Aggregation propensities of superoxide dismutase G93 hotspot mutants mirror ALS clinical phenotypes.

Abstract:

:Protein framework alterations in heritable Cu, Zn superoxide dismutase (SOD) mutants cause misassembly and aggregation in cells affected by the motor neuron disease ALS. However, the mechanistic relationship between superoxide dismutase 1 (SOD1) mutations and human disease is controversial, with many hypotheses postulated for the propensity of specific SOD mutants to cause ALS. Here, we experimentally identify distinguishing attributes of ALS mutant SOD proteins that correlate with clinical severity by applying solution biophysical techniques to six ALS mutants at human SOD hotspot glycine 93. A small-angle X-ray scattering (SAXS) assay and other structural methods assessed aggregation propensity by defining the size and shape of fibrillar SOD aggregates after mild biochemical perturbations. Inductively coupled plasma MS quantified metal ion binding stoichiometry, and pulsed dipolar ESR spectroscopy evaluated the Cu(2+) binding site and defined cross-dimer copper-copper distance distributions. Importantly, we find that copper deficiency in these mutants promotes aggregation in a manner strikingly consistent with their clinical severities. G93 mutants seem to properly incorporate metal ions under physiological conditions when assisted by the copper chaperone but release copper under destabilizing conditions more readily than the WT enzyme. Altered intradimer flexibility in ALS mutants may cause differential metal retention and promote distinct aggregation trends observed for mutant proteins in vitro and in ALS patients. Combined biophysical and structural results test and link copper retention to the framework destabilization hypothesis as a unifying general mechanism for both SOD aggregation and ALS disease progression, with implications for disease severity and therapeutic intervention strategies.

authors

Pratt AJ,Shin DS,Merz GE,Rambo RP,Lancaster WA,Dyer KN,Borbat PP,Poole FL 2nd,Adams MW,Freed JH,Crane BR,Tainer JA,Getzoff ED

doi

10.1073/pnas.1308531111

subject

Has Abstract

pub_date

2014-10-28 00:00:00

pages

E4568-76

issue

43

eissn

0027-8424

issn

1091-6490

pii

1308531111

journal_volume

111

pub_type

杂志文章
  • Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case.

    abstract::DNA barcoding systems employ a short, standardized gene region to identify species. A 648-bp segment of mitochondrial cytochrome c oxidase 1 (CO1) is the core barcode region for animals, but its utility has not been tested in fungi. This study began with an examination of patterns of sequence divergences in this gene ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0611691104

    authors: Seifert KA,Samson RA,Dewaard JR,Houbraken J,Lévesque CA,Moncalvo JM,Louis-Seize G,Hebert PD

    更新日期:2007-03-06 00:00:00

  • How native-state topology affects the folding of dihydrofolate reductase and interleukin-1beta.

    abstract::The overall structure of the transition-state and intermediate ensembles observed experimentally for dihydrofolate reductase and interleukin-1beta can be obtained by using simplified models that have almost no energetic frustration. The predictive power of these models suggests that, even for these very large proteins...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.100547897

    authors: Clementi C,Jennings PA,Onuchic JN

    更新日期:2000-05-23 00:00:00

  • Synthesis of complementary RNA sequences during productive adenovirus infection.

    abstract::Liquid RNA.DNA hybridization with separated strands of adenovirus type 2 DNA revealed that late nuclear RNA can hybridize to about 85% of the 1-strand and 10-15% of the h-strand, whereas late cytoplasmic RNA hybridizes to 65-70% and 25% of the l- and h-strand, respectively. With separated strands from the six EcoRI fr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.71.12.4887

    authors: Pettersson U,Philipson L

    更新日期:1974-12-01 00:00:00

  • Supervillin associates with androgen receptor and modulates its transcriptional activity.

    abstract::Activation of androgen receptor (AR) via androgen in muscle cells has been closely linked to their growth and differentiation. Here, we report the cloning and characterization of supervillin (SV), a 205-kDa actin-binding protein, as an AR coregulator from the skeletal muscle cDNA library. Mammalian two-hybrid and glut...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.022469899

    authors: Ting HJ,Yeh S,Nishimura K,Chang C

    更新日期:2002-01-22 00:00:00

  • Peroxisomal β-oxidation regulates histone acetylation and DNA methylation in Arabidopsis.

    abstract::Epigenetic markers, such as histone acetylation and DNA methylation, determine chromatin organization. In eukaryotic cells, metabolites from organelles or the cytosol affect epigenetic modifications. However, the relationships between metabolites and epigenetic modifications are not well understood in plants. We found...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1904143116

    authors: Wang L,Wang C,Liu X,Cheng J,Li S,Zhu JK,Gong Z

    更新日期:2019-05-21 00:00:00

  • Specific inhibition of Trypanosoma cruzi neuraminidase by the human plasma glycoprotein "cruzin".

    abstract::Plasma of normal human individuals was shown to contain an inhibitor of Trypanosoma cruzi neuraminidase (NAase; acylneuraminyl hydrolase, sialidase, EC 3.2.1.18). The inhibitor has been purified to homogeneity by PEG precipitation, CM Affi-Gel Blue Sepharose chromatography, and gel filtration. The purified preparation...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.10.3097

    authors: Prioli RP,Rosenberg I,Pereira ME

    更新日期:1987-05-01 00:00:00

  • Bacterial origin recognition complexes direct assembly of higher-order DnaA oligomeric structures.

    abstract::Eukaryotic initiator proteins form origin recognition complexes (ORCs) that bind to replication origins during most of the cell cycle and direct assembly of prereplication complexes (pre-RCs) before the onset of S phase. In the eubacterium Escherichia coli, there is a temporally similar nucleoprotein complex comprisin...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0909472106

    authors: Miller DT,Grimwade JE,Betteridge T,Rozgaja T,Torgue JJ,Leonard AC

    更新日期:2009-11-03 00:00:00

  • Diversity enhances agricultural productivity via rhizosphere phosphorus facilitation on phosphorus-deficient soils.

    abstract::Intercropping, which grows at least two crop species on the same pieces of land at the same time, can increase grain yields greatly. Legume-grass intercrops are known to overyield because of legume nitrogen fixation. However, many agricultural soils are deficient in phosphorus. Here we show that a new mechanism of ove...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0704591104

    authors: Li L,Li SM,Sun JH,Zhou LL,Bao XG,Zhang HG,Zhang FS

    更新日期:2007-07-03 00:00:00

  • Search for deep slabs in the Northwest Pacific mantle.

    abstract::A residual sphere is formed by projecting seismic ray travel-time anomalies, relative to a reference Earth model, onto an imaginary sphere around an earthquake. Any dominant slab-like fast band can be determined with spherical harmonic expansion. The technique is useful in detecting trends associated with high-velocit...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.86.22.8602

    authors: Zhou HW,Anderson DL

    更新日期:1989-11-01 00:00:00

  • Exquisite sensitivity of adrenocortical carcinomas to induction of ferroptosis.

    abstract::Adrenocortical carcinomas (ACCs) are rare and highly malignant cancers associated with poor survival of patients. Currently, mitotane, a nonspecific derivative of the pesticide DDT (1,1-(dichlorobiphenyl)-2,2-dichloroethane), is used as the standard treatment, but its mechanism of action in ACCs remains elusive. Here ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1912700116

    authors: Belavgeni A,Bornstein SR,von Mässenhausen A,Tonnus W,Stumpf J,Meyer C,Othmar E,Latk M,Kanczkowski W,Kroiss M,Hantel C,Hugo C,Fassnacht M,Ziegler CG,Schally AV,Krone NP,Linkermann A

    更新日期:2019-10-29 00:00:00

  • gamma-Aminobutyric acid exerts a local inhibitory action on the axon terminal of bipolar cells: evidence for negative feedback from amacrine cells.

    abstract::It is well-established morphologically that bipolar cells, the second-order neurons in the vertebrate retina, make reciprocal synapses with amacrine cells in the inner plexiform layer. However, neither the property nor the physiological function of the feedback synapse is understood. Autoradiographic and immunohistoch...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.10.3501

    authors: Tachibana M,Kaneko A

    更新日期:1987-05-01 00:00:00

  • ATP-dependent Ca uptake into plant membrane vesicles.

    abstract::Membrane vesicles were extracted from etiolated and light-grown plants, a plant cell suspension culture, and an alga. Upon addition of ATP and Mg(2+), active Ca(2+) uptake into the vesicles against a concentration gradient was shown. The dependence of this uptake on ATP and Mg(2+) concentrations, pH, and temperature i...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.75.3.1232

    authors: Gross J,Marmé D

    更新日期:1978-03-01 00:00:00

  • The core trisaccharide of an N-linked glycoprotein intrinsically accelerates folding and enhances stability.

    abstract::The folding energetics of the mono-N-glycosylated adhesion domain of the human immune cell receptor cluster of differentiation 2 (hCD2ad) were studied systematically to understand the influence of the N-glycan on the folding energy landscape. Fully elaborated N-glycan structures accelerate folding by 4-fold and stabil...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0810318105

    authors: Hanson SR,Culyba EK,Hsu TL,Wong CH,Kelly JW,Powers ET

    更新日期:2009-03-03 00:00:00

  • A motion area in human visual cortex.

    abstract::We have localized an area in the human brain involved in the processing of contours defined by motion differences (kinetic contours) by comparing with positron emission tomography the regional cerebral blood flow in tasks performed with kinetic and luminance-defined gratings. These tasks included passive viewing, coun...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.92.4.993

    authors: Orban GA,Dupont P,De Bruyn B,Vogels R,Vandenberghe R,Mortelmans L

    更新日期:1995-02-14 00:00:00

  • Differential regulation of type III secretion and virulence genes in Bordetella pertussis and Bordetella bronchiseptica by a secreted anti-σ factor.

    abstract::The BvgAS phosphorelay regulates ∼10% of the annotated genomes of Bordetella pertussis and Bordetella bronchiseptica and controls their infectious cycles. The hierarchical organization of the regulatory network allows the integration of contextual signals to control all or specific subsets of BvgAS-regulated genes. He...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1600320113

    authors: Ahuja U,Shokeen B,Cheng N,Cho Y,Blum C,Coppola G,Miller JF

    更新日期:2016-03-01 00:00:00

  • A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element.

    abstract::The CRR1 (Copper Response Regulator) locus, required for both activating and repressing target genes of a copper- and hypoxia-sensing pathway in Chlamydomonas, encodes a 1,232-residue candidate transcription factor with a plant-specific DNA-binding domain named SBP, ankyrin repeats, and a C-terminal Cys-rich region, w...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0507693102

    authors: Kropat J,Tottey S,Birkenbihl RP,Depège N,Huijser P,Merchant S

    更新日期:2005-12-20 00:00:00

  • High-density lipoprotein receptor SCARB1 is required for carotenoid coloration in birds.

    abstract::Yellow, orange, and red coloration is a fundamental aspect of avian diversity and serves as an important signal in mate choice and aggressive interactions. This coloration is often produced through the deposition of diet-derived carotenoid pigments, yet the mechanisms of carotenoid uptake and transport are not well-un...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1700751114

    authors: Toomey MB,Lopes RJ,Araújo PM,Johnson JD,Gazda MA,Afonso S,Mota PG,Koch RE,Hill GE,Corbo JC,Carneiro M

    更新日期:2017-05-16 00:00:00

  • Positive association between population genetic differentiation and speciation rates in New World birds.

    abstract::An implicit assumption of speciation biology is that population differentiation is an important stage of evolutionary diversification, but its significance as a rate-limiting control on phylogenetic speciation dynamics remains largely untested. If population differentiation within a species is related to its speciatio...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1617397114

    authors: Harvey MG,Seeholzer GF,Smith BT,Rabosky DL,Cuervo AM,Brumfield RT

    更新日期:2017-06-13 00:00:00

  • Inactivation of DNA proofreading obviates the need for SOS induction in frameshift mutagenesis.

    abstract::Translesion synthesis at replication-blocking lesions requires the induction of proteins that are controlled by the SOS system in Escherichia coli. Of the proteins identified so far, UmuD', UmuC, and RecA* were shown to facilitate replication across UV-light-induced lesions, yielding both error-free and mutagenic tran...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.95.22.13114

    authors: Fuchs RP,Napolitano RL

    更新日期:1998-10-27 00:00:00

  • Expression and nucleotide sequence of a plasmid-determined divalent cation efflux system from Alcaligenes eutrophus.

    abstract::Resistance to cobalt, zinc, and cadmium specified by the czc determinant on plasmid pMOL30 in Alcaligenes eutrophus results from a cation efflux system. Five membrane-bound polypeptides that were expressed in Escherichia coli from this determinant under the control of a phage T7 promoter were assigned to four open rea...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.86.19.7351

    authors: Nies DH,Nies A,Chu L,Silver S

    更新日期:1989-10-01 00:00:00

  • Interaction of phalloidin with actin.

    abstract::Phalloidin, a toxic bicyclic peptide of rapid action from the toadstool, Amanita phalloides, gives rise to polymerization of G-actin to filamentous structures (Ph-actin) in a medium of low ionic strength. Ph-actin closely resembles the microfilaments found in liver membrane fractions (Ph-filaments) after in vivo or in...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.71.7.2803

    authors: Lengsfeld AM,Löw I,Wieland T,Dancker P,Hasselbach W

    更新日期:1974-07-01 00:00:00

  • Early experience is associated with the development of categorical representations for facial expressions of emotion.

    abstract::A fundamental issue in human development concerns how the young infant's ability to recognize emotional signals is acquired through both biological programming and learning factors. This issue is extremely difficult to investigate because of the variety of sensory experiences to which humans are exposed immediately af...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.142165999

    authors: Pollak SD,Kistler DJ

    更新日期:2002-06-25 00:00:00

  • Gene expression dynamics in the macrophage exhibit criticality.

    abstract::Cells are dynamical systems of biomolecular interactions that process information from their environment to mount diverse yet specific responses. A key property of many self-organized systems is that of criticality: a state of a system in which, on average, perturbations are neither dampened nor amplified, but are pro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0711525105

    authors: Nykter M,Price ND,Aldana M,Ramsey SA,Kauffman SA,Hood LE,Yli-Harja O,Shmulevich I

    更新日期:2008-02-12 00:00:00

  • Cloning and analysis of strong promoters is made possible by the downstream placement of a RNA termination signal.

    abstract::Downstream placement of a strong transcriptional termination signal has made possible the cloning of bacteriophage T5 promoters known to exhibit high signal strength. The cloning system constructed contains two easily assayable indicator functions whose expression is controlled by the integration of promoters and term...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.78.8.4936

    authors: Gentz R,Langner A,Chang AC,Cohen SN,Bujard H

    更新日期:1981-08-01 00:00:00

  • High-resolution imaging of the dynamic tumor cell vascular interface in transparent zebrafish.

    abstract::Cell metastasis is a highly dynamic process that occurs in multiple steps. Understanding this process has been limited by the inability to visualize tumor cell behavior in real time by using animal models. Here, we employ translucent zebrafish and high-resolution confocal microscopy to study how human cancer cells inv...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0703446104

    authors: Stoletov K,Montel V,Lester RD,Gonias SL,Klemke R

    更新日期:2007-10-30 00:00:00

  • Molecular ruler determines needle length for the Salmonella Spi-1 injectisome.

    abstract::The type-III secretion (T3S) systems of bacteria are part of self-assembling nanomachines: the bacterial flagellum that enables cells to propel themselves through liquid and across hydrated surfaces, and the injectisome that delivers pathogenic effector proteins into eukaryotic host cells. Although the flagellum and i...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1423492112

    authors: Wee DH,Hughes KT

    更新日期:2015-03-31 00:00:00

  • Lateral mobility of cytochrome c on intact mitochondrial membranes as determined by fluorescence redistribution after photobleaching.

    abstract::Lateral mobility of an active fluorescent derivative of cytochrome c on the membranes of giant mitochondria was measured by fluorescence redistribution after photobleaching. A diffusion coefficient of 1.6 X 10(-10) cm2/sec was determined for the labeled cytochrome c on inner mitochondrial membranes under conditions wh...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.79.22.6866

    authors: Hochman JH,Schindler M,Lee JG,Ferguson-Miller S

    更新日期:1982-11-01 00:00:00

  • The early phase of engraftment after murine blood cell transplantation is mediated by hematopoietic stem cells.

    abstract::Blood cells transplantation is largely replacing bone marrow transplantation because engraftment is more rapid. This accelerated engraftment is thought to be mediated by relatively mature committed hematopoietic progenitor cells. Herein, we have used a modified rhodamine (Rho) staining procedure to identify and purify...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.95.2.725

    authors: Zijlmans JM,Visser JW,Laterveer L,Kleiverda K,Heemskerk DP,Kluin PM,Willemze R,Fibbe WE

    更新日期:1998-01-20 00:00:00

  • Conduction-band-edge ionization thresholds of DNA components in aqueous solution.

    abstract::Numerous investigations have focused on DNA damage induced by ionizing radiation; however, photoionization threshold energies of nucleic acid components in aqueous solution are not known. Herein, data from gas-phase photoelectron experiments have been combined with results from self-consistent field and post-self-cons...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.95.10.5550

    authors: Fernando H,Papadantonakis GA,Kim NS,LeBreton PR

    更新日期:1998-05-12 00:00:00

  • Molecular basis of tactile specialization in the duck bill.

    abstract::Tactile-foraging ducks are specialist birds known for their touch-dependent feeding behavior. They use dabbling, straining, and filtering to find edible matter in murky water, relying on the sense of touch in their bill. Here, we present the molecular characterization of embryonic duck bill, which we show contains a h...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1708793114

    authors: Schneider ER,Anderson EO,Mastrotto M,Matson JD,Schulz VP,Gallagher PG,LaMotte RH,Gracheva EO,Bagriantsev SN

    更新日期:2017-12-05 00:00:00