miRNomes involved in imparting thermotolerance to crop plants.

Abstract:

:Thermal stress is one of the challenges to crop plants that negatively impacts crop yield. To overcome this ever-growing problem, utilization of regulatory mechanisms, especially microRNAs (miRNAs), that provide efficient and precise regulation in a targeted manner have been found to play determining roles. Besides their roles in plant growth and development, many recent studies have shown differential regulation of several miRNAs during abiotic stresses including heat stress (HS). Thus, understanding the underlying mechanism of miRNA-mediated gene expression during HS will enable researchers to exploit this regulatory mechanism to address HS responses. This review focuses on the miRNAs and regulatory networks that were involved in physiological, metabolic and morphological adaptations during HS in plant, specifically in crops. Illustrated examples including, the miR156-SPL, miR169-NF-YA5, miR395-APS/AST, miR396-WRKY, etc., have been discussed in specific relation to the crop plants. Further, we have also discussed the available plant miRNA databases and bioinformatics tools useful for miRNA identification and study of their regulatory role in response to HS. Finally, we have briefly discussed the future prospects about the miRNA-related mechanisms of HS for improving thermotolerance in crop plants.

journal_name

3 Biotech

journal_title

3 Biotech

authors

Gahlaut V,Baranwal VK,Khurana P

doi

10.1007/s13205-018-1521-7

subject

Has Abstract

pub_date

2018-12-01 00:00:00

pages

497

issue

12

eissn

2190-572X

issn

2190-5738

pii

1521

journal_volume

8

pub_type

杂志文章,评审
  • Enzymatic hydrolysis of tropical weed xylans using xylanase from Aureobasidium melanogenum PBUAP46 for xylooligosaccharide production.

    abstract::The maximum yield of xylanase from Aureobasidium melanogenum PBUAP46 was 5.19 ± 0.08 U ml-1 when cultured in a production medium containing 3.89% (w/v) rice straw and 0.75% (w/v) NaNO3 as carbon and nitrogen sources, respectively, for 72 h. This enzyme catalyzed well and was relatively stable at pH 7.0 and room temper...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-019-1586-y

    authors: Patipong T,Lotrakul P,Padungros P,Punnapayak H,Bankeeree W,Prasongsuk S

    更新日期:2019-02-01 00:00:00

  • Medium composition potentially regulates the anthocyanin production from suspension culture of Daucus carota.

    abstract::In the present study, an effort has been made to optimize various culture conditions for enhanced production of anthocyanin. Nutrient content of MS medium (ammonium to potassium nitrate ratio and phosphate concentration) had a profound influence on the cell biomass and anthocyanin accumulation in cell suspension cultu...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-018-1146-x

    authors: Saad KR,Parvatam G,Shetty NP

    更新日期:2018-03-01 00:00:00

  • Metatranscriptomics: an approach for retrieving novel eukaryotic genes from polluted and related environments.

    abstract::Metatranscriptomics, a subset of metagenomics, provides valuable information about the whole gene expression profiling of complex microbial communities of an ecosystem. Metagenomic studies mainly focus on the genomic content and identification of microbes present within a community, while metatranscriptomics provides ...

    journal_title:3 Biotech

    pub_type: 杂志文章,评审

    doi:10.1007/s13205-020-2057-1

    authors: Mukherjee A,Reddy MS

    更新日期:2020-02-01 00:00:00

  • Species specific PCR based detection of Escherichia coli from Indian foods.

    abstract::Escherichia coli is a faecal indicator and certain virotypes are known as pathogens. Therefore, detection and prevention of E. coli in food is very important. The existing rapid methods concentrate on detecting the pathogenic E. coli instead of total E. coli population. Present study evaluates the use of two molecular...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-017-0784-8

    authors: Godambe LP,Bandekar J,Shashidhar R

    更新日期:2017-06-01 00:00:00

  • Bacterial laccase: recent update on production, properties and industrial applications.

    abstract::Laccases (benzenediol: oxygen oxidoreductase, EC 1.10.3.2) are multi-copper enzymes which catalyze the oxidation of a wide range of phenolic and non-phenolic aromatic compounds in the presence or absence of a mediator. Till date, laccases have mostly been isolated from fungi and plants, whereas laccase from bacteria h...

    journal_title:3 Biotech

    pub_type: 杂志文章,评审

    doi:10.1007/s13205-017-0955-7

    authors: Chauhan PS,Goradia B,Saxena A

    更新日期:2017-10-01 00:00:00

  • Complete genome and plasmid sequence of a novel Bacillus sp. BD59S, a parasporal protein synthesizing bacterium.

    abstract::Parasporal crystalline inclusion proteins of some Bacillus spp. are of paramount importance due to their insecticidal, nematocidal, and cancer cell killing capabilities. Here, we present a brief report of the complete genome sequence of Bacillus sp. BD59S, a bacterium that produced HeLa cell-killing parasporal crystal...

    journal_title:3 Biotech

    pub_type:

    doi:10.1007/s13205-019-1849-7

    authors: Hasan MM,Khan SN,Karim MM,Begum A,Hoq MM

    更新日期:2019-09-01 00:00:00

  • Molecular identification and genetic diversity among Photorhabdus and Xenorhabdus isolates.

    abstract::Five bacterial strains were isolated from the hemocoel of the greater wax moth larvae (Galleria mellonella) infected with the entomopathogenic nematodes: Heterorhabditis bacteriophora HP88, Heterorhabditis indicus RM1 and Heterorhabditis sp (S1), Steinernema abbasi and Steinernema sp. (S II). Strains were identified a...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-016-0594-4

    authors: Moghaieb REA,Abdelhadi AA,El-Sadawy HA,Allam NAT,Baiome BA,Soliman MH

    更新日期:2017-05-01 00:00:00

  • Plant regeneration from cell suspension culture in Saccharum officinarum L. and ascertaining of genetic fidelity through RAPD and ISSR markers.

    abstract::The aim of this study was to produce sugarcane plantlets from cell suspension culture and study its genetic fidelity using molecular markers. The study was carried out using sugarcane varieties Co 86032 and Q117. Callus cultures of both the varieties were optimized using six different callus induction media. After scr...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-016-0579-3

    authors: Thorat AS,Sonone NA,Choudhari VV,Devarumath RM,Babu KH

    更新日期:2017-05-01 00:00:00

  • Fish trypsins: potential applications in biomedicine and prospects for production.

    abstract::In fishes, trypsins are adapted to different environmental conditions, and the biochemical and kinetic properties of a broad variety of native isoforms have been studied. Proteolytic enzymes remain in high demand in the detergent, food, and feed industries; however, our analysis of the literature showed that, in the l...

    journal_title:3 Biotech

    pub_type: 杂志文章,评审

    doi:10.1007/s13205-018-1208-0

    authors: Jesús-de la Cruz K,Álvarez-González CA,Peña E,Morales-Contreras JA,Ávila-Fernández Á

    更新日期:2018-04-01 00:00:00

  • Biofilm formation in marine bacteria and biocidal sensitivity: interplay between a potent antibiofilm compound (AS162) and quorum-sensing autoinducers.

    abstract::The capacity of two homoserine lactones to stimulate the marine bacteria Pseudoalteromonas ulvae (TC14 strain) for its capacity to form a biofilm when exposed to a potent antibiofilm compound AS162 is reported. Effective concentrations (EC50) of AS162 at 24 h, 48 h, and 72 h were, respectively, of 4.3, 4.4, and 6.0 µM...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-019-1866-6

    authors: Gozoua E,Koffi-Nevry R,Blache Y

    更新日期:2019-09-01 00:00:00

  • Urinary N-acetyl-beta-d-glucosaminidase (NAG) with neutrophil gelatinase-associated lipocalin (NGAL) improves the diagnostic value for proximal tubule damage in diabetic kidney disease.

    abstract::Screening for diabetic kidney disease (DKD) remains a challenge; however, there has been an ongoing research to investigate the diagnostic value of different biomarkers to identify DKD. The aim of this study was to assess the diagnostic value of both N-acetyl-beta-d-glucosaminidase (NAG) and neutrophil gelatinase-asso...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-019-1593-z

    authors: Siddiqui K,Al-Malki B,George TP,Nawaz SS,Rubeaan KA

    更新日期:2019-03-01 00:00:00

  • QTLs and analysis of the candidate gene for amylose, protein, and moisture content in rice (Oryza sativa L.).

    abstract::In this study, we determined using NIRS the heritability percentage of amylose, protein, and moisture content in polished and unpolished rice in a CNDH population derived from a cross between Cheongcheong and Nagdong rice varieties. The results revealed a higher heritability percentage for the amylose content and comp...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-017-0687-8

    authors: Bruno E,Choi YS,Chung IK,Kim KM

    更新日期:2017-05-01 00:00:00

  • New insights into the role of nanotechnology in microbial food safety.

    abstract::Today, the role of nanotechnology in human life is undeniable as a broad range of industries, particularly food and medicine sectors, have been dramatically influenced. Nanomaterials can contribute to food safety by forming new nano-sized ingredients with modified physicochemical characteristics. Nanotechnologies can ...

    journal_title:3 Biotech

    pub_type: 杂志文章,评审

    doi:10.1007/s13205-020-02409-9

    authors: Rahmati F,Hosseini SS,Mahuti Safai S,Asgari Lajayer B,Hatami M

    更新日期:2020-10-01 00:00:00

  • The rate of electrical energy dissipation (power) and the RC constant unify all electroporation parameters.

    abstract::Electroporation parameters can be optimized by coupling RC constant values with the amount of electrical power dissipation in the electroporation medium. Electroporation efficiency increases more steeply with power at low power values. ...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-012-0105-1

    authors: Lurquin PF

    更新日期:2013-08-01 00:00:00

  • Antinociceptive and anti-inflammatory activity of α-d-mannan from Pseudozyma sp.

    abstract::Pseudozyma sp. are yeasts that are commercially important due to their production of glycolipid biosurfactants, squalene, itaconic acid, and exopolysaccharide. The search for other analgesia inducing drugs, such as opiates and non-steroidal anti-inflammatory drugs (NSAIDs), as alternatives is beneficial. In this study...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-020-02635-1

    authors: Valasques Junior GL,Dos Santos JDG,Chaves PFP,Cordeiro LMC,de Jesus CL,de Lima FO,Boffo EF,de Assis SA

    更新日期:2021-02-01 00:00:00

  • Enhanced production of berberine in In vitro regenerated cell of Tinospora cordifolia and its analysis through LCMS QToF.

    abstract::Tinospora cordifolia is a prioritized medicinal plant and having an immense medicinal importance especially in Indian medicinal system. But this plant needs a regeneration protocol for its rapid propagation. An efficient regeneration protocol was developed for T. cordifolia using nodal explants. High frequency of mult...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-016-0592-6

    authors: Mittal J,Sharma MM

    更新日期:2017-05-01 00:00:00

  • Agricultural residues for cellulolytic enzyme production by Aspergillus niger: effects of pretreatment.

    abstract::Different agricultural residues were considered in this study for their ability to support cellulolytic enzyme production by Aspergillus niger. A total of eleven agricultural residues including finger millet hulls, sorghum hulls, soybean hulls, groundnut husk, banana peels, corn stalk, cassava peels, sugarcane bagasse...

    journal_title:3 Biotech

    pub_type:

    doi:10.1007/s13205-015-0294-5

    authors: Salihu A,Abbas O,Sallau AB,Alam MZ

    更新日期:2015-12-01 00:00:00

  • Role of phosphoglucomutase in regulating trehalose metabolism in Nilaparvata lugens.

    abstract::Phosphoglucomutase (PGM) is a key enzyme in glycolysis and gluconeogenesis, regulating both glycogen and trehalose metabolism in insects. In this study, we explored the potential function of phosphoglucomutase (PGM) using RNA interference technology in Nilaparvata lugens, the brown planthopper. PGM1 and PGM2 were foun...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-020-2053-5

    authors: Pan BY,Liu YK,Wu HK,Pang XQ,Wang SG,Tang B,Xu CD

    更新日期:2020-02-01 00:00:00

  • Whole genome shotgun sequence of Bacillus paralicheniformis strain KMS 80, a rhizobacterial endophyte isolated from rice (Oryza sativa L.).

    abstract::Bacillus paralicheniformis strain KMS 80 (MTCC No. 12704) is an isolate from the root tissues of rice (Oryza sativa L.) that displays biological nitrogen fixation and plant growth promoting abilities. Here, we report the complete genome sequence of this strain, which contains 4,566,040 bp, 4424 protein-coding genes, 8...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-018-1242-y

    authors: Annapurna K,Govindasamy V,Sharma M,Ghosh A,Chikara SK

    更新日期:2018-05-01 00:00:00

  • Preparation, characterization, and anticancer efficacy of novel cobalt oxide nanoparticles conjugated with thiosemicarbazide.

    abstract::Gastric cancer is one of the most common cancers in modern societies. Previous studies have shown that the use of nanoparticle complexes is effective in the treatment of cancer. The aim of this study was to investigate the cytotoxicity and anticancer properties of cobalt oxide (Co3O4) nanoparticles (NPs) functionalize...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-020-02230-4

    authors: Jarestan M,Khalatbari K,Pouraei A,Sadat Shandiz SA,Beigi S,Hedayati M,Majlesi A,Akbari F,Salehzadeh A

    更新日期:2020-05-01 00:00:00

  • Diversity of bacterial endophytes in Panax ginseng and their protective effects against pathogens.

    abstract::Although endophytic bacteria are known to colonize Panax ginseng, little is known about their diversity and roles. We addressed in the present study by comparing endophytic bacterial populations in P. ginseng plants of different ages (2-6 years) and in various tissue types (root, stem, leaf, and flower stalk). A total...

    journal_title:3 Biotech

    pub_type:

    doi:10.1007/s13205-018-1417-6

    authors: Hong CE,Kim JU,Lee JW,Lee SW,Jo IH

    更新日期:2018-09-01 00:00:00

  • Patterns of chemical diversity in the marine ascidian Phallusia spp.: anti-tumor activity and metabolic pathway inhibiting steroid biosynthesis.

    abstract::The complex nature of marine biodiversity is partially responsible for the lack of studies in Indian ascidian species, which often target a small number of novel biomolecules. We performed untargeted metabolomics using gas chromatography-mass spectrometry (GC-MS) in two invasive ascidian species to investigate the int...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-018-1273-4

    authors: Palanisamy SK,Arumugam V,Peter MD,Sundaresan U

    更新日期:2018-05-01 00:00:00

  • Molecular mechanism, diagnosis, and potential treatment for novel coronavirus (COVID-19): a current literature review and perspective.

    abstract::Novel coronavirus disease 2019 (COVID-19) is a positive-sense single-stranded RNA virus which belongs to the Coronaviridae family. COVID-19 outbreak became evident after the severe acute respiratory syndrome coronavirus and the Middle East respiratory syndrome coronavirus in the twenty-first century as the start of th...

    journal_title:3 Biotech

    pub_type: 杂志文章,评审

    doi:10.1007/s13205-021-02657-3

    authors: Ratre YK,Kahar N,Bhaskar LVKS,Bhattacharya A,Verma HK

    更新日期:2021-02-01 00:00:00

  • Involvement of exogenous polyamines enhances regeneration and Agrobacterium-mediated genetic transformation in half-seeds of soybean.

    abstract::The present work demonstrates the participation of polyamines (PAs) to improve direct regeneration and Agrobacterium-mediated transformation in soybean half-seeds. The inclusion of PAs to culture medium along with optimal plant growth regulators (PGRs) enhanced shoot induction [98.3 %; 4.44 µM N6-benzyladenine (BA) an...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-016-0448-0

    authors: Arun M,Chinnathambi A,Subramanyam K,Karthik S,Sivanandhan G,Theboral J,Alharbi SA,Kim CK,Ganapathi A

    更新日期:2016-12-01 00:00:00

  • Evaluation of stress effects of copper oxide nanoparticles in Brassica napus L. seedlings.

    abstract::Rapid growth of nanotechnology has enabled the production and use of engineered nanoparticles (ENPs) in several industries as well as in agriculture areas. This has raised ecotoxicological concerns due to the release of ENPs to the environment. In the present study, we investigated the effects of interactions of coppe...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-017-0929-9

    authors: Nair PMG,Chung IM

    更新日期:2017-10-01 00:00:00

  • Anaerobic digestion of sulphate-rich post-tanning wastewater at different COD/sulphate and F/M ratios.

    abstract::Anaerobic digestion of post-tanning wastewater was performed in batch anaerobic digester to evaluate the effect of COD/sulphate ratio [0.62, 0.69, and 1.20 (w/w) %] and F/M ratio [0.2, 0.3, 0.5, 0.7, 0.9, 1.1, 1.3, and 1.5 (w/w) %)] on the removal efficiency of COD. The F/M ratio of 0.3 was found to be the optimum rat...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-018-1154-x

    authors: Mahesh M,Arivizhivendhan KV,Nivetha K,Swarnalatha S,Sekaran G

    更新日期:2018-02-01 00:00:00

  • Establishment of an in vitro regeneration system and genetic transformation of the Tunisian 'Maltese half-blood' (Citrus sinensis): an agro-economically important variety.

    abstract::An efficient in vitro regeneration system using epicotyl segments was developed and then used for optimizing genetic transformation of the Tunisian 'Maltese half-blood' (Citrus sinensis) variety using phosphinothricin (PPT) resistance as a selectable marker. The maximum regeneration efficiency was achieved after incub...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-020-2097-6

    authors: Jardak R,Boubakri H,Zemni H,Gandoura S,Mejri S,Mliki A,Ghorbel A

    更新日期:2020-03-01 00:00:00

  • Immobilization of endoglucanase Cel9A on chitosan nanoparticles leads to its stabilization against organic solvents: the use of polyols to improve the stability.

    abstract::The immobilization of enzymes improves their stability in non-conventional media such as organic solvents. In this work, the effects of solvents (DMSO, methanol, ethanol, and n-propanol) on the endoglucanase Cel9A activity and stability were studied. Then, the enzymes were stabilized by its immobilization on chitosan ...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-019-1794-5

    authors: Mohammadi M,Najavand S,Pazhang M

    更新日期:2019-07-01 00:00:00

  • Use of Ca-alginate immobilized Pseudomonas aeruginosa for repeated batch and continuous degradation of Endosulfan.

    abstract::The current investigation is taken up with the aim of studying repeated batch and continuous degradation of Endosulfan, using Ca-alginate immobilized cells of Pseudomonas aeruginosa isolated from an agricultural soil. The work involves the study of genes and enzymes involved in the degradation of the pesticide and was...

    journal_title:3 Biotech

    pub_type: 杂志文章

    doi:10.1007/s13205-016-0438-2

    authors: Pradeep V,Subbaiah UM

    更新日期:2016-12-01 00:00:00

  • Biodiscovery of antibacterial constituents from the endolichenic fungi isolated from Parmotrema rampoddense.

    abstract::A total of nine endolichenic fungi were isolated from the foliose lichen Parmotrema rampoddense (Nyl.) Hale. Of the nine endolichenic fungi, three taxa (Fusarium proliferatum, Nemania primolutea, Daldinia eschsholtzii) showed antibacterial activities as determined by the disk diffusion assay against ESKAPE bacterial p...

    journal_title:3 Biotech

    pub_type:

    doi:10.1007/s13205-020-02213-5

    authors: Tan MA,Castro SG,Oliva PMP,Yap PRJ,Nakayama A,Magpantay HD,Dela Cruz TEE

    更新日期:2020-05-01 00:00:00