Comparative analysis of the composition and function of fecal-gut bacteria in captive juvenile Crocodylus siamensis between healthy and anorexic individuals.

abstract：:Resistance to colistin, mediated by chromosomal mutations and more recently, by plasmid-borne mcr genes, is increasingly being reported in bacterial isolates taken from humans, animals, farms, foods, and the environment. To easily identify and contain this quickly spreading menace, efficient diagnostics that are cheap...

journal_title：MicrobiologyOpen

authors： Osei Sekyere J

更新日期：2019-04-01 00:00:00

abstract：:Urinary tract infections (UTIs) are among the most common bacterial infections in humans. Although a number of bacteria can cause UTIs, most cases are due to infection by uropathogenic Escherichia coli (UPEC). UPEC are a genetically heterogeneous group that exhibit several virulence factors associated with colonizatio...

journal_title：MicrobiologyOpen

authors： Schifano E,Marazzato M,Ammendolia MG,Zanni E,Ricci M,Comanducci A,Goldoni P,Conte MP,Uccelletti D,Longhi C

更新日期：2019-06-01 00:00:00

abstract：:[NiFe]-hydrogenases catalyze the reversible conversion of molecular hydrogen into protons end electrons. This reaction takes place at a NiFe(CN)2 (CO) cofactor located in the large subunit of the bipartite hydrogenase module. The corresponding apo-protein carries usually a C-terminal extension that is cleaved off by a...

journal_title：MicrobiologyOpen

authors： Hartmann S,Frielingsdorf S,Caserta G,Lenz O

更新日期：2020-06-01 00:00:00

abstract：:Copper resistance system in the cyanobacterium Synechocystis sp. PCC 6803 comprises two operons, copMRS and copBAC, which are expressed in response to copper in the media. copBAC codes for a heavy-metal efflux-resistance nodulation and division (HME-RND) system, while copMRS codes for a protein of unknown function, Co...

journal_title：MicrobiologyOpen

authors： Giner-Lamia J,López-Maury L,Florencio FJ

更新日期：2015-02-01 00:00:00

abstract：:Microbial biofilms are communities of surface-adhered cells enclosed in a matrix of extracellular polymeric substances. Bacterial cells in biofilm are 10~1,000-fold more resistant to antimicrobials than the planktonic cells. Burgeoning antibiotic resistance in Pseudomonas aeruginosa biofilm has necessitated the develo...

journal_title：MicrobiologyOpen

authors： She P,Wang Y,Luo Z,Chen L,Tan R,Wang Y,Wu Y

更新日期：2018-02-01 00:00:00

abstract：:The objective of this study was to phylogenetically analyze microorganisms from the domains Bacteria and Archaea in hypersaline sediment from Death Valley National Park. Using domain-specific primers, a region of the 16S rRNA gene was amplified using polymerase chain reaction (PCR), and the product was subsequently us...

journal_title：MicrobiologyOpen

authors： Kim JS,Makama M,Petito J,Park NH,Cohan FM,Dungan RS

更新日期：2012-06-01 00:00:00

abstract：:Protein lysine acetylation, a dynamic and reversible posttranslational modification, plays a crucial role in several cellular processes, including cell cycle regulation, metabolism, enzymatic activities, and protein interactions. Brenneria nigrifluens is a pathogen of walnut trees with shallow bark canker and can caus...

journal_title：MicrobiologyOpen

authors： Li Y,Xue H,Bian DR,Xu G,Piao C

更新日期：2020-01-01 00:00:00

abstract：:The composition and function of the microbial community in the gastrointestinal tract (GIT) have increasingly captured the attention of nutritionists because these traits affect the nutrient utilization efficiency and health of host animals. Little information has been reported on these aspects of the goat GIT. This s...

journal_title：MicrobiologyOpen

authors： Wang L,Jin L,Xue B,Wang Z,Peng Q

更新日期：2019-09-01 00:00:00

abstract：:A yeast expression plasmid was constructed containing a cardenolide biosynthetic module, referred to as CARD II, using the AssemblX toolkit, which enables the assembly of large DNA constructs. The genes cloned into the vector were (a) a Δ5 -3β-hydroxysteroid dehydrogenase gene from Digitalis lanata, (b) a steroid Δ5 -...

journal_title：MicrobiologyOpen

authors： Rieck C,Geiger D,Munkert J,Messerschmidt K,Petersen J,Strasser J,Meitinger N,Kreis W

更新日期：2019-12-01 00:00:00

abstract：:Probiotic bacteria are frequently used to treat intestinal diseases or to improve health; however, little is known about the evolutionary changes of these bacteria during probiotic manufacture and the bacterial ability to colonize the intestine. It has been observed that when bacteria adapt to a new environment, they ...

journal_title：MicrobiologyOpen

authors： López L,Calderón D,Cardenas P,Prado MB,Valle C,Trueba G

更新日期：2020-02-01 00:00:00

abstract：:In our previous work, we demonstrated that viable but nonculturable (VBNC) Vibrio cholerae O1 and O139 were converted to culturable by coculture with eukaryotic cells. Furthermore, we isolated a factor converting VBNC V. cholerae to culturable (FCVC) from a eukaryotic cell line, HT-29. In this study, we purified FCVC ...

journal_title：MicrobiologyOpen

authors： Senoh M,Hamabata T,Takeda Y

更新日期：2015-08-01 00:00:00

abstract：:Microbially mediated decomposition of particulate organic carbon (POC) is a central component of the oceanic carbon cycle, controlling the flux of organic carbon from the surface ocean to the deep ocean. Yet, the specific microbial taxa responsible for POC decomposition and degradation in the deep ocean are still unkn...

journal_title：MicrobiologyOpen

authors： Liu Y,Fang J,Jia Z,Chen S,Zhang L,Gao W

更新日期：2020-05-01 00:00:00

abstract：:Metal- and pesticide-tolerant biocontrol agents are preferred in integrated pest management, as such strains can be applied in combination with different pesticides. The Bacillus velezensis strain SZMC 6161J proved to be sensitive to copper, nickel, zinc, and cadmium, while manganese elevated its growth. At concentrat...

journal_title：MicrobiologyOpen

authors： Vörös M,Manczinger L,Kredics L,Szekeres A,Shine K,Alharbi NS,Khaled JM,Vágvölgyi C

更新日期：2019-03-01 00:00:00

abstract：:Sourdough fermentation is a traditional process that is used to improve bread quality. A spontaneous sourdough ecosystem consists of a mixture of flour and water that is fermented by endogenous lactic acid bacteria (LAB) and yeasts. The aim of this study was to identify bacterial diversity during backslopping of spont...

journal_title：MicrobiologyOpen

authors： Boreczek J,Litwinek D,Żylińska-Urban J,Izak D,Buksa K,Gawor J,Gromadka R,Bardowski JK,Kowalczyk M

更新日期：2020-04-01 00:00:00

abstract：:Sporulation in Bacillus subtilis is induced upon starvation. In a widely accepted model, an N-terminal "sensor" domain of the major sporulation kinase KinA recognizes a hypothetical starvation signal(s) and autophosphorylates a histidine residue to activate the master regulator Spo0A via a multicomponent phosphorelay....

journal_title：MicrobiologyOpen

authors： Kiehler B,Haggett L,Fujita M

更新日期：2017-08-01 00:00:00

abstract：:Bacterial community structures were evaluated in oil samples using culture-independent pyrosequencing, including oil mousses collected on sea surface and salt marshes during the Deepwater Horizon oil spill, and oil deposited in sediments adjacent to the wellhead 1 year after the spill. Phylogenetic analysis suggested ...

journal_title：MicrobiologyOpen

authors： Liu Z,Liu J

更新日期：2013-06-01 00:00:00

abstract：:Citrus canker is an economically important disease that affects orange production in some of the most important producing areas around the world. It represents a great threat to the Brazilian and North American citriculture, particularly to the states of São Paulo and Florida, which together correspond to the biggest ...

journal_title：MicrobiologyOpen

authors： Sumares JA,Morão LG,Martins PM,Martins DA,Gomes E,Belasque J Jr,Ferreira H

更新日期：2016-04-01 00:00:00

abstract：:Extracts from white birch have been reported to possess antimicrobial properties, but no study has linked the chemical composition of bark extract with antimicrobial activity. This study aimed to identify white birch (Betula papyrifera Marshall) bark extracts with antimicrobial activity and elucidate its composition. ...

journal_title：MicrobiologyOpen

authors： Blondeau D,St-Pierre A,Bourdeau N,Bley J,Lajeunesse A,Desgagné-Penix I

更新日期：2020-01-01 00:00:00

abstract：:Bacterial nitric oxide (NO) synthases (bNOS) play diverse and important roles in microbial physiology, stress resistance, and virulence. Although bacterial and mammalian NOS enzymes have been well-characterized, comparatively little is known about the prevalence and function of NOS enzymes in Archaea. Analysis of arch...

journal_title：MicrobiologyOpen

authors： Orsini SS,James KL,Reyes DJ,Couto-Rodriguez RL,Gulko MK,Witte A,Carroll RK,Rice KC

更新日期：2020-11-01 00:00:00

abstract：:The extreme radiation resistance of Deinococcus bacteria requires the radiation-stimulated cleavage of protein DdrO by a specific metalloprotease called IrrE. DdrO is the repressor of a predicted radiation/desiccation response (RDR) regulon, composed of radiation-induced genes having a conserved DNA motif (RDRM) in th...

journal_title：MicrobiologyOpen

authors： Blanchard L,Guérin P,Roche D,Cruveiller S,Pignol D,Vallenet D,Armengaud J,de Groot A

更新日期：2017-08-01 00:00:00

abstract：:Streptococcus dysgalactiae subsp. dysgalactiae (SDSD) is a major cause of bovine mastitis and has been regarded as an animal-restricted pathogen, although rare infections have been described in humans. Previous studies revealed the presence of virulence genes encoded by phages of the human pathogen Group A Streptococc...

journal_title：MicrobiologyOpen

authors： Alves-Barroco C,Roma-Rodrigues C,Raposo LR,Brás C,Diniz M,Caço J,Costa PM,Santos-Sanches I,Fernandes AR

更新日期：2019-01-01 00:00:00

abstract：:Several factors affect protein expression in Pichia pastoris, one among them is the carbon source. In this work, we studied the effect of this factor on the expression level of rabies virus glycoprotein (RABV-G) in two recombinant clones harboring seven copies of the gene of interest. The expression was driven either ...

journal_title：MicrobiologyOpen

authors： Ben Azoun S,Kallel H

更新日期：2017-08-01 00:00:00

abstract：:A new type of structural extracellular polymers (EPS) was extracted from aerobic granular sludge dominated by ammonium-oxidizing bacteria. It was analyzed by Raman and FTIR spectroscopy to characterize specific amino acids and protein secondary structure, and by SDS-PAGE with different stains to identify different gly...

journal_title：MicrobiologyOpen

authors： Lin Y,Reino C,Carrera J,Pérez J,van Loosdrecht MCM

更新日期：2018-12-01 00:00:00

abstract：:During mixed-acid fermentation Escherichia coli produces formate, which is initially excreted out the cell. Accumulation of formate, and dropping extracellular pH, leads to biosynthesis of the formate hydrogenlyase (FHL) complex. FHL consists of membrane and soluble domains anchored within the inner membrane. The solu...

journal_title：MicrobiologyOpen

authors： Pinske C,Sargent F

更新日期：2016-10-01 00:00:00

abstract：:Increasing popularity of preservative-free cosmetics necessitates in-depth research, specifically as bacteria can react to local factors by important metabolic changes. In this respect, investigating the effect of cosmetic preparations on pathogenic strains of commensal species such as acneic forms of Cutibacterium ac...

journal_title：MicrobiologyOpen

authors： Gannesen AV,Borrel V,Lefeuvre L,Netrusov AI,Plakunov VK,Feuilloley MGJ

更新日期：2019-03-01 00:00:00

abstract：:Microbial communities in sediments play an important role in alpine lake ecosystems. However, the microbial diversity and community composition of alpine lake sediments from the Hengduan Mountains remain largely unknown. Therefore, based on the Illumina MiSeq platform, high-throughput sequencing analysis of the 16S rR...

journal_title：MicrobiologyOpen

authors： Liao B,Yan X,Zhang J,Chen M,Li Y,Huang J,Lei M,He H,Wang J

更新日期：2019-09-01 00:00:00

abstract：:By taking advantage of the ballistoconidium-forming capabilities of members of the genus Sporobolomyces, we recovered ten isolates from deciduous tree leaves collected from Vermont and Washington, USA. Analysis of the small subunit ribosomal RNA gene and the D1/D2 domain of the large subunit ribosomal RNA gene indicat...

journal_title：MicrobiologyOpen

authors： Cobban A,Edgcomb VP,Burgaud G,Repeta D,Leadbetter ER

更新日期：2016-10-01 00:00:00

abstract：:Mannitol is the major compatible solute, next to glutamate, synthesized by the opportunistic human pathogen Acinetobacter baumannii under low water activities. The key enzyme for mannitol biosynthesis, MtlD, was identified. MtlD is highly similar to the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase from ...

journal_title：MicrobiologyOpen

authors： Zeidler S,Hubloher J,König P,Ngu ND,Scholz A,Averhoff B,Müller V

更新日期：2018-12-01 00:00:00

abstract：:Acinetobacter baumannii is a nosocomial pathogen which can persist in the hospital environment not only due to the acquirement of multiple antibiotic resistances, but also because of its exceptional resistance against disinfectants and desiccation. A suitable desiccation assay was established in which A. baumannii ATC...

journal_title：MicrobiologyOpen

authors： Zeidler S,Müller V

更新日期：2019-05-01 00:00:00

abstract：:Proteins are the most diverse structures on bacterial surfaces; hence, they are candidates for species- and strain-specific interactions of bacteria with the host, environment, and other microorganisms. Genomics has decoded thousands of bacterial surface and secreted proteins, yet the function of most cannot be predic...

journal_title：MicrobiologyOpen

authors： Gagic D,Wen W,Collett MA,Rakonjac J

更新日期：2013-02-01 00:00:00