Signatures of selection in the human antibody repertoire: Selective sweeps, competing subclones, and neutral drift.

abstract：:Lineage specification is thought to be largely regulated at the level of transcription, where lineage-specific transcription factors drive specific cell fates. MicroRNAs (miR), vital to many cell functions, act posttranscriptionally to decrease the expression of target mRNAs. MLL-AF4 acute lymphocytic leukemia exhibit...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Okuyama K,Ikawa T,Gentner B,Hozumi K,Harnprasopwat R,Lu J,Yamashita R,Ha D,Toyoshima T,Chanda B,Kawamata T,Yokoyama K,Wang S,Ando K,Lodish HF,Tojo A,Kawamoto H,Kotani A

更新日期：2013-08-13 00:00:00

abstract：:The neural mechanisms used by the human brain to identify phonemes remain unclear. We recorded the EEG signals evoked by repeated presentation of 12 American English phonemes. A support vector machine model correctly recognized a high percentage of the EEG brain wave recordings represented by their phases, which were ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wang R,Perreau-Guimaraes M,Carvalhaes C,Suppes P

更新日期：2012-12-11 00:00:00

abstract：:The anticancer peptide PNC-27, which contains an HDM-2-binding domain corresponding to residues 12-26 of p53 and a transmembrane-penetrating domain, has been found to kill cancer cells (but not normal cells) by inducing membranolysis. We find that our previously determined 3D structure of the p53 residues of PNC-27 is...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sarafraz-Yazdi E,Bowne WB,Adler V,Sookraj KA,Wu V,Shteyler V,Patel H,Oxbury W,Brandt-Rauf P,Zenilman ME,Michl J,Pincus MR

更新日期：2010-02-02 00:00:00

abstract：:The proliferating cell nuclear antigen (PCNA) acts as a processivity factor for replicative DNA polymerases and is essential for DNA replication. In vitro studies have suggested a role for PCNA-in the repair synthesis step of nucleotide excision repair, and PCNA interacts with the cyclin-dependent kinase inhibitor p21...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Torres-Ramos CA,Yoder BL,Burgers PM,Prakash S,Prakash L

更新日期：1996-09-03 00:00:00

abstract：:Voltage-gated Na channels in several classes of neurons, including cells of the cerebellum, are subject to an open-channel block and unblock by an endogenous protein. The Na(V)beta4 (Scn4b) subunit is a candidate blocking protein because a free peptide from its cytoplasmic tail, the beta4 peptide, can block open Na ch...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bant JS,Raman IM

更新日期：2010-07-06 00:00:00

abstract：:In this study we examine how the introduction of a reference lottery with nonrandom outcomes alters the way in which choices among pairs of lotteries are made, even if it does not alter the choices. We use different domains (some of the lotteries produce gains, other losses) and different contexts (one member of the p...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Dickhaut J,McCabe K,Nagode JC,Rustichini A,Smith K,Pardo JV

更新日期：2003-03-18 00:00:00

abstract：:One of the defining trends of the Holocene has been the emergence of complex societies. Two essential features of complex societies are intensive resource use and sociopolitical hierarchy. Although it is widely agreed that these two phenomena are associated cross-culturally and have both contributed to the rise of com...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sheehan O,Watts J,Gray RD,Atkinson QD

更新日期：2018-04-03 00:00:00

abstract：:One of the advantages of the production of monoclonal antibodies by tissue culture methods is that they can be internally labeled by using appropriate radioactive amino acid in the culture fluid. Thus, radioactive immunological probes of high specific activity can be prepared. Here we report applications of these inte...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cuello AC,Priestley JV,Milstein C

更新日期：1982-01-01 00:00:00

abstract：:Broken-cell preparations of Salmonella typhimurium rapidly incorporated 75Se from 75SeO3(2-) into tRNA by an ATP-dependent process. Selenium incorporation in the presence of 50 microM 75SeO3(2-) (0.8-1 pmol per A260 unit) was enhanced by the selenocysteine precursor, O-acetyl-L-serine (to 3.7 pmol per A260 unit). This...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Veres Z,Tsai L,Politino M,Stadtman TC

更新日期：1990-08-01 00:00:00

abstract：:The lactate racemase enzyme (LarA) of Lactobacillus plantarum harbors a (SCS)Ni(II) pincer complex derived from nicotinic acid. Synthesis of the enzyme-bound cofactor requires LarB, LarC, and LarE, which are widely distributed in microorganisms. The functions of the accessory proteins are unknown, but the LarB C termi...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Desguin B,Soumillion P,Hols P,Hausinger RP

更新日期：2016-05-17 00:00:00

abstract：:The Hsp90 chaperone buffers development against a wide range of morphological changes in many organisms and in Drosophila masks the effects of hidden genetic variation. Theory predicts that genetic and nongenetic buffering will share common mechanisms. For example, it is argued that Hsp90 genetic buffering evolved sol...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Milton CC,Huynh B,Batterham P,Rutherford SL,Hoffmann AA

更新日期：2003-11-11 00:00:00

abstract：:Complex social behavior in Microtus voles and other mammals has been postulated to be under the direct genetic control of a single locus: the arginine vasopressin 1a receptor (avpr1a) gene. Using a phylogenetic approach, we show that a repetitive element in the promoter region of avpr1a, which reportedly causes social...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Fink S,Excoffier L,Heckel G

更新日期：2006-07-18 00:00:00

abstract：:The ability of bacteria to regulate gene expression in response to changes in cell density is termed quorum sensing. This behavior involves the synthesis and recognition of extracellular, hormone-like compounds known as autoinducers. Here we report the structure of an autoinducer synthase, LuxS from Bacillus subtilis,...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hilgers MT,Ludwig ML

更新日期：2001-09-25 00:00:00

abstract：:The cochlear implant (CI) is a neuroprosthesis that allows profoundly deaf patients to recover speech intelligibility. This recovery goes through long-term adaptative processes to build coherent percepts from the coarse information delivered by the implant. Here we analyzed the longitudinal postimplantation evolution ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rouger J,Lagleyre S,Fraysse B,Deneve S,Deguine O,Barone P

更新日期：2007-04-24 00:00:00

abstract：:Astronomers and physicists noticed centuries ago that visual spatial resolution is higher for dark than light stimuli, but the neuronal mechanisms for this perceptual asymmetry remain unknown. Here we demonstrate that the asymmetry is caused by a neuronal nonlinearity in the early visual pathway. We show that neurons ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kremkow J,Jin J,Komban SJ,Wang Y,Lashgari R,Li X,Jansen M,Zaidi Q,Alonso JM

更新日期：2014-02-25 00:00:00

abstract：:Clones of embryonic chick chondrocytes have been isolated and collagen biosynthesis has been followed as the clones grow and eventually lose division capacity. Analysis of collagen type at each successive subculture until the time of cellular senescence has shown that a change in synthesis occurs from the cartilage-sp...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mayne R,Vail MS,Mayne PM,Miller EJ

更新日期：1976-05-01 00:00:00

abstract：:To initiate fertilization, mouse sperm bind to Ser- (O-) linked oligosaccharides located at the sperm combining site of zona pellucida glycoprotein mZP3. Apparently, the oligosaccharides are present on one or more of five Ser residues clustered in the carboxyl-terminal region of the mZP3 polypeptide. Here, each of the...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Chen J,Litscher ES,Wassarman PM

更新日期：1998-05-26 00:00:00

abstract：:Ventricular fibrillation is the leading cause of sudden cardiac death. In fibrillation, fragmented electrical waves meander erratically through the heart muscle, creating disordered and ineffective contraction. Theoretical and computer studies, as well as recent experimental evidence, have suggested that fibrillation ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Garfinkel A,Kim YH,Voroshilovsky O,Qu Z,Kil JR,Lee MH,Karagueuzian HS,Weiss JN,Chen PS

更新日期：2000-05-23 00:00:00

abstract：:The ATP-binding cassette (ABC) transporter of mitochondria (Atm1) mediates iron homeostasis in eukaryotes, while the prokaryotic homolog from Novosphingobium aromaticivorans (NaAtm1) can export glutathione derivatives and confer protection against heavy-metal toxicity. To establish the structural framework underlying ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Fan C,Kaiser JT,Rees DC

更新日期：2020-08-11 00:00:00

abstract：:Although the binding change mechanism of rotary catalysis by which F1-ATPase hydrolyzes ATP has been supported by equilibrium, kinetic, and structural observations, many questions concerning the function remain unanswered. Because of the importance of this enzyme, the search for a full understanding of its mechanism i...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Gao YQ,Yang W,Marcus RA,Karplus M

更新日期：2003-09-30 00:00:00

abstract：:Left ventricular remodeling that occurs after myocardial infarction (MI) and pressure overload is generally accepted as a determinant of the clinical course of heart failure. The molecular mechanism of this process, however, remains to be elucidated. Apoptosis signal-regulating kinase 1 (ASK1) is a mitogen-activated p...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yamaguchi O,Higuchi Y,Hirotani S,Kashiwase K,Nakayama H,Hikoso S,Takeda T,Watanabe T,Asahi M,Taniike M,Matsumura Y,Tsujimoto I,Hongo K,Kusakari Y,Kurihara S,Nishida K,Ichijo H,Hori M,Otsu K

更新日期：2003-12-23 00:00:00

abstract：:Studies of phage lambda in vivo have indicated that its own recombination enzymes, beta protein and lambda exonuclease, are capable of catalyzing two dissimilar pathways of homologous recombination that are widely distributed in nature: single-strand annealing and strand invasion. The former is an enzymatic splicing o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rybalchenko N,Golub EI,Bi B,Radding CM

更新日期：2004-12-07 00:00:00

abstract：:Antibodies prepared against peptides CP2, CP4, and CP5, which occur within the first 1522 amino acid residues of the alpha 1 subunit of dihydropyridine-sensitive skeletal muscle calcium channels, specifically recognized a 175-kDa form of the alpha 1 subunit in immunoblots and immunoprecipitation experiments. In contra...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： De Jongh KS,Merrick DK,Catterall WA

更新日期：1989-11-01 00:00:00

abstract：:Vertebrate primary cilium is a Hedgehog signaling center but the extent of its involvement in other signaling systems is less well understood. This report delineates a mechanism by which fibroblast growth factor (FGF) controls primary cilia. Employing proteomic approaches to characterize proteins associated with the F...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kunova Bosakova M,Nita A,Gregor T,Varecha M,Gudernova I,Fafilek B,Barta T,Basheer N,Abraham SP,Balek L,Tomanova M,Fialova Kucerova J,Bosak J,Potesil D,Zieba J,Song J,Konik P,Park S,Duran I,Zdrahal Z,Smajs D,Jans

更新日期：2019-03-05 00:00:00

abstract：:P elements have been cloned and sequenced from Drosophila nebulosa. Their sequences have diverged less than 6% from P elements of Drosophila melanogaster. However D. nebulosa P elements have nucleotide changes that close all four open reading frames found in the D. melanogaster P element. Microinjection experiments sh...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lansman RA,Shade RO,Grigliatti TA,Brock HW

更新日期：1987-09-01 00:00:00

abstract：:Vesicular stomatitis virus (VSV) exhibits a remarkably robust and pantropic infectivity, mediated by its coat protein, VSV-G. Using this property, recombinant forms of VSV and VSV-G-pseudotyped viral vectors are being developed for gene therapy, vaccination, and viral oncolysis and are extensively used for gene transd...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Finkelshtein D,Werman A,Novick D,Barak S,Rubinstein M

更新日期：2013-04-30 00:00:00

abstract：:Ubiquitin C-terminal hydrolase L1 (UCH-L1) is one of the most abundant and enigmatic enzymes of the CNS. Based on existing UCH-L1 knockout models, UCH-L1 is thought to be required for the maintenance of axonal integrity, but not for neuronal development despite its high expression in neurons. Several lines of evidence...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Reinicke AT,Laban K,Sachs M,Kraus V,Walden M,Damme M,Sachs W,Reichelt J,Schweizer M,Janiesch PC,Duncan KE,Saftig P,Rinschen MM,Morellini F,Meyer-Schwesinger C

更新日期：2019-04-16 00:00:00

abstract：:In cat retina, antisera directed against tyrosine hydroxylase (tyrosine 3-monooxygenase; EC 1.14.16.2) labeled three morphologically distinct classes of neurons; amacrine cells, displaced amacrine cells, and interplexiform cells. These three cell populations differed not only in their morphologies but also in their nu...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Oyster CW,Takahashi ES,Cilluffo M,Brecha NC

更新日期：1985-09-01 00:00:00

abstract：:The "chlamydial anomaly," first coined by James Moulder, describes the inability of researchers to detect or purify peptidoglycan (PG) from pathogenic Chlamydiae despite genetic and biochemical evidence and antibiotic susceptibility data that suggest its existence. We recently detected PG in Chlamydia trachomatis by a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Packiam M,Weinrick B,Jacobs WR Jr,Maurelli AT

更新日期：2015-09-15 00:00:00

abstract：:The in vivo biological activities of IgG antibodies result from their bifunctional nature, in which antigen recognition by the Fab is coupled to the effector and immunomodulatory diversity found in the Fc domain. This diversity, resulting from both amino acid and glycan heterogeneity, is translated into cellular respo...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Smith P,DiLillo DJ,Bournazos S,Li F,Ravetch JV

更新日期：2012-04-17 00:00:00