Report of the Second European Zebrafish Principal Investigator Meeting in Karlsruhe, Germany, March 21-24, 2012.

Abstract:

:The second European Zebrafish Principal Investigator (PI) Meeting was held in March, 2012, in Karlsruhe, Germany. It brought together PIs from all over Europe who work with fish models such as zebrafish and medaka to discuss their latest results, as well as to resolve strategic issues faced by this research community. Scientific discussion ranged from the development of new technologies for working with fish models to progress in various fields of research such as injury and repair, disease models, and cell polarity and dynamics. This meeting also marked the establishment of the European Zebrafish Resource Centre (EZRC) at Karlsruhe that in the future will serve as an important focus and community resource for zebrafish- and medaka-based research.

journal_name

Zebrafish

journal_title

Zebrafish

authors

Cavodeassi F,Del Bene F,Fürthauer M,Grabher C,Herzog W,Lehtonen S,Linker C,Mercader N,Mikut R,Norton W,Strähle U,Tiso N,Foulkes NS

doi

10.1089/zeb.2012.0829

subject

Has Abstract

pub_date

2013-03-01 00:00:00

pages

119-23

issue

1

eissn

1545-8547

issn

1557-8542

journal_volume

10

pub_type

  • Low-cost aquatic lab animal holding system.

    abstract::We have constructed a low-cost aquatic animal holding system that provides an alternative to expensive, commercially available systems. Our flow-through system is especially useful for programs that are limited in space and funding. The easy assembly and maintenance of the system are advantages for the researchers who...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2006.0501

    authors: Hohn C,Petrie-Hanson L

    更新日期:2007-07-01 00:00:00

  • Influence of Long-Term Feeding Antibiotics on the Gut Health of Zebrafish.

    abstract::The use of antibiotics for anti-infection and growth promotion has caused the overuse of antibiotics in aquaculture. However, the benefit or risk of the long-term use of antibiotics on fish growth or health has not been fully addressed. In the present study, zebrafish were fed with sulfamethoxazole (SMX) or oxytetracy...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1526

    authors: Zhou L,Limbu SM,Qiao F,Du ZY,Zhang M

    更新日期:2018-08-01 00:00:00

  • A Simple Method for Immunohistochemical Staining of Zebrafish Brain Sections for c-fos Protein Expression.

    abstract::Immediate early genes (IEGs) are transcription factors whose own transcription is initiated rapidly, for example, in the brain in response to environmental stimuli. c-fos is an IEG often used as a marker of neuronal activation. c-fos mRNA expression has started to be quantified and localized in the zebrafish brain fol...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1147

    authors: Chatterjee D,Tran S,Shams S,Gerlai R

    更新日期:2015-12-01 00:00:00

  • Fasted zebrafish mimic genetic and physiological responses in mammals: a model for obesity and diabetes?

    abstract::With worldwide rates of obesity and type-II diabetes increasing, it is essential to identify and understand the mechanisms involved during nutrient absorption and fuel allocation. Recent studies demonstrate that nutrients (e.g., lipids and carbohydrates) play a major regulatory role in gene transcription of glycolytic...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2011.0702

    authors: Craig PM,Moon TW

    更新日期:2011-09-01 00:00:00

  • A Tol2 Gateway-Compatible Toolbox for the Study of the Nervous System and Neurodegenerative Disease.

    abstract::Currently there is a lack in fundamental understanding of disease progression of most neurodegenerative diseases, and, therefore, treatments and preventative measures are limited. Consequently, there is a great need for adaptable, yet robust model systems to both investigate elementary disease mechanisms and discover ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1321

    authors: Don EK,Formella I,Badrock AP,Hall TE,Morsch M,Hortle E,Hogan A,Chow S,Gwee SS,Stoddart JJ,Nicholson G,Chung R,Cole NJ

    更新日期:2017-02-01 00:00:00

  • Zebrafish in Brazilian Science: Scientific Production, Impact, and Collaboration.

    abstract::By means of scientometric indicators, this study investigated the characteristics of scientific production and research collaboration involving zebrafish (Danio rerio) in Brazilian Science indexed by the Web of Science (WoS). Citation data were collected from the WoS and data regarding Impact Factor (IF) were gathered...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1183

    authors: Gheno EM,Rosemberg DB,Souza DO,Calabró L

    更新日期:2016-06-01 00:00:00

  • A primer for morpholino use in zebrafish.

    abstract::Morpholino oligonucleotides are the most common anti-sense "knockdown" technique used in zebrafish (Danio rerio). This review discusses common practices for the design, preparation, and deployment of morpholinos in this vertebrate model system. Off-targeting effects of morpholinos are discussed as well as method to mi...

    journal_title:Zebrafish

    pub_type: 杂志文章,评审

    doi:10.1089/zeb.2008.0555

    authors: Bill BR,Petzold AM,Clark KJ,Schimmenti LA,Ekker SC

    更新日期:2009-03-01 00:00:00

  • An Open-Source Husbandry Repository.

    abstract::Electronic databases provide effective and efficient management of zebrafish colony operations, but commercially available options are expensive. In this study we have developed a free zebrafish management repository alternative using free Google applications. Husbandry information is logged into a Google Sheets-based...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2018.1583

    authors: LaCoursiere CM,Ullmann JFP,Poduri A

    更新日期:2018-12-01 00:00:00

  • Todralazine protects zebrafish from lethal effects of ionizing radiation: role of hematopoietic cell expansion.

    abstract::The Johns Hopkins Clinical Compound Library (JHCCL), a collection of Food and Drug Administration (FDA)-approved small molecules (1400), was screened in silico for identification of novel β2AR blockers and tested for hematopoietic stem cell (HSC) expansion and radioprotection in zebrafish embryos. Docking studies, fol...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2014.0992

    authors: Dimri M,Joshi J,Chakrabarti R,Sehgal N,Sureshbabu A,Kumar IP

    更新日期:2015-02-01 00:00:00

  • Proteomic Profiling of Zebrafish Challenged by Spring Viremia of Carp Virus Provides Insight into Skin Antiviral Response.

    abstract::Spring viremia of carp virus (SVCV) causes the skin hemorrhagic disease in cyprinid species, but its molecular mechanism of skin immune response remains unclear at the protein level. In the present study, the differential proteomics of the zebrafish (Danio rerio) skin in response to SVCV infection were examined by iso...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2019.1843

    authors: Liu R,Hu X,Lü A,Song Y,Lian Z,Sun J,Sung YY

    更新日期:2020-04-01 00:00:00

  • Materials for zebrafish research outreach activities in National Institute for Environmental Studies, Japan.

    abstract::To promote application of the fruits of zebrafish research, we need to cultivate understanding of the use of zebrafish not only in the research community but also among the general public. On Open Days at our institute, the National Institute for Environmental Studies (NIES), our zebrafish group exhibits our research ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2008.0565

    authors: Aoki Y

    更新日期:2009-06-01 00:00:00

  • Clove Oil and AQUI-S Efficacy for Zebrafish Embryo, Larva, and Adult Anesthesia.

    abstract::Since the use of the zebrafish Danio rerio genetic model organism within the scientific research community continues to grow rapidly, continued procedural refinement to support high-quality, reproducible research and improve animal welfare remains an important focus. As such, anesthesia remains one of the most frequen...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2019.1737

    authors: Ehrlich O,Karamalakis A,Krylov AJ,Dudczig S,Hassell KL,Jusuf PR

    更新日期:2019-10-01 00:00:00

  • Zebrafish (Danio rerio) as a Model for Understanding the Process of Caudal Fin Regeneration.

    abstract::After its introduction for scientific investigation in the 1950s, the cypriniform zebrafish, Danio rerio, has become a valuable model for the study of regenerative processes and mechanisms. Zebrafish exhibit epimorphic regeneration, in which a nondifferentiated cell mass formed after amputation is able to fully regene...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2020.1926

    authors: Lebedeva L,Zhumabayeva B,Gebauer T,Kisselev I,Aitasheva Z

    更新日期:2020-12-01 00:00:00

  • Direct Visualization of DNA Replication Dynamics in Zebrafish Cells.

    abstract::Spatiotemporal regulation of DNA replication in the S-phase nucleus has been extensively studied in mammalian cells because it is tightly coupled with the regulation of other nuclear processes such as transcription. However, little is known about the replication dynamics in nonmammalian cells. Here, we analyzed the DN...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1151

    authors: Kuriya K,Higashiyama E,Avşar-Ban E,Tamaru Y,Ogata S,Takebayashi S,Ogata M,Okumura K

    更新日期:2015-12-01 00:00:00

  • Chromosomal Diversification Higher Than Molecular Variation in Astyanax aff. fasciatus (Teleostei, Characidae).

    abstract::Comprising a large number of species, the genus Astyanax has been intensively studied by several approaches to elucidate its evolutionary relationships. Such studies have demonstrated that many nominal species are artificial clusters where distinct taxa are grouped under the same denomination. Astyanax aff. fasciatus ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1272

    authors: Kavalco KF,Pazza R,Brandão Kde O,Garcia C,Bertollo LA,de Almeida-Toledo LF

    更新日期:2016-08-01 00:00:00

  • LIMK1 and LIMK2 are important for metastatic behavior and tumor cell-induced angiogenesis of pancreatic cancer cells.

    abstract::The two LIM kinases (LIMKs) LIMK1 and LIMK2 are members of the PDZ/LIM family. These serine/threonine protein kinases are involved in actin cytoskeleton reorganization through phosphorylation and inactivation of ADF/cofilin. Different subcellular localizations of LIMK1 and LIMK2 suggest different functions. LIMK1 is i...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2009.0602

    authors: Vlecken DH,Bagowski CP

    更新日期:2009-12-01 00:00:00

  • Preliminary evidence of the contribution of the intestinal microflora to biotin supply in zebrafish Danio rerio (Hamilton-Buchanan).

    abstract::A study was conducted to preliminarily assess the contribution of the intestinal microflora to biotin supply in zebrafish. Biotin and avidin were added to three isonitrogenous and isocaloric purified diets to provide molar avidin: biotin ratios of 0:0 (basal diet), 0:1 (biotin-supplemented diet), and 120:0. Another di...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2011.0706

    authors: Yossa R,Sarker PK,Vandenberg GW

    更新日期:2011-12-01 00:00:00

  • Generalized estimating equation approach for analyzing the effects of metal-derived products on survival and hatching of zebrafish embryos.

    abstract::Zebrafish embryos are widely used as a model to monitor the effect of chemicals on their survival and hatching at different time epochs. This experimental design generates longitudinal data in which the observations for a given subject are correlated and they are statistically independent across the subjects. This par...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2013.0921

    authors: Aparna C,Sanjeev S,Ajit J,Shantaram K,Jayesh B,Suresh AK

    更新日期:2014-08-01 00:00:00

  • Standardized Welfare Terms for the Zebrafish Community.

    abstract::Managing the welfare of laboratory animals is critical to animal health, vital in the understanding of phenotypes created by treatment or genetic alteration and ensures compliance of regulations. Part of an animal welfare assessment is the requirement to record observations, ensuring all those responsible for the anim...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1248

    authors: Goodwin N,Karp NA,Blackledge S,Clark B,Keeble R,Kovacs C,Murray KN,Price M,Thompson P,Bussell J

    更新日期:2016-07-01 00:00:00

  • 10th European Zebrafish Meeting 2017, Budapest: Husbandry Workshop Summary.

    abstract::A husbandry workshop on July 3, 2017, at the 10th European Zebrafish Meeting in Budapest, Hungary (July 3-July 7, 2017), focused on the standardization, optimization, and streamlining of fish facility procedures. Standardization can be achieved for example by developing novel software and hardware tools, such as a fis...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1548

    authors: Oltová J,Barton C,Certal AC,Argenton F,Varga ZM

    更新日期:2018-04-01 00:00:00

  • Targeted overexpression of CKI-insensitive cyclin-dependent kinase 4 increases functional β-cell number through enhanced self-replication in zebrafish.

    abstract::β-Cells of the islet of Langerhans produce insulin to maintain glucose homeostasis. Self-replication of β-cells is the predominant mode of postnatal β-cell production in mammals, with about 20% of rodent β cells dividing in a 24-hour period. However, replicating β-cells are rare in adults. Induction of self-replicatio...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2012.0816

    authors: Li M,Maddison LA,Crees Z,Chen W

    更新日期:2013-06-01 00:00:00

  • Multiplex fluorescent in situ hybridization in zebrafish embryos using tyramide signal amplification.

    abstract::One of the strengths of the zebrafish is the ease with which in situ hybridization can be performed to determine spatial and temporal patterns of gene expression in whole embryos. Thus far, colorimetric detection methods are mainly used for these analyses. Here we describe a fluorescent in situ hybridization (FISH) pr...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2005.2.105

    authors: Clay H,Ramakrishnan L

    更新日期:2005-01-01 00:00:00

  • Karyotypic Divergence of Two Co-Occurring Species of Andean Climbing Catfishes (Siluriformes: Loricarioidei: Astroblepidae).

    abstract::The monotypic Astroblepidae fish family includes 81 species distributed along Central and Northern Andes in South America and Panamá in Central America; most aspects regarding its biology, taxonomy, and chromosomal features remain largely unknown. This study reports the karyotype of two sympatric Astroblepus species f...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2018.1659

    authors: Conde-Saldaña CC,Cunha MS,Albornoz-Garzón JG,Barreto CAV,Ibagón N,Villa-Navarro FA,Dergam JA

    更新日期:2019-02-01 00:00:00

  • Intestinal Transit Time and Cortisol-Mediated Stress in Zebrafish.

    abstract::Intestinal motility, the spontaneous and rhythmic smooth muscle contraction, is a complex process that is regulated by overlapping and redundant regulatory mechanisms. Primary regulators intrinsic to the gastrointestinal tract include interstitial cells of Cajal, enteric neurons, and smooth muscle cells. Extrinsic pri...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1440

    authors: Brady C,Denora M,Shannon I,Clark KJ,Rich A

    更新日期:2017-10-01 00:00:00

  • Zebrafish in the tropical One-North.

    abstract::The zebrafish had landed in Singapore as an ornamental fish long before it became a fashionable model of scientific research. By the early 1990s, however, it became a part of the local scientific landscape. During the past decade the number of groups using zebrafish as a research model increased dramatically. In June ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2005.1.327

    authors: You MS,Korzh V

    更新日期:2005-01-01 00:00:00

  • Color Preference in Danio rerio: Effects of Age and Anxiolytic Treatments.

    abstract::Zebrafish are increasingly used in neurobiological and behavioral studies. Possible stimuli to manipulate zebrafish behavior are being investigated. The presentation of colors appears to be one of the most used approaches, but there is much debate about the exact color preference. Here we have investigated the color p...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1150

    authors: Peeters BW,Moeskops M,Veenvliet AR

    更新日期:2016-08-01 00:00:00

  • Reducing the noise in behavioral assays: sex and age in adult zebrafish locomotion.

    abstract::Many assays are used in animal model systems to measure specific human disease-related behaviors. The use of both adult and larval zebrafish as a behavioral model is gaining popularity. As this work progresses and potentially translates into new treatments, we must do our best to improve the sensitivity of these assay...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2012.0764

    authors: Philpott C,Donack CJ,Cousin MA,Pierret C

    更新日期:2012-12-01 00:00:00

  • CRISPR Guide RNA Validation In Vitro.

    abstract::Clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 has been applied to edit genomes in a wide variety of model systems. Although this process can be quite efficient, editing at precise locations in the genome remains difficult without a suitable single guide RNA (sgRNA). We have developed a method...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1358

    authors: Grainger S,Lonquich B,Oon CH,Nguyen N,Willert K,Traver D

    更新日期:2017-08-01 00:00:00

  • Methods for culturing saltwater rotifers (Brachionus plicatilis) for rearing larval zebrafish.

    abstract::The saltwater rotifer, Brachionus plicatilis, is widely used in the aquaculture industry as a prey item for first-feeding fishes due to its ease of culture, small size, rapid reproductive rate, and amenability to enrichment with nutrients. Despite the distinct advantages of this approach, rotifers have only been spora...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2012.0771

    authors: Lawrence C,Sanders E,Henry E

    更新日期:2012-09-01 00:00:00

  • The zebrafish embryo: a powerful model system for investigating matrix remodeling.

    abstract::Extracellular matrix (ECM) remodeling is a process that is crucial to the development of embryos, the growth and metastasis of tumors, and wound healing and homeostasis of tissues in adults. As such, it involves dozens of gene products that are regulated by mechanisms operating at transcriptional and multiple posttran...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2009.0609

    authors: Wyatt RA,Keow JY,Harris ND,Haché CA,Li DH,Crawford BD

    更新日期:2009-12-01 00:00:00