Abstract:
:Superoxide dismutases (SODs) play important roles in plant growth, development, and response to abiotic stresses. Despite SOD gene families have been identified in various plant species, little is known in foxtail millet (Setaria italica L.). In this study, a systematic analysis of SOD gene family was performed in foxtail millet and the expression pattern of SOD genes in response to abiotic stressors was analyzed at the whole-genomic level. Eight SOD genes were identified in foxtail millet, including 4 Cu/ZnSODs, 3 FeSODs, and 1 MnSOD. These SiSODs are unevenly distributed across 5 of the 9 chromosomes. Phylogenetic analysis showed that SOD proteins could be divided into two major categories (Cu/ZnSODs and Fe-MnSODs), containing seven subgroups, from foxtail millet and other plant species. SOD genes have conserved motif and exon/intron composition in the same subgroup among Setaria italica, Setaria viridis, and Oryza sativa. Additionally, many cis-elements that respond to different stressors were distributed at different densities in the promoters of 8 SiSODs. The expression patterns of SiSODs in different tissues and different abiotic stressors indicated that the SiSODs may play important roles in reactive oxygen species scavenging, caused by various stressors in foxtail millet. This study provides a foundation for the further cloning and functional verification of the SOD gene family response to environmental stimuli in foxtail millet.
journal_name
3 Biotechjournal_title
3 Biotechauthors
Wang T,Song H,Zhang B,Lu Q,Liu Z,Zhang S,Guo R,Wang C,Zhao Z,Liu J,Peng Rdoi
10.1007/s13205-018-1502-xsubject
Has Abstractpub_date
2018-12-01 00:00:00pages
486issue
12eissn
2190-572Xissn
2190-5738pii
1502journal_volume
8pub_type
杂志文章相关文献
3 Biotech文献大全abstract::Infectious diseases caused by antimicrobial-resistant microbes (ARMs) and the treatment are the serious problems in the field of medical science today world over. The development of alternative drug line to treat such infectious diseases is urgently required. Researches on ARMs revealed the presence of membrane protei...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-013-0180-y
更新日期:2014-10-01 00:00:00
abstract::Cytoplasmic male sterility (CMS) plays an important role in the production of soybean hybrid seeds. MicroRNAs (miRNAs) are a class of non-coding endogenous ~ 21 nt small RNAs that play crucial roles in flower and pollen development by targeting genes in plants. To dissect the function of miRNAs in soybean CMS, a total...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-018-1543-1
更新日期:2019-01-01 00:00:00
abstract::Chlamydomonas sp. ICE-L, which can thrive in extreme environments of the Antarctic, could represent a promising alternative for polyunsaturated fatty acid (PUFA) production. A new Δ12-fatty acid desaturase (FAD)-encoding gene (Δ 12 CiFAD), 1269 bp in size, was cloned from Ch...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-019-1858-6
更新日期:2019-09-01 00:00:00
abstract::Hyaluronic acid (HA) is a biopolymer used in several industries. There is increasing global demand. HA is normally produced on a large scale using attenuated strains of group C streptococci that are pathogenic and fastidious. Accordingly, it is of interest to use a "generally recognized as safe" (GRAS) organism such a...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-019-1749-x
更新日期:2019-06-01 00:00:00
abstract::Statistical methodologies, including Plackett-Burman design and Box-Behnken design, were employed to optimize the fermentation conditions for the production of active substances against aquatic pathogen Vibrio harveyi by marine-derived Aspergillus flavipes strain HN4-13. The optimal crucial fermentation values for max...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-017-1015-z
更新日期:2017-12-01 00:00:00
abstract::Plant growth-promoting fungi play an important role in development of sustainable agriculture. In the current study, 13 fungal strains were isolated from the rhizosphere of healthy Triticum aestivum (wheat) plant and screened for their indolic auxin production potential. Aspergillus flavus strain PGFW, Aspergillus nig...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-018-1428-3
更新日期:2018-10-01 00:00:00
abstract::Kalopanax septemlobus is a medicinal woody species of the family Araliaceae, and the pharmaceutical properties of saponins obtained from K. septemlobus suggest that K. septemlobus has the potential to be a crude drug and dietary health supplement. In this study, we established cell suspension culture of K. septemlobus...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-018-1090-9
更新日期:2018-01-01 00:00:00
abstract::Medicinal plants have a vast potential in the treatment of various ailments due to the presence of therapeutically important phytochemicals. Diabetes is a serious metabolic disorder and several marketed medications are available to alleviate the symptoms of diabetes. However, these over the counter drugs are expensive...
journal_title:3 Biotech
pub_type: 杂志文章,评审
doi:10.1007/s13205-018-1528-0
更新日期:2019-01-01 00:00:00
abstract::The present study was aimed to evaluate the immuno-modulatory effect of Brucella-specific recombinant HSP40 (rDnaJ) when co-immunized with Brucella rOmp22 in mice. For this, dnaJ of Brucella abortus was cloned, expressed in E. coli, and purified to homogeneity using Ni-NTA agarose columns. Three groups of mice (n = 6 ...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-019-1905-3
更新日期:2019-10-01 00:00:00
abstract::The possibility of using Aspergillus terreus protease in detergent formulations was investigated. Sodium dodecyl sulfate (SDS) and native polyacrylamide gel electrophoresis indicated that the purified alkaline protease (148.9 U/mg) is a monomeric enzyme with a molecular mass of 16 ± 1 kDa. This was confirmed by liquid...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-014-0200-6
更新日期:2015-02-01 00:00:00
abstract::Current study describes the green, environmental friendly, and cost-effectiveness technique for the preparation of MgO nanoparticles (NPs) via white button mushroom aqueous extract. The synthesized MgO NPs were characterized using equipments such as X-ray diffraction, dynamic light scattering (DLS), scanning electron ...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-017-0894-3
更新日期:2017-08-01 00:00:00
abstract::Actinomycetes strain was isolated from leaf litter soil sample and was identified as Streptomyces sp. by conventional and molecular approaches. The biologically active compound responsible for antimicrobial and anticancer activity of the strain JAR6 was elucidated by solid state fermentation followed by subsequent chr...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-017-1044-7
更新日期:2018-01-01 00:00:00
abstract::The bacterial strain producing thermostable, alklophilic alpha-amylase was identified as Bacillus amyloliquefaciens KCP2 using 16S rDNA gene sequencing data (NCBI Accession No: KF112071). Medium components were optimized through the statistical approach for the synthesis of alpha-amylase by the organism under solid-st...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-014-0213-1
更新日期:2015-04-01 00:00:00
abstract::This study assesses the potential for the lipid production by the oleaginous yeast Cystobasidium oligophagum JRC1 using dairy industry waste cheese whey as a substrate. Cheese whey was used either untreated (UCW) or deproteinized (DCW) at different concentrations (25-100%) to serve as the carbon and energy source. Bot...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-019-1701-0
更新日期:2019-05-01 00:00:00
abstract::Gastric cancer is one of the most common cancers in modern societies. Previous studies have shown that the use of nanoparticle complexes is effective in the treatment of cancer. The aim of this study was to investigate the cytotoxicity and anticancer properties of cobalt oxide (Co3O4) nanoparticles (NPs) functionalize...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-020-02230-4
更新日期:2020-05-01 00:00:00
abstract::Pythium aphanidermatum is one of the common causal pathogen of damping-off disease of beans (Phaseolus vulgaris L.) grown in Manipur. A total of 110 indigenous Trichoderma isolates obtained from North east India were screened for their biocontrol activity which can inhibit the mycelial growth of P. aphanidermatum, the...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-011-0027-3
更新日期:2011-12-01 00:00:00
abstract::Genome sequence of Paenibacillus polymyxa ND25 isolated from cow rumen is reported for being a potential candidate in hydrolysis of lignocellulosic plant biomass. Draft genome sequence generated 5.73 Mb data containing 4922 putative protein coding genes, of which 140 are annotated for glycoside hydrolases. P. polymyxa...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-018-1274-3
更新日期:2018-05-01 00:00:00
abstract::In this study, a novel and stable gene transformation system was developed under control of Maize Proteinase Inhibitor (MPI) as an inducible promoter using the Mesoporous Silica Nanoparticles (MSNs). The functionalized MSNs with a proper particle size were synthesized and attached to a recombinant construct (pDNA) con...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-020-02359-2
更新日期:2020-08-01 00:00:00
abstract::The increasing requirement of food neutral biofuels demands the detection of alternative sources. The use of non-arable land and waste water streams is widely discussed in this regard. A Cyanobacterium was isolated on the area of a possible algae production side near a water treatment plant in the arid desert region a...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-014-0224-y
更新日期:2015-06-01 00:00:00
abstract::We have isolated three novel strains of Trichoderma (two T. harzianum and one T. atroviride) from wild mushroom and tree bark, and evaluated their biocontrol potential against Sclerotium delphinii infecting cultivated cotton seedlings. T. harzianum strain CICR-G, isolated as a natural mycoparasite on a tree-pathogenic...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-013-0150-4
更新日期:2014-06-01 00:00:00
abstract::Forty-three bacterial isolates in five genera were recovered from naturally infected green pepper fruits (38 samples) showing dark brown, irregular-shaped splotches. The pathogenicity test was performed on healthy green pepper fruits and red colonies were from inoculated fruits showing the same symptoms and the infect...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-013-0136-2
更新日期:2014-08-01 00:00:00
abstract::The emerging SARS-CoV-2 viral disease (COVID-19) has caused a global health alert due to its high rate of infection and mortality in individuals with chronic cardiovascular comorbidities, in addition to generating complex clinical conditions. This has forced the scientific community to explore different strategies tha...
journal_title:3 Biotech
pub_type: 杂志文章,评审
doi:10.1007/s13205-020-02619-1
更新日期:2021-02-01 00:00:00
abstract::Of the two commercially cultivated coffee (Coffea) species, C. arabica (arabica) is highly susceptible and C. canephora (robusta) is highly resistant to the insect pest Xylotrechus quadripes (Coleoptera: Cerambycidae), commonly known as coffee white stem borer (CWSB). We constructed a forward-subtracted cDNA library b...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-017-0715-8
更新日期:2017-05-01 00:00:00
abstract::Microbial communities in hot springs at high elevations have been extensively studied worldwide. In this sense, the Indian Himalaya regions is valuable ecosystems for providing both the extreme 'cold' and 'hot' sites for exploring microbial diversity. In the present study, a total of 140 thermophilic bacteria were iso...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-017-0762-1
更新日期:2017-06-01 00:00:00
abstract::One of the most representative core gene sequence of Araneus ventricosus dragline silk protein partial cDNA monomer (JN857964.2) was selected and multimerized using a "head-to-tail" strategy by compatible but nonregenerable sites at both ends resulting in a concatemer of 16 contiguous monomers. This concatemer was clo...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-018-1285-0
更新日期:2018-05-01 00:00:00
abstract::Thermal stress is one of the challenges to crop plants that negatively impacts crop yield. To overcome this ever-growing problem, utilization of regulatory mechanisms, especially microRNAs (miRNAs), that provide efficient and precise regulation in a targeted manner have been found to play determining roles. Besides th...
journal_title:3 Biotech
pub_type: 杂志文章,评审
doi:10.1007/s13205-018-1521-7
更新日期:2018-12-01 00:00:00
abstract::Mannanases, one of the important enzyme group for industry, are produced by numerous filamentous fungi, especially Aspergillus species with different fermentation methods. The aim of this study was to show the best fermentation method of β-mannanase production for fungal growth in fermenter. Therefore, different ferme...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-017-0694-9
更新日期:2017-05-01 00:00:00
abstract::To explore the transcriptional control of phenylpropanoid pathway (PPP) involved in vanillin flavour metabolites production in tuberous roots of Decalepis hamiltonii, four PPP key genes expressed during the tuber development were identified and their mRNA expression profiles were evaluated using quantitative real-time...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-018-1388-7
更新日期:2018-08-01 00:00:00
abstract::2,4-dinitrotoluene (2,4-DNT) is a priority environmental xenobiotic pollutant which has toxic, mutagenic, and carcinogenic properties. Thus, its biodegradation by applying recent approaches such as taking advantage of plant-bacteria interactions is crucial. In this work, the genes from Burkholderia sp. R34, necessary ...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-019-1933-z
更新日期:2019-11-01 00:00:00
abstract::A bacterial strain named XHY-12 was isolated from corn soil samples and identified as Burkholderia sp. based on 16S rDNA sequencing, it displayed high antagonistic activity against 12 fungal pathogens and the common fungal contaminant in grain Aspergillus flavus. Plate experiment showed that XHY-12 fermentation broth ...
journal_title:3 Biotech
pub_type: 杂志文章
doi:10.1007/s13205-020-2112-y
更新日期:2020-04-01 00:00:00