of anaerobic benzoate degraders, and the transcriptional regulation of the bzd genes was extensively studied in Azoarcus sp. CIB. In this work, we show that the bzdR regulatory gen...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10070489

    authors: Durante-Rodríguez G,Gutiérrez-Del-Arroyo P,Vélez M,Díaz E,Carmona M

    更新日期:2019-06-27 00:00:00

  • Genomic Selection for Optimum Index with Dry Biomass Yield, Dry Mass Fraction of Fresh Material, and Plant Height in Biomass Sorghum.

    abstract::Sorghum is one of the world's major crops, expresses traits for resilience to climate change, and can be used for several purposes including food and clean fuels. Multiple-trait genomic prediction and selection models were implemented using genotyping-by-sequencing single nucleotide polymorphism markers and phenotypic...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010061

    authors: Habyarimana E,Lopez-Cruz M,Baloch FS

    更新日期:2020-01-05 00:00:00

  • Protein Changes in Response to Lead Stress of Lead-Tolerant and Lead-Sensitive Industrial Hemp Using SWATH Technology.

    abstract::Hemp is a Pb-tolerant and Pb-accumulating plant and the study of its tolerance mechanisms could facilitate the breeding of hemp with enhanced Pb tolerance and accumulation. In the present study, we took advantage of sequential window acquisition of all theoretical mass spectra (SWATH) technology to study the differenc...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050396

    authors: Xia C,Hong L,Yang Y,Yanping X,Xing H,Gang D

    更新日期:2019-05-22 00:00:00

  • The POU Transcription Factor POU-M2 Regulates Vitellogenin Receptor Gene Expression in the Silkworm, Bombyx mori.

    abstract::Vitellogenin receptors (VgRs) play critical roles in egg formation by transporting vitellogenin (Vg) into oocytes in insects. Although the function of VgR in insects is well studied, the transcriptional regulation of this gene is still unclear. Here, we cloned the promoter of the VgR gene from Bombyx mori (BmVgR), and...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11040394

    authors: Shen G,Chen E,Ji X,Liu L,Liu J,Hua X,Li D,Xiao Y,Xia Q

    更新日期:2020-04-06 00:00:00

  • Transcriptional Basis for Differential Thermosensitivity of Seedlings of Various Tomato Genotypes.

    abstract::Transcriptional reprograming after the exposure of plants to elevated temperatures is a hallmark of stress response which is required for the manifestation of thermotolerance. Central transcription factors regulate the stress survival and recovery mechanisms and many of the core responses controlled by these factors a...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11060655

    authors: Hu Y,Fragkostefanakis S,Schleiff E,Simm S

    更新日期:2020-06-16 00:00:00

  • Identification of an Embryonic Cell-Specific Region within the Pineapple SERK1 Promoter.

    abstract::Plant tissue culture methods, such as somatic embryogenesis, are attractive alternatives to traditional breeding methods for plant propagation. However, they often suffer from limited efficiency. Somatic embryogenesis receptor kinase (SERK)1 is a marker gene of early somatic embryogenesis in several plants, including ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10110883

    authors: Luan A,He Y,Xie T,Chen C,Mao Q,Wang X,Li C,Ding Y,Lin W,Liu C,Xia J,He J

    更新日期:2019-11-01 00:00:00

  • Comparison of the fecal microbiota in feral and domestic goats.

    abstract::Animals have co-evolved with mutualistic microbial communities, known as the microbiota, which are essential for organ development and function. We hypothesize that modern animal husbandry practices exert an impact on the intestinal microbiota. In this study, we compared the structure of the fecal microbiota between f...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes3010001

    authors: De Jesús-Laboy KM,Godoy-Vitorino F,Piceno YM,Tom LM,Pantoja-Feliciano IG,Rivera-Rivera MJ,Andersen GL,Domínguez-Bello MG

    更新日期:2011-12-21 00:00:00

  • Evaluation of DNA Extraction Methods Developed for Forensic and Ancient DNA Applications Using Bone Samples of Different Age.

    abstract::The efficient extraction of DNA from challenging samples, such as bones, is critical for the success of downstream genotyping analysis in molecular genetic disciplines. Even though the ancient DNA community has developed several protocols targeting small DNA fragments that are typically present in decomposed or old sp...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes12020146

    authors: Xavier C,Eduardoff M,Bertoglio B,Amory C,Berger C,Casas-Vargas A,Pallua J,Parson W

    更新日期:2021-01-22 00:00:00

  • High-Throughput Incubation and Quantification of Agglutination Assays in a Microfluidic System.

    abstract::In this paper, we present a two-phase microfluidic system capable of incubating and quantifying microbead-based agglutination assays. The microfluidic system is based on a simple fabrication solution, which requires only laboratory tubing filled with carrier oil, driven by negative pressure using a syringe pump. We pr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9060281

    authors: Castro D,Conchouso D,Kodzius R,Arevalo A,Foulds IG

    更新日期:2018-06-04 00:00:00

  • The Complete Genome of an Endogenous Nimavirus (Nimav-1_LVa) From the Pacific Whiteleg Shrimp Penaeus (Litopenaeus) Vannamei.

    abstract::White spot syndrome virus (WSSV), the lone virus of the genus Whispovirus under the family Nimaviridae, is one of the most devastating viruses affecting the shrimp farming industry. Knowledge about this virus, in particular, its evolution history, has been limited, partly due to its large genome and the lack of other ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010094

    authors: Bao W,Tang KFJ,Alcivar-Warren A

    更新日期:2020-01-14 00:00:00

  • The Plasticizer Bisphenol A Perturbs the Hepatic Epigenome: A Systems Level Analysis of the miRNome.

    abstract::Ubiquitous exposure to bisphenol A (BPA), an endocrine disruptor (ED), has raised concerns for both human and ecosystem health. Epigenetic factors, including microRNAs (miRNAs), are key regulators of gene expression during cancer. The effect of BPA exposure on the zebrafish epigenome remains poorly characterized. Zebr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8100269

    authors: Renaud L,Silveira WAD,Hazard ES,Simpson J,Falcinelli S,Chung D,Carnevali O,Hardiman G

    更新日期:2017-10-13 00:00:00

  • An Introduction to Systems Analytics and Integration of Big Omics Data.

    abstract::A major technological shift in the research community in the past decade has been the adoption of high throughput (HT) technologies to interrogate the genome, epigenome, transcriptome, and proteome in a massively parallel fashion [...]. ...

    journal_title:Genes

    pub_type: 社论

    doi:10.3390/genes11030245

    authors: Hardiman G

    更新日期:2020-02-26 00:00:00

  • Analyses of Hybrid Viability across a Hybrid Zone between Two Alnus Species Using Microsatellites and cpDNA Markers.

    abstract::Diploid Alnus glutinosa s. str. and autotetraploid A. rohlenae form a narrow hybrid zone in a study area in southern Serbia, which results in triploid hybrid formation. The vast majority of previous studies have been focused on studies of maternal plants, but the offspring resulting from their crossing have not been m...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11070770

    authors: Šmíd J,Douda J,Krak K,Mandák B

    更新日期:2020-07-09 00:00:00

  • The Role of Salmonella Genomic Island 4 in Metal Tolerance of Salmonella enterica Serovar I 4,[5],12:i:- Pork Outbreak Isolate USDA15WA-1.

    abstract::Multidrug-resistant (MDR; resistance to >3 antimicrobial classes) Salmonella enterica serovar I 4,[5],12:i:- strains were linked to a 2015 foodborne outbreak from pork. Strain USDA15WA-1, associated with the outbreak, harbors an MDR module and the metal tolerance element Salmonella Genomic Island 4 (SGI-4). Characteri...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111291

    authors: Bearson BL,Trachsel JM,Shippy DC,Sivasankaran SK,Kerr BJ,Loving CL,Brunelle BW,Curry SM,Gabler NK,Bearson SMD

    更新日期:2020-10-30 00:00:00

  • Expanding the Clinical and Mutational Spectrum of Recessive AEBP1-Related Classical-Like Ehlers-Danlos Syndrome.

    abstract::Ehlers-Danlos syndrome (EDS) comprises clinically heterogeneous connective tissue disorders with diverse molecular etiologies. The 2017 International Classification for EDS recognized 13 distinct subtypes caused by pathogenic variants in 19 genes mainly encoding fibrillar collagens and collagen-modifying or processing...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10020135

    authors: Ritelli M,Cinquina V,Venturini M,Pezzaioli L,Formenti AM,Chiarelli N,Colombi M

    更新日期:2019-02-12 00:00:00

  • Sequence Composition Underlying Centromeric and Heterochromatic Genome Compartments of the Pacific Oyster Crassostrea gigas.

    abstract::Segments of the genome enriched in repetitive sequences still present a challenge and are omitted in genome assemblies. For that reason, the exact composition of DNA sequences underlying the heterochromatic regions and the active centromeres are still unexplored for many organisms. The centromere is a crucial region o...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11060695

    authors: Tunjić Cvitanić M,Vojvoda Zeljko T,Pasantes JJ,García-Souto D,Gržan T,Despot-Slade E,Plohl M,Šatović E

    更新日期:2020-06-24 00:00:00

  • Multi-Tissue Transcriptomes Yield Information on High-Altitude Adaptation and Sex-Determination in Scutiger cf. sikimmensis.

    abstract::The Himalayas are one of earth's hotspots of biodiversity. Among its many cryptic and undiscovered organisms, including vertebrates, this complex high-mountain ecosystem is expected to harbour many species with adaptations to life in high altitudes. However, modern evolutionary genomic studies in Himalayan vertebrates...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10110873

    authors: Hofmann S,Kuhl H,Baniya CB,Stöck M

    更新日期:2019-10-31 00:00:00

  • AMPD1 C34T Polymorphism (rs17602729) Is Not Associated with Post-Exercise Changes of Body Weight, Body Composition, and Biochemical Parameters in Caucasian Females.

    abstract::Background: The C34T polymorphism (rs 17602729) in adenosine monophosphate deaminase 1 gene (AMPD1) is associated with muscular energy metabolism in exercise. However, the role of its potential modifying impact on exercise-induced changes in obesity related parameters is unknown. The aim of the study was to determine ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11050558

    authors: Leońska-Duniec A,Maculewicz E,Humińska-Lisowska K,Maciejewska-Skrendo A,Leźnicka K,Cięszczyk P,Sawczuk M,Trybek G,Wilk M,Lepionka W,Ficek K

    更新日期:2020-05-16 00:00:00

  • Coordinated Dialogue between UHRF1 and DNMT1 to Ensure Faithful Inheritance of Methylated DNA Patterns.

    abstract::DNA methylation, catalyzed by DNA methyltransferases (DNMTs), is an epigenetic mark that needs to be faithfully replicated during mitosis in order to maintain cell phenotype during successive cell divisions. This epigenetic mark is located on the 5'-carbon of the cytosine mainly within cytosine⁻phosphate⁻guanine (CpG)...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes10010065

    authors: Bronner C,Alhosin M,Hamiche A,Mousli M

    更新日期:2019-01-18 00:00:00

  • Identification of Candidate Genes for Seed Glucosinolate Content Using Association Mapping in Brassica napus L.

    abstract::Rapeseed contains glucosinolates, a toxic group of sulfur-containing glucosides, which play critical roles in defense against herbivores and microbes. However, the presence of glucosinolates in rapeseed reduces the value of the meal as feed for livestock. We performed association mapping of seed glucosinolate (GS) con...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes6041215

    authors: Qu CM,Li SM,Duan XJ,Fan JH,Jia LD,Zhao HY,Lu K,Li JN,Xu XF,Wang R

    更新日期:2015-11-18 00:00:00

  • Novel Mutations in CLPP, LARS2, CDH23, and COL4A5 Identified in Familial Cases of Prelingual Hearing Loss.

    abstract::We report the underlying genetic causes of prelingual hearing loss (HL) segregating in eight large consanguineous families, ascertained from the Punjab province of Pakistan. Exome sequencing followed by segregation analysis revealed seven potentially pathogenic variants, including four novel alleles c.257G>A, c.6083A>...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11090978

    authors: Zafar S,Shahzad M,Ishaq R,Yousaf A,Shaikh RS,Akram J,Ahmed ZM,Riazuddin S

    更新日期:2020-08-22 00:00:00

  • The Genome of the North American Brown Bear or Grizzly: Ursus arctos ssp. horribilis.

    abstract::The grizzly bear (Ursus arctos ssp. horribilis) represents the largest population of brown bears in North America. Its genome was sequenced using a microfluidic partitioning library construction technique, and these data were supplemented with sequencing from a nanopore-based long read platform. The final assembly was...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9120598

    authors: Taylor GA,Kirk H,Coombe L,Jackman SD,Chu J,Tse K,Cheng D,Chuah E,Pandoh P,Carlsen R,Zhao Y,Mungall AJ,Moore R,Birol I,Franke M,Marra MA,Dutton C,Jones SJM

    更新日期:2018-11-30 00:00:00

  • Alternative Splicing in the Hippo Pathway-Implications for Disease and Potential Therapeutic Targets.

    abstract::Alternative splicing is a well-studied gene regulatory mechanism that produces biological diversity by allowing the production of multiple protein isoforms from a single gene. An involvement of alternative splicing in the key biological signalling Hippo pathway is emerging and offers new therapeutic avenues. This revi...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes9030161

    authors: Porazinski S,Ladomery M

    更新日期:2018-03-13 00:00:00

  • Beyond junk-variable tandem repeats as facilitators of rapid evolution of regulatory and coding sequences.

    abstract::Copy Number Variations (CNVs) and Single Nucleotide Polymorphisms (SNPs) have been the major focus of most large-scale comparative genomics studies to date. Here, we discuss a third, largely ignored, type of genetic variation, namely changes in tandem repeat number. Historically, tandem repeats have been designated as...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes3030461

    authors: Gemayel R,Cho J,Boeynaems S,Verstrepen KJ

    更新日期:2012-07-26 00:00:00

  • Ancient Ancestry Informative Markers for Identifying Fine-Scale Ancient Population Structure in Eurasians.

    abstract::The rapid accumulation of ancient human genomes from various areas and time periods potentially enables the expansion of studies of biodiversity, biogeography, forensics, population history, and epidemiology into past populations. However, most ancient DNA (aDNA) data were generated through microarrays designed for mo...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9120625

    authors: Esposito U,Das R,Syed S,Pirooznia M,Elhaik E

    更新日期:2018-12-12 00:00:00

  • Distribution of the Warmblood Fragile Foal Syndrome Type 1 Mutation (PLOD1 c.2032G>A) in Different Horse Breeds from Europe and the United States.

    abstract::Warmblood fragile foal syndrome (WFFS) is an autosomal recessive disorder caused by a single nucleotide variant in the procollagen-lysine-2-oxoglutarate-5-dioxygenase 1 gene (PLOD1:c.2032G>A, p.Gly678Arg). Homozygosity for the PLOD1 variant causes an Ehler-Danlos-like syndrome, which has to date only been reported in ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11121518

    authors: Reiter S,Wallner B,Brem G,Haring E,Hoelzle L,Stefaniuk-Szmukier M,Długosz B,Piórkowska K,Ropka-Molik K,Malvick J,Penedo MCT,Bellone RR

    更新日期:2020-12-18 00:00:00

  • DNA Methylation Profiling of Human Prefrontal Cortex Neurons in Heroin Users Shows Significant Difference between Genomic Contexts of Hyper- and Hypomethylation and a Younger Epigenetic Age.

    abstract::We employed Illumina 450 K Infinium microarrays to profile DNA methylation (DNAm) in neuronal nuclei separated by fluorescence-activated sorting from the postmortem orbitofrontal cortex (OFC) of heroin users who died from heroin overdose (N = 37), suicide completers (N = 22) with no evidence of heroin use and from con...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8060152

    authors: Kozlenkov A,Jaffe AE,Timashpolsky A,Apontes P,Rudchenko S,Barbu M,Byne W,Hurd YL,Horvath S,Dracheva S

    更新日期:2017-05-30 00:00:00

  • The Chloroplast Genome Sequence of Scutellaria baicalensis Provides Insight into Intraspecific and Interspecific Chloroplast Genome Diversity in Scutellaria.

    abstract::Scutellaria baicalensis Georgi (Lamiaceae) is the source of the well-known traditional Chinese medicine "HuangQin" (Radix Scutellariae). Natural sources of S. baicalensis are rapidly declining due to high market demand and overexploitation. Moreover, the commercial products of Radix Scutellariae have often been found ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8090227

    authors: Jiang D,Zhao Z,Zhang T,Zhong W,Liu C,Yuan Q,Huang L

    更新日期:2017-09-13 00:00:00

  • Cortical Granule Distribution and Expression Pattern of Genes Regulating Cellular Component Size, Morphogenesis, and Potential to Differentiation are Related to Oocyte Developmental Competence and Maturational Capacity In Vivo and In Vitro.

    abstract::Polyspermia is an adverse phenomenon during mammalian fertilization when more than one sperm fuses with a single oocyte. The egg cell is prepared to prevent polyspermia by, among other ways, producing cortical granules (CGs), which are specialized intracellular structures containing enzymes that aim to harden the zona...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11070815

    authors: Kulus M,Kranc W,Jeseta M,Sujka-Kordowska P,Konwerska A,Ciesiółka S,Celichowski P,Moncrieff L,Kocherova I,Józkowiak M,Kulus J,Wieczorkiewicz M,Piotrowska-Kempisty H,Skowroński MT,Bukowska D,Machatkova M,Hanulakova S,Mozd

    更新日期:2020-07-17 00:00:00

  • MiRAR-miRNA Activity Reporter for Living Cells.

    abstract::microRNA (miRNA) activity and regulation are of increasing interest as new therapeutic targets. Traditional approaches to assess miRNA levels in cells rely on RNA sequencing or quantitative PCR. While useful, these approaches are based on RNA extraction and cannot be applied in real-time to observe miRNA activity with...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9060305

    authors: Turk MA,Chung CZ,Manni E,Zukowski SA,Engineer A,Badakhshi Y,Bi Y,Heinemann IU

    更新日期:2018-06-19 00:00:00