Abstract:
:Methods for visualizing protein or nucleic acid motifs have traditionally relied upon residue frequencies to graphically scale character heights. We describe the pLogo, a motif visualization in which residue heights are scaled relative to their statistical significance. A pLogo generation tool is publicly available at http://plogo.uconn.edu/ and supports real-time conditional probability calculations and visualizations.
journal_name
Nat Methodsjournal_title
Nature methodsauthors
O'Shea JP,Chou MF,Quader SA,Ryan JK,Church GM,Schwartz Ddoi
10.1038/nmeth.2646subject
Has Abstractpub_date
2013-12-01 00:00:00pages
1211-2issue
12eissn
1548-7091issn
1548-7105pii
nmeth.2646journal_volume
10pub_type
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