Single florescent nanodiamond in a three dimensional ABEL trap.

Abstract:

:Three dimensional single particle trapping and manipulation is an outstanding challenge in various fields ranging from basic physics to life sciences. By monitoring the response of a trapped particle to a designed environment one can extract its characteristics. In addition, quantum dynamics of a spatially scanned well-known particle can provide environmental information. Precise tracking and positioning of such a particle in aqueous environment is crucial task for achieving nano-scale resolution. Here we experimentally demonstrate three dimensional ABEL trap operating at high frequency by employing a hybrid approach in particle tracking. The particle location in the transverse plane is detected via a scanning laser beam while the axial position is determined by defocused imaging. The scanning of the trapped particle is accomplished through a nano positioning stage integrated to the trap platform.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Kayci M,Radenovic A

doi

10.1038/srep16669

subject

Has Abstract

pub_date

2015-11-12 00:00:00

pages

16669

issn

2045-2322

pii

srep16669

journal_volume

5

pub_type

杂志文章
  • Evaluating phenotype-driven approaches for genetic diagnoses from exomes in a clinical setting.

    abstract::Next generation sequencing is transforming clinical medicine and genome research, providing a powerful route to establishing molecular diagnoses for genetic conditions; however, challenges remain given the volume and complexity of genetic variation. A number of methods integrate patient phenotype and genotypic data to...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-13841-y

    authors: Pengelly RJ,Alom T,Zhang Z,Hunt D,Ennis S,Collins A

    更新日期:2017-10-18 00:00:00

  • Silica bioreplication preserves three-dimensional spheroid structures of human pluripotent stem cells and HepG2 cells.

    abstract::Three-dimensional (3D) cell cultures produce more in vivo-like multicellular structures such as spheroids that cannot be obtained in two-dimensional (2D) cell cultures. Thus, they are increasingly employed as models for cancer and drug research, as well as tissue engineering. It has proven challenging to stabilize sph...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13635

    authors: Lou YR,Kanninen L,Kaehr B,Townson JL,Niklander J,Harjumäki R,Jeffrey Brinker C,Yliperttula M

    更新日期:2015-09-01 00:00:00

  • Analysis of Bioactive Amino Acids from Fish Hydrolysates with a New Bioinformatic Intelligent System Approach.

    abstract::The current economics of the fish protein industry demand rapid, accurate and expressive prediction algorithms at every step of protein production especially with the challenge of global climate change. This help to predict and analyze functional and nutritional quality then consequently control food allergies in hype...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10890-1

    authors: Elaziz MA,Hemdan AM,Hassanien A,Oliva D,Xiong S

    更新日期:2017-09-07 00:00:00

  • Gaining new insights into nanoporous gold by mining and analysis of published images.

    abstract::One way of expediting materials development is to decrease the need for new experiments by making greater use of published literature. Here, we use data mining and automated image analysis to gather new insights on nanoporous gold (NPG) without conducting additional experiments or simulations. NPG is a three-dimension...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25122-3

    authors: McCue I,Stuckner J,Murayama M,Demkowicz MJ

    更新日期:2018-04-30 00:00:00

  • Sox2 in the differentiation of cochlear progenitor cells.

    abstract::HMG domain transcription factor, Sox2, is a critical gene for the development of cochlear hair cells, the receptor cells for hearing, but this has been ascribed to expansion of the progenitors that become hair cells. Here, we show that Sox2 activated Atoh1, a transcription factor important for hair cell differentiatio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23293

    authors: Kempfle JS,Turban JL,Edge AS

    更新日期:2016-03-18 00:00:00

  • Precise Doppler shift compensation in the hipposiderid bat, Hipposideros armiger.

    abstract::Bats of the Rhinolophidae and Hipposideridae families, and Pteronotus parnellii, compensate for Doppler shifts generated by their own flight movement. They adjust their call frequency such that the frequency of echoes coming from ahead fall in a specialized frequency range of the hearing system, the auditory fovea, to...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-22880-y

    authors: Schoeppler D,Schnitzler HU,Denzinger A

    更新日期:2018-03-15 00:00:00

  • Arbuscular mycorrhizal enhancement of phosphorus uptake and yields of maize under high planting density in the black soil region of China.

    abstract::Arbuscular mycorrhizal (AM) symbioses are an attractive means of improving the efficiency of soil phosphorus (P) that difficult to be used by plants and may provide a sustainable way of maintaining high yields while reducing P applications. However, quantifying the contribution of indigenous AM fungi on phosphorus upt...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80074-x

    authors: Hou L,Zhang X,Feng G,Li Z,Zhang Y,Cao N

    更新日期:2021-01-13 00:00:00

  • Bleaching drives collapse in reef carbonate budgets and reef growth potential on southern Maldives reefs.

    abstract::Sea-surface temperature (SST) warming events, which are projected to increase in frequency and intensity with climate change, represent major threats to coral reefs. How these events impact reef carbonate budgets, and thus the capacity of reefs to sustain vertical growth under rising sea levels, remains poorly quantif...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep40581

    authors: Perry CT,Morgan KM

    更新日期:2017-01-13 00:00:00

  • Asymmetrical ligand-induced cross-regulation of chemokine (C-X-C motif) receptor 4 by α1-adrenergic receptors at the heteromeric receptor complex.

    abstract::Recently, we reported that chemokine (C-X-C motif) receptor (CXCR)4 and atypical chemokine receptor 3 regulate α1-adrenergic receptors (α1-AR) through the formation of hetero-oligomeric complexes. Whether α1-ARs also regulate chemokine receptor function within such heteromeric receptor complexes is unknown. We observe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21096-4

    authors: Gao X,Albee LJ,Volkman BF,Gaponenko V,Majetschak M

    更新日期:2018-02-09 00:00:00

  • Optical orbital angular momentum conservation during the transfer process from plasmonic vortex lens to light.

    abstract::We demonstrate the optical orbital angular momentum conservation during the transfer process from subwavelength plasmonic vortex lens (PVLs) to light and the generating process of surface plasmon polaritons (SPPs). Illuminating plasmonic vortex lenses with beams carrying optical orbital angular momentum, the SP vortic...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03191

    authors: Yu H,Zhang H,Wang Y,Han S,Yang H,Xu X,Wang Z,Petrov V,Wang J

    更新日期:2013-11-12 00:00:00

  • Mitochondrial DNA damage as a potential biomarker of LRRK2 kinase activity in LRRK2 Parkinson's disease.

    abstract::Leucine-rich repeat kinase 2 (LRRK2) is a promising therapeutic target for the treatment of Parkinson's disease (PD) and LRRK2 kinase inhibitors are currently being tested in early phase clinical trials. In order to ensure the highest chance of success, a biomarker-guided entry into clinical trials is key. LRRK2 phosp...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-74195-6

    authors: Gonzalez-Hunt CP,Thacker EA,Toste CM,Boularand S,Deprets S,Dubois L,Sanders LH

    更新日期:2020-10-14 00:00:00

  • Analysis of the dynamic co-expression network of heart regeneration in the zebrafish.

    abstract::The zebrafish has the capacity to regenerate its heart after severe injury. While the function of a few genes during this process has been studied, we are far from fully understanding how genes interact to coordinate heart regeneration. To enable systematic insights into this phenomenon, we generated and integrated a ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26822

    authors: Rodius S,Androsova G,Götz L,Liechti R,Crespo I,Merz S,Nazarov PV,de Klein N,Jeanty C,González-Rosa JM,Muller A,Bernardin F,Niclou SP,Vallar L,Mercader N,Ibberson M,Xenarios I,Azuaje F

    更新日期:2016-05-31 00:00:00

  • The Dependency of Nematic and Twist-bend Mesophase Formation on Bend Angle.

    abstract::We have prepared and studied a family of cyanobiphenyl dimers with varying linking groups with a view to exploring how molecular structure dictates the stability of the nematic and twist-bend nematic mesophases. Using molecular modelling and 1D 1H NOESY NMR spectroscopy, we determine the angle between the two aromatic...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep36682

    authors: Mandle RJ,Archbold CT,Sarju JP,Andrews JL,Goodby JW

    更新日期:2016-11-07 00:00:00

  • OsKinesin-13A is an active microtubule depolymerase involved in glume length regulation via affecting cell elongation.

    abstract::Grain size is an important trait influencing both the yield and quality of rice and its major determinant is glume size. However, how glume size is regulated remains largely unknown. Here, we report the characterization of OsKinesin-13A, which regulates cell elongation and glume length in rice. The mutant of OsKinesin...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep09457

    authors: Deng ZY,Liu LT,Li T,Yan S,Kuang BJ,Huang SJ,Yan CJ,Wang T

    更新日期:2015-03-25 00:00:00

  • Symbiotic cooperation between freshwater rock-boring bivalves and microorganisms promotes silicate bioerosion.

    abstract::Bioerosion is a process with a high socio-economic impact that contributes to coastal retreat, and likely to increase with climate change. Whereas limestone bioerosion is well explained by a combination of mechanical and chemical pathways, the bioerosion mechanisms of silicates, which are harder and chemically more re...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-70265-x

    authors: Daval D,Guyot F,Bolotov IN,Vikhrev IV,Kondakov AV,Lyubas AA,Bychkov AY,Yapaskurt VO,Cabié M,Pokrovsky OS

    更新日期:2020-08-07 00:00:00

  • Mechanistic insight into the substrate specificity of 1,2-β-oligoglucan phosphorylase from Lachnoclostridium phytofermentans.

    abstract::Glycoside phosphorylases catalyze the phosphorolysis of oligosaccharides into sugar phosphates. Recently, we found a novel phosphorylase acting on β-1,2-glucooligosaccharides with degrees of polymerization of 3 or more (1,2-β-oligoglucan phosphorylase, SOGP) in glycoside hydrolase family (GH) 94. Here, we characterize...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42671

    authors: Nakajima M,Tanaka N,Furukawa N,Nihira T,Kodutsumi Y,Takahashi Y,Sugimoto N,Miyanaga A,Fushinobu S,Taguchi H,Nakai H

    更新日期:2017-02-15 00:00:00

  • Ectodomain shedding of Limbic System-Associated Membrane Protein (LSAMP) by ADAM Metallopeptidases promotes neurite outgrowth in DRG neurons.

    abstract::IgLONs are members of the immunoglobulin superfamily of cell adhesion proteins implicated in the process of neuronal outgrowth, cell adhesion and subdomain target recognition. IgLONs form homophilic and heterophilic complexes on the cell surface that repress or promote growth depending on the neuronal population, the ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-08315-0

    authors: Sanz RL,Ferraro GB,Girouard MP,Fournier AE

    更新日期:2017-08-11 00:00:00

  • Landau damping effects in the synchronization of conformist and contrarian oscillators.

    abstract::Two decades ago, a phenomenon resembling Landau damping was described in the synchronization of globally coupled oscillators: the evidence of a regime where the order parameter decays when linear theory predicts neutral stability for the incoherent state. We here show that such an effect is far more generic, as soon a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep18235

    authors: Qiu T,Zhang Y,Liu J,Bi H,Boccaletti S,Liu Z,Guan S

    更新日期:2015-12-14 00:00:00

  • Mechanism of the antigen-independent cytokinergic SPE-7 IgE activation of human mast cells in vitro.

    abstract::Release of pro-inflammatory mediators by mast cells is a key feature of allergic disease. The 'dogma' is that IgE molecules merely sensitise mast cells by binding FcεRI prior to cross-linking by multivalent allergen, receptor aggregation and mast cell activation. However, certain monoclonal IgE antibodies have been sh...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep09538

    authors: Bax HJ,Bowen H,Dodev TS,Sutton BJ,Gould HJ

    更新日期:2015-04-20 00:00:00

  • Residual Monomer Content Affects the Interpretation of Plastic Degradation.

    abstract::Plastic degradation rates in the marine environment are essential to understand. This study demonstrates that in plastic-microbial interaction experiments, residual monomeric and oligomeric content of PA6 significantly influences the development of dissolved organic carbon. While it is well recognized that additives i...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-38685-6

    authors: Klaeger F,Tagg AS,Otto S,Bienmüller M,Sartorius I,Labrenz M

    更新日期:2019-02-14 00:00:00

  • Activated forms of astrocytes with higher GLT-1 expression are associated with cognitive normal subjects with Alzheimer pathology in human brain.

    abstract::Although the cognitive impairment in Alzheimer's disease (AD) is believed to be caused by amyloid-β (Aβ) plaques and neurofibrillary tangles (NFTs), several postmortem studies have reported cognitive normal subjects with AD brain pathology. As the mechanism underlying these discrepancies has not been clarified, we foc...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-19442-7

    authors: Kobayashi E,Nakano M,Kubota K,Himuro N,Mizoguchi S,Chikenji T,Otani M,Mizue Y,Nagaishi K,Fujimiya M

    更新日期:2018-01-26 00:00:00

  • Natural infection by Procyrnea uncinipenis (Nematoda, Habronematidae), a parasite from rheas, an autoctone bird from South America, in emus Dromaius novaehollandiae, a ratite from New Zealand.

    abstract::The present study reports a natural infection of emus, Dromaius novaehollandiae, by the nematode Procyrnea uncinipenis. Five adult emus from a scientific breeding farm at North Fluminense State University located in the city of Campos dos Goytacazes, Rio de Janeiro state, Brazil were necropsied, and their gastrointest...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-73754-1

    authors: Ederli NB,Gallo SSM,de Oliveira FCR

    更新日期:2020-10-06 00:00:00

  • Physico-chemical properties based differential toxicity of graphene oxide/reduced graphene oxide in human lung cells mediated through oxidative stress.

    abstract::Graphene derivatives (GD) are currently being evaluated for technological and biomedical applications owing to their unique physico-chemical properties over other carbon allotrope such as carbon nanotubes (CNTs). But, the possible association of their properties with underlying in vitro effects have not fully examined...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep39548

    authors: Mittal S,Kumar V,Dhiman N,Chauhan LK,Pasricha R,Pandey AK

    更新日期:2016-12-21 00:00:00

  • In vitro exposure of simulated meat-cooking fumes to assess adverse biological effects.

    abstract::The heterocyclic amine 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) is considered as a human carcinogenic or mutagenic compound that is produced from the co-condensation of creatinine and amino acids as meats cook at high temperatures. The cooking of meats at high temperatures produces fumes, and these fumes...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11502-8

    authors: Poudel BK,Choi J,Park JH,Doh KO,Byeon JH

    更新日期:2017-09-07 00:00:00

  • More than apples and oranges--detecting cancer with a fruit fly's antenna.

    abstract::Cancer cells and non-cancer cells differ in their metabolism and they emit distinct volatile compound profiles, allowing to recognise cancer cells by their scent. Insect odorant receptors are excellent chemosensors with high sensitivity and a broad receptive range unmatched by current gas sensors. We thus investigated...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03576

    authors: Strauch M,Lüdke A,Münch D,Laudes T,Galizia CG,Martinelli E,Lavra L,Paolesse R,Ulivieri A,Catini A,Capuano R,Di Natale C

    更新日期:2014-01-06 00:00:00

  • Potential Utilisation of Dark-Fermented Palm Oil Mill Effluent in Continuous Production of Biomethane by Self-Granulated Mixed Culture.

    abstract::Two-stage anaerobic digestion of palm oil mill effluent (POME) is a promising method for converting the waste from the largest agricultural industry in Southeast Asia into a clean and sustainable energy. This study investigates the degradation of acid-rich effluent from the dark fermentation stage for the production o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65702-w

    authors: Mahmod SS,Azahar AM,Luthfi AAI,Abdul PM,Mastar MS,Anuar N,Takriff MS,Jahim JMD

    更新日期:2020-06-08 00:00:00

  • Effects of bowel preparation on the human gut microbiome and metabolome.

    abstract::Large bowel preparation may cause a substantial change in the gut microbiota and metabolites. Here, we included a bowel prep group and a no-procedure control group and evaluated the effects of bowel prep on the stability of the gut microbiome and metabolome as well as on recovery. Gut microbiota and metabolome composi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40182-9

    authors: Nagata N,Tohya M,Fukuda S,Suda W,Nishijima S,Takeuchi F,Ohsugi M,Tsujimoto T,Nakamura T,Shimomura A,Yanagisawa N,Hisada Y,Watanabe K,Imbe K,Akiyama J,Mizokami M,Miyoshi-Akiyama T,Uemura N,Hattori M

    更新日期:2019-03-11 00:00:00

  • Simultaneous SPECT imaging of multi-targets to assist in identifying hepatic lesions.

    abstract::Molecular imaging technique is an attractive tool to detect liver disease at early stage. This study aims to develop a simultaneous dual-isotope single photon emission computed tomography (SPECT)/CT imaging method to assist diagnosis of hepatic tumor and liver fibrosis. Animal models of liver fibrosis and orthotopic h...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep28812

    authors: Guo Z,Gao M,Zhang D,Li Y,Song M,Zhuang R,Su X,Chen G,Liu T,Liu P,Wu H,Du J,Zhang X

    更新日期:2016-07-05 00:00:00

  • Cold tolerance and silencing of three cold-tolerance genes of overwintering Chinese white pine larvae.

    abstract::The values of physiological indices and the enzymes activities involved in the overwintering stage were studied in D. armandi larvae in each month from October 2014 to March 2015. The sorbitol, trehalose and glycerol values initially tended to increase as the ambient temperature decreased, before declining until the e...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34698

    authors: Wang J,Zhang RR,Gao GQ,Ma MY,Chen H

    更新日期:2016-10-05 00:00:00

  • Anti-proliferative and anti-migratory properties of coffee diterpenes kahweol acetate and cafestol in human renal cancer cells.

    abstract::Despite improvements in systemic therapy options for renal cancer, it remains one of the most drug-resistant malignancies. Interestingly, reports have shown that kahweol and cafestol, natural diterpenes extracted from coffee beans, exhibit anti-cancer activity. However, the multiple potential pharmacological actions o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80302-4

    authors: Makino T,Izumi K,Hiratsuka K,Kano H,Shimada T,Nakano T,Kadomoto S,Naito R,Iwamoto H,Yaegashi H,Shigehara K,Kadono Y,Nakata H,Saito Y,Nakagawa-Goto K,Sakai N,Iwata Y,Wada T,Mizokami A

    更新日期:2021-01-12 00:00:00