Systematic analysis of the kalimantacin assembly line NRPS module using an adapted targeted mutagenesis approach.

abstract：:Despite the relevance of landscape, regarding the spatial patterning of microbial communities and the relative influence of environmental parameters versus human activities, few investigations have been conducted at this scale. Here, we used a systematic grid to characterize the distribution of soil microbial communit...

journal_title：MicrobiologyOpen

authors： Constancias F,Terrat S,Saby NP,Horrigue W,Villerd J,Guillemin JP,Biju-Duval L,Nowak V,Dequiedt S,Ranjard L,Chemidlin Prévost-Bouré N

更新日期：2015-06-01 00:00:00

abstract：:[NiFe]-hydrogenases catalyze the reversible conversion of molecular hydrogen into protons end electrons. This reaction takes place at a NiFe(CN)2 (CO) cofactor located in the large subunit of the bipartite hydrogenase module. The corresponding apo-protein carries usually a C-terminal extension that is cleaved off by a...

journal_title：MicrobiologyOpen

authors： Hartmann S,Frielingsdorf S,Caserta G,Lenz O

更新日期：2020-06-01 00:00:00

abstract：:To investigate the possible effects of sulfamonomethoxine (SMM) on Nile tilapia (Oreochromis niloticus), we quantitatively evaluated the microbial shifts in the intestines of Nile tilapia in response to different doses of SMM (200 and 300 mg/kg) using 16S rRNA gene sequencing. At the phylum level, the control group (0...

journal_title：MicrobiologyOpen

authors： Ming J,Fu Z,Ma Z,Zhou L,Zhang Z,Song C,Yuan X,Wu Q

更新日期：2020-11-01 00:00:00

abstract：:The emerging pollutants antibiotic resistance genes (ARGs) are prevalent in aquatic environments such as estuary. Coastal mangrove ecosystems always serve as natural wetlands for receiving sewage which always carry ARGs. Currently, the research considering ARG distribution in mangrove ecosystems gains more interest. I...

journal_title：MicrobiologyOpen

authors： Zhao H,Yan B,Mo X,Li P,Li B,Li Q,Li N,Mo S,Ou Q,Shen P,Wu B,Jiang C

更新日期：2019-11-01 00:00:00

abstract：:Human gut microbiome dysbiosis has been associated with the onset of metabolic diseases and disorders. However, the critical factors leading to dysbiosis are poorly understood. In this study, we provide increasing evidence of the association of diet type and body mass index (BMI) and how they relatively influence the ...

journal_title：MicrobiologyOpen

authors： Davis SC,Yadav JS,Barrow SD,Robertson BK

更新日期：2017-08-01 00:00:00

abstract：:Genomic analysis points to N-glycosylation as being a common posttranslational modification in Archaea. To date, however, pathways of archaeal N-glycosylation have only been described for few species. With this in mind, the similarities of N-linked glycans decorating glycoproteins in the haloarchaea Haloferax volcanii...

journal_title：MicrobiologyOpen

authors： Kandiba L,Eichler J

更新日期：2015-02-01 00:00:00

abstract：:Urinary tract infections (UTIs) are among the most common bacterial infections in humans. Although a number of bacteria can cause UTIs, most cases are due to infection by uropathogenic Escherichia coli (UPEC). UPEC are a genetically heterogeneous group that exhibit several virulence factors associated with colonizatio...

journal_title：MicrobiologyOpen

authors： Schifano E,Marazzato M,Ammendolia MG,Zanni E,Ricci M,Comanducci A,Goldoni P,Conte MP,Uccelletti D,Longhi C

更新日期：2019-06-01 00:00:00

abstract：BACKGROUND:The microbiome is an integral component of many animal species, potentially affecting behavior, physiology, and other biological properties. Despite this importance, bacterial communities remain vastly understudied in many groups of invertebrates, including mites. Quill mites (Acariformes: Syringophilidae) a...

journal_title：MicrobiologyOpen

authors： Glowska E,Filutowska ZK,Dabert M,Gerth M

更新日期：2020-05-01 00:00:00

abstract：:During mixed-acid fermentation Escherichia coli produces formate, which is initially excreted out the cell. Accumulation of formate, and dropping extracellular pH, leads to biosynthesis of the formate hydrogenlyase (FHL) complex. FHL consists of membrane and soluble domains anchored within the inner membrane. The solu...

journal_title：MicrobiologyOpen

authors： Pinske C,Sargent F

更新日期：2016-10-01 00:00:00

abstract：:Bacterial colonization of the urogenital tract is limited by innate defenses, including the production of antimicrobial peptides (AMPs). Uropathogenic Escherichia coli (UPEC) resist AMP-killing to cause a range of urinary tract infections (UTIs) including asymptomatic bacteriuria, cystitis, pyelonephritis, and sepsis....

journal_title：MicrobiologyOpen

authors： Desloges I,Taylor JA,Leclerc JM,Brannon JR,Portt A,Spencer JD,Dewar K,Marczynski GT,Manges A,Gruenheid S,Le Moual H,Thomassin JL

更新日期：2019-11-01 00:00:00

abstract：:The interactions of pathogens and phagocytes are complex. Our study demonstrated that Aeromonas hydrophila B11 can survive in the macrophagocytes of Tilapia mossambica. To explore the regulatory processes of A. hydrophila survival in the macrophagocytes, we used the mini-Tn10 transposon mutagenesis system to build a m...

journal_title：MicrobiologyOpen

authors： Jiang Q,Chen W,Qin Y,Huang L,Xu X,Zhao L,Yan Q

更新日期：2017-08-01 00:00:00

abstract：:Basic cosmetics was used by volunteers belonging to high (HHG) and low (LHG) hydration groups for 4 weeks, and bacterial communities and biophysical parameters in facial skin were analyzed. Hydration level increases and transepidermal water loss and roughness decreases were observed in both groups after cosmetic use. ...

journal_title：MicrobiologyOpen

authors： Lee HJ,Jeong SE,Lee S,Kim S,Han H,Jeon CO

更新日期：2018-04-01 00:00:00

abstract：:The extreme radiation resistance of Deinococcus bacteria requires the radiation-stimulated cleavage of protein DdrO by a specific metalloprotease called IrrE. DdrO is the repressor of a predicted radiation/desiccation response (RDR) regulon, composed of radiation-induced genes having a conserved DNA motif (RDRM) in th...

journal_title：MicrobiologyOpen

authors： Blanchard L,Guérin P,Roche D,Cruveiller S,Pignol D,Vallenet D,Armengaud J,de Groot A

更新日期：2017-08-01 00:00:00

abstract：:UV resistance of bacteria isolated from the marine cyanobacterium Moorea producens has not been observed previously, findings which highlight how unsafe germicidal UV irradiation for sterilization of air, food, and water could be. Further, UV resistance of Bacillus licheniformis is being observed for the first time. T...

journal_title：MicrobiologyOpen

authors： Dzeha T,Nyiro C,Kardasopoulos D,Mburu D,Mwafaida J,Hall MJ,Burgess JG

更新日期：2019-04-01 00:00:00

abstract：:Eggerthella timonensis strain Marseille-P3135 is a new bacterial species, isolated from the stool sample of a healthy 8-year-old pygmy female. This strain (LT598568) showed a 16S rRNA sequence similarity of 96.95% with its phylogenetically closest species with standing in nomenclature Eggerthella lenta strain DSM 2243...

journal_title：MicrobiologyOpen

authors： Bilen M,Fonkou MDM,Tomei E,Armstrong N,Bittar F,Lagier JC,Daoud Z,Fournier PE,Raoult D,Cadoret F

更新日期：2018-10-01 00:00:00

abstract：:The effect of elevated atmospheric CO2 concentration [CO2 ] on the diversity and composition of the prokaryotic community inhabiting the rhizosphere of winter barley (Hordeum vulgare L.) was investigated in a field experiment, using open-top chambers. Rhizosphere samples were collected at anthesis (flowering stage) fr...

journal_title：MicrobiologyOpen

authors： Szoboszlay M,Näther A,Mitterbauer E,Bender J,Weigel HJ,Tebbe CC

更新日期：2017-08-01 00:00:00

abstract：:Gene expression in Haloarcula hispanica cells infected with the gammapleolipovirus His2 was studied using a custom DNA microarray. Total RNA from cells sampled at 0, 1, 2, 3, and 4.5 hr postinfection was reverse-transcribed into labeled cDNA and hybridized to microarrays, revealing temporal and differential expression...

journal_title：MicrobiologyOpen

authors： Lee STM,Ding JY,Chiang PW,Dyall-Smith M,Tang SL

更新日期：2020-05-01 00:00:00

abstract：:The Hatton-Rockall Basin (North-East Atlantic) is an area with potential for deep-sea (2,900 m) hydrocarbon exploration. Following the Deepwater Horizon oil spill, many investigations into the responses of sediment microbial communities to oil pollution have been undertaken. However, hydrostatic pressure is a paramete...

journal_title：MicrobiologyOpen

authors： Perez Calderon LJ,Gontikaki E,Potts LD,Shaw S,Gallego A,Anderson JA,Witte U

更新日期：2019-06-01 00:00:00

abstract：AIMS:To assess a cost-effective in-house selective plate formula for actively screening carbapenem-resistant Enterobacteriaceae (CRE). METHODOLOGY AND RESULTS:The in-house formula included CHROMagarTM Orientation, meropenem, and ingredients present in the Mac-Conkey formula, such as bile salts and crystal violet (pH 6...

journal_title：MicrobiologyOpen

authors： Tran TC,Pham BT,Pham VH,Ngo TA,Hanberger H,Larsson M,Olson L

更新日期：2020-12-01 00:00:00

abstract：:Diatoms frequently dominate marine and freshwater biofilms as major primary producers. Nutrient resources in these biofilms are patchily distributed and fluctuate dynamically over time. We recently reported that this spatially and temporally structured environment can be exploited by motile diatoms that use chemoattra...

journal_title：MicrobiologyOpen

authors： V Bondoc KG,Lembke C,Vyverman W,Pohnert G

更新日期：2019-04-01 00:00:00

abstract：:RodZ is important for maintaining the rod shape of Escherichia coli. Loss of RodZ causes conversion of the rod shape to a round shape and a growth rate slower than that of wild-type cells. Suppressor mutations that simultaneously restore both the growth rates and the rod shape were isolated. Most of the suppressor mut...

journal_title：MicrobiologyOpen

authors： Shiomi D,Niki H

更新日期：2013-10-01 00:00:00

abstract：:In Escherichia coli, coordinated activation and deactivation of DnaA allows for proper timing of the initiation of chromosomal synthesis at the origin of replication (oriC) and assures initiation occurs once per cell cycle. In vitro, acidic phospholipids reactivate DnaA, and in vivo depletion of acidic phospholipids, ...

journal_title：MicrobiologyOpen

authors： Fingland N,Flåtten I,Downey CD,Fossum-Raunehaug S,Skarstad K,Crooke E

更新日期：2012-12-01 00:00:00

abstract：:A new type of structural extracellular polymers (EPS) was extracted from aerobic granular sludge dominated by ammonium-oxidizing bacteria. It was analyzed by Raman and FTIR spectroscopy to characterize specific amino acids and protein secondary structure, and by SDS-PAGE with different stains to identify different gly...

journal_title：MicrobiologyOpen

authors： Lin Y,Reino C,Carrera J,Pérez J,van Loosdrecht MCM

更新日期：2018-12-01 00:00:00

abstract：:The Siamese crocodile (Crocodylus siamensis) is a freshwater, endangered crocodile with high economic value in the farming industry. Gut microflora plays an essential role in host physiological activity, and it contributes significantly to both the health and diseased states of animals. However, thus far, no study has...

journal_title：MicrobiologyOpen

authors： Lin M,Zeng C,Li Z,Ma Y,Jia X

更新日期：2019-12-01 00:00:00

abstract：:Dinitrogen fixation, the biological reduction in N2 gas to ammonia contributes to the supply of new nitrogen in the surface ocean. To understand the diversity and abundance of potentially diazotrophic (N2 fixing) microorganisms associated with marine zooplankton, especially copepods, the nifH gene was studied using zo...

journal_title：MicrobiologyOpen

authors： Azimuddin KM,Hirai J,Suzuki S,Haider MN,Tachibana A,Watanabe K,Kitamura M,Hashihama F,Takahashi K,Hamasaki K

更新日期：2016-12-01 00:00:00

abstract：:This study compared the sensitivity of spores from virulent and attenuated Bacillus anthracis strains in suspension to inactivation by various chemical disinfectants. Spore suspensions from two virulent strains (A0256 and A0372) and two attenuated strains (Sterne and A0141) of B. anthracis were tested against two alde...

journal_title：MicrobiologyOpen

authors： March JK,Cohen MN,Lindsey JM,Millar DA,Lowe CW,Bunnell AJ,O'Neill KL,Schaalje GB,Robison RA

更新日期：2012-12-01 00:00:00

abstract：:Directed enzyme prodrug therapy (DEPT) is a cancer chemotherapy strategy in which bacterial enzymes are delivered to a cancer site before prodrug administration, resulting in prodrug activation at the cancer site and more localized treatment. A major limitation to DEPT is the poor effectiveness of the most studied enz...

journal_title：MicrobiologyOpen

authors： Ball P,Halliwell J,Anderson S,Gwenin V,Gwenin C

更新日期：2020-10-01 00:00:00

abstract：:Protein lysine acetylation, a dynamic and reversible posttranslational modification, plays a crucial role in several cellular processes, including cell cycle regulation, metabolism, enzymatic activities, and protein interactions. Brenneria nigrifluens is a pathogen of walnut trees with shallow bark canker and can caus...

journal_title：MicrobiologyOpen

authors： Li Y,Xue H,Bian DR,Xu G,Piao C

更新日期：2020-01-01 00:00:00

abstract：:In microbes that fix nitrogen, nitrogenase catalyzes the conversion of N2 to ammonia in an ATP-demanding reaction. To help conserve energy some bacteria inhibit nitrogenase activity upon exposure to ammonium. The purple nonsulfur phototrophic bacterium Rhodopseudomonas palustris strain CGA009 can synthesize three func...

journal_title：MicrobiologyOpen

authors： Heiniger EK,Harwood CS

更新日期：2015-08-01 00:00:00

abstract：:Sporulation in Bacillus subtilis is induced upon starvation. In a widely accepted model, an N-terminal "sensor" domain of the major sporulation kinase KinA recognizes a hypothetical starvation signal(s) and autophosphorylates a histidine residue to activate the master regulator Spo0A via a multicomponent phosphorelay....

journal_title：MicrobiologyOpen

authors： Kiehler B,Haggett L,Fujita M

更新日期：2017-08-01 00:00:00