Zebrafish (Danio rerio) as a Model for Understanding the Process of Caudal Fin Regeneration.

Abstract:

:After its introduction for scientific investigation in the 1950s, the cypriniform zebrafish, Danio rerio, has become a valuable model for the study of regenerative processes and mechanisms. Zebrafish exhibit epimorphic regeneration, in which a nondifferentiated cell mass formed after amputation is able to fully regenerate lost tissue such as limbs, heart muscle, brain, retina, and spinal cord. The process of limb regeneration in zebrafish comprises several stages characterized by the activation of specific signaling pathways and gene expression. We review current research on key factors in limb regeneration using zebrafish as a model.

journal_name

Zebrafish

journal_title

Zebrafish

authors

Lebedeva L,Zhumabayeva B,Gebauer T,Kisselev I,Aitasheva Z

doi

10.1089/zeb.2020.1926

subject

Has Abstract

pub_date

2020-12-01 00:00:00

pages

359-372

issue

6

eissn

1545-8547

issn

1557-8542

journal_volume

17

pub_type

杂志文章
  • Cryptic speciation within the Neotropical cichlid Geophagus brasiliensis (Quoy & Gaimard, 1824) (Teleostei Cichlidae): a new paradigm in karyotypical and molecular evolution.

    abstract::The family Cichlidae is one of the most species-rich taxa in the Neotropics. However, the factors that determine these high levels of biodiversity remain unexplored. We have analyzed the morphological, cytogenetic, and molecular data from 62 specimens of a widespread cichlid, Geophagus brasiliensis, from three adjacen...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2014.0999

    authors: Alves-Silva AP,Dergam JA

    更新日期:2015-02-01 00:00:00

  • An interview with Manfred Schartl, Ph.D. Interview by Vicki Glaser.

    abstract::Dr. Manfred Schartl is Professor in the Department of Physiological Chemistry at the Biocenter of the University of Würzburg, Germany and Adjunct Professor for Experimental Cancer Research at the University of Bergen, Norway. He pursued undergraduate studies in biology and graduate work at the University of Giebetaen,...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2004.1.77

    authors: Schartl M

    更新日期:2004-01-01 00:00:00

  • Zebrafish in Brazilian Science: Scientific Production, Impact, and Collaboration.

    abstract::By means of scientometric indicators, this study investigated the characteristics of scientific production and research collaboration involving zebrafish (Danio rerio) in Brazilian Science indexed by the Web of Science (WoS). Citation data were collected from the WoS and data regarding Impact Factor (IF) were gathered...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1183

    authors: Gheno EM,Rosemberg DB,Souza DO,Calabró L

    更新日期:2016-06-01 00:00:00

  • Visual behavior in zebrafish.

    abstract::The zebrafish mainly uses the sense of light to hunt for food and avoid predators. This reliance on vision necessitates the rapid development of the visual system. Therefore the early larva already exhibits a number of visually- mediated behaviors that can be used for a genetic analysis of vision. The present article ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2006.3.191

    authors: Fleisch VC,Neuhauss SC

    更新日期:2006-01-01 00:00:00

  • Molecular Clock as Insight to Estimate the Evolutionary History and Times of Divergence for 10 Nominal Astyanax Species (Characiformes, Characidae): An Evolutionary Approach in Species with 2n = 36, 46, 48, and 50 Chromosomes.

    abstract::Astyanax is a genus with a wide distribution ranging from the south United States to north of Patagonia (Argentina). The available cytogenetic data on Astyanax indicate a high karyotypic diversity, with diploid number of 36-52 chromosomes, presence of B chromosomes, heterochromatin polymorphism, and variations with re...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2018.1647

    authors: Piscor D,Pozzobon APB,Fernandes CA,Centofante L,Parise-Maltempi PP

    更新日期:2019-02-01 00:00:00

  • 10th European Zebrafish Meeting 2017, Budapest: Husbandry Workshop Summary.

    abstract::A husbandry workshop on July 3, 2017, at the 10th European Zebrafish Meeting in Budapest, Hungary (July 3-July 7, 2017), focused on the standardization, optimization, and streamlining of fish facility procedures. Standardization can be achieved for example by developing novel software and hardware tools, such as a fis...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1548

    authors: Oltová J,Barton C,Certal AC,Argenton F,Varga ZM

    更新日期:2018-04-01 00:00:00

  • Chromosomal Diversification Higher Than Molecular Variation in Astyanax aff. fasciatus (Teleostei, Characidae).

    abstract::Comprising a large number of species, the genus Astyanax has been intensively studied by several approaches to elucidate its evolutionary relationships. Such studies have demonstrated that many nominal species are artificial clusters where distinct taxa are grouped under the same denomination. Astyanax aff. fasciatus ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1272

    authors: Kavalco KF,Pazza R,Brandão Kde O,Garcia C,Bertollo LA,de Almeida-Toledo LF

    更新日期:2016-08-01 00:00:00

  • Direct Visualization of DNA Replication Dynamics in Zebrafish Cells.

    abstract::Spatiotemporal regulation of DNA replication in the S-phase nucleus has been extensively studied in mammalian cells because it is tightly coupled with the regulation of other nuclear processes such as transcription. However, little is known about the replication dynamics in nonmammalian cells. Here, we analyzed the DN...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1151

    authors: Kuriya K,Higashiyama E,Avşar-Ban E,Tamaru Y,Ogata S,Takebayashi S,Ogata M,Okumura K

    更新日期:2015-12-01 00:00:00

  • Materials for zebrafish research outreach activities in National Institute for Environmental Studies, Japan.

    abstract::To promote application of the fruits of zebrafish research, we need to cultivate understanding of the use of zebrafish not only in the research community but also among the general public. On Open Days at our institute, the National Institute for Environmental Studies (NIES), our zebrafish group exhibits our research ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2008.0565

    authors: Aoki Y

    更新日期:2009-06-01 00:00:00

  • Exploring differential gene expression in zebrafish to teach basic molecular biology skills.

    abstract::In an effort to engage students in original research while teaching them basic molecular biology skills, we have designed a course for upper level undergraduate students and beginning graduate students that employs in situ hybridization in whole-mount zebrafish embryos to explore the concept of differential gene regul...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2008.0574

    authors: Schmoldt A,Forecki J,Hammond DR,Udvadia AJ

    更新日期:2009-06-01 00:00:00

  • Germplasm cryobanking in zebrafish and other aquarium model species.

    abstract::During the last few years zebrafish and other aquarium fish have become more important model system species. In zebrafish valuable biotechnological lines are constantly emerging, and the creation of cryobanks of viable fish sperm, oocytes, and embryos from those lines is a constant and important demand. Cryopreservati...

    journal_title:Zebrafish

    pub_type: 杂志文章,评审

    doi:10.1089/zeb.2009.0592

    authors: Robles V,Cabrita E,Herráez MP

    更新日期:2009-09-01 00:00:00

  • Comparative Developmental Toxicity and Stress Protein Responses of Dimethyl Sulfoxide to Rare Minnow and Zebrafish Embryos/Larvae.

    abstract::Dimethyl sulfoxide (DMSO), a widely used carrier solvent, can be toxic to test organisms and has species-specific sensitivity. In this study, the developmental toxicity and stress protein responses of DMSO to rare minnow (Gobiocypris rarus) and zebrafish (Danio rerio) with two tests were compared in the early life sta...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1287

    authors: Xiong X,Luo S,Wu B,Wang J

    更新日期:2017-02-01 00:00:00

  • LIMK1 and LIMK2 are important for metastatic behavior and tumor cell-induced angiogenesis of pancreatic cancer cells.

    abstract::The two LIM kinases (LIMKs) LIMK1 and LIMK2 are members of the PDZ/LIM family. These serine/threonine protein kinases are involved in actin cytoskeleton reorganization through phosphorylation and inactivation of ADF/cofilin. Different subcellular localizations of LIMK1 and LIMK2 suggest different functions. LIMK1 is i...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2009.0602

    authors: Vlecken DH,Bagowski CP

    更新日期:2009-12-01 00:00:00

  • Zebrafish Transcription Factor ORFeome for Gene Discovery and Regulatory Network Elucidation.

    abstract::The completion of the zebrafish genome sequence and advances in miniaturization and multiplexing were essential to the creation of techniques such as RNA-seq, ChIP-seq, and high-throughput behavioral and chemical screens. Multiplexing was also instrumental in the recent enhancement of the classic yeast one-hybrid inte...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1486

    authors: King J,Foster J,Davison JM,Rawls JF,Breton G

    更新日期:2018-04-01 00:00:00

  • Standardized Welfare Terms for the Zebrafish Community.

    abstract::Managing the welfare of laboratory animals is critical to animal health, vital in the understanding of phenotypes created by treatment or genetic alteration and ensures compliance of regulations. Part of an animal welfare assessment is the requirement to record observations, ensuring all those responsible for the anim...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2016.1248

    authors: Goodwin N,Karp NA,Blackledge S,Clark B,Keeble R,Kovacs C,Murray KN,Price M,Thompson P,Bussell J

    更新日期:2016-07-01 00:00:00

  • Cancer cytogenetics in the zebrafish.

    abstract::The zebrafish system has been established as a useful model for the study of carcinogenesis. The cytogenetic characterization of the genome is vital for furthering our understanding of the progression of the disease. Establishing a basic description of the zebrafish chromosomal karyotype and markers for each specific ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2009.0600

    authors: Peterson SM,Freeman JL

    更新日期:2009-12-01 00:00:00

  • A Fluorescence-Based Assay for Proteinuria Screening in Larval Zebrafish (Danio rerio).

    abstract::Analysis of genes compromising the glomerular filtration barrier in rodent models using transgenic or knockdown approaches is time- and resource-consuming and often leads to unsatisfactory results. Therefore, it would be beneficial to have a selection tool indicating that your gene of interest is in fact associated wi...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1093

    authors: Hanke N,King BL,Vaske B,Haller H,Schiffer M

    更新日期:2015-10-01 00:00:00

  • Zebrafish Embryo Disinfection with Povidone-Iodine: Evaluating an Alternative to Chlorine Bleach.

    abstract::Mycobacteriosis is a common bacterial infection in laboratory zebrafish caused by several different species and strains of Mycobacterium, including both rapid and slow growers. One control measure used to prevent mycobacterial spread within and between facilities is surface disinfection of eggs. Recent studies have hi...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1229

    authors: Chang CT,Amack JD,Whipps CM

    更新日期:2016-07-01 00:00:00

  • Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond.

    abstract::Zebrafish (Danio rerio) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the ...

    journal_title:Zebrafish

    pub_type: 杂志文章,评审

    doi:10.1089/zeb.2012.0861

    authors: Kalueff AV,Gebhardt M,Stewart AM,Cachat JM,Brimmer M,Chawla JS,Craddock C,Kyzar EJ,Roth A,Landsman S,Gaikwad S,Robinson K,Baatrup E,Tierney K,Shamchuk A,Norton W,Miller N,Nicolson T,Braubach O,Gilman CP,Pittman J

    更新日期:2013-03-01 00:00:00

  • Reducing the noise in behavioral assays: sex and age in adult zebrafish locomotion.

    abstract::Many assays are used in animal model systems to measure specific human disease-related behaviors. The use of both adult and larval zebrafish as a behavioral model is gaining popularity. As this work progresses and potentially translates into new treatments, we must do our best to improve the sensitivity of these assay...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2012.0764

    authors: Philpott C,Donack CJ,Cousin MA,Pierret C

    更新日期:2012-12-01 00:00:00

  • Fasted zebrafish mimic genetic and physiological responses in mammals: a model for obesity and diabetes?

    abstract::With worldwide rates of obesity and type-II diabetes increasing, it is essential to identify and understand the mechanisms involved during nutrient absorption and fuel allocation. Recent studies demonstrate that nutrients (e.g., lipids and carbohydrates) play a major regulatory role in gene transcription of glycolytic...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2011.0702

    authors: Craig PM,Moon TW

    更新日期:2011-09-01 00:00:00

  • Soybean Meal and Soy Protein Concentrate in Early Diet Elicit Different Nutritional Programming Effects on Juvenile Zebrafish.

    abstract::There is now strong evidence that early nutrition plays an important role in shaping later physiology. We assessed here whether soy protein concentrate (SPC) or soybean meal (SBM) in early diet would modify zebrafish responses to these products in later life. We fed zebrafish larvae with SPC-, SBM-, or a control-diet ...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1131

    authors: Perera E,Yúfera M

    更新日期:2016-02-01 00:00:00

  • Intestinal Transit Time and Cortisol-Mediated Stress in Zebrafish.

    abstract::Intestinal motility, the spontaneous and rhythmic smooth muscle contraction, is a complex process that is regulated by overlapping and redundant regulatory mechanisms. Primary regulators intrinsic to the gastrointestinal tract include interstitial cells of Cajal, enteric neurons, and smooth muscle cells. Extrinsic pri...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1440

    authors: Brady C,Denora M,Shannon I,Clark KJ,Rich A

    更新日期:2017-10-01 00:00:00

  • Influence of Long-Term Feeding Antibiotics on the Gut Health of Zebrafish.

    abstract::The use of antibiotics for anti-infection and growth promotion has caused the overuse of antibiotics in aquaculture. However, the benefit or risk of the long-term use of antibiotics on fish growth or health has not been fully addressed. In the present study, zebrafish were fed with sulfamethoxazole (SMX) or oxytetracy...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2017.1526

    authors: Zhou L,Limbu SM,Qiao F,Du ZY,Zhang M

    更新日期:2018-08-01 00:00:00

  • Production of F₁ offspring with vitrified sperm from a live-bearing fish, the green swordtail Xiphophorus hellerii.

    abstract::This study reports the first production of offspring with vitrified sperm from a live-bearing fish Xiphophorus hellerii. The overall goal of this study was to develop streamlined protocols for integration into a standardized approach for vitrification of aquatic species germplasm. The objectives were to (1) estimate a...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2011.0704

    authors: Cuevas-Uribe R,Yang H,Daly J,Savage MG,Walter RB,Tiersch TR

    更新日期:2011-12-01 00:00:00

  • Zebrafish Social Behavior in the Wild.

    abstract::Wild zebrafish exhibit a wide range of behavior. We found abundant wild zebrafish in flowing rivers and still water, in large, tightly-knit groups of hundreds of individuals, as well as in small, loose shoals. In two still-water populations, zebrafish were quite small in body size, common, and in tight groups of up to...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1159

    authors: Suriyampola PS,Shelton DS,Shukla R,Roy T,Bhat A,Martins EP

    更新日期:2016-02-01 00:00:00

  • Using zebrafish to learn statistical analysis and Mendelian genetics.

    abstract::This project was developed to promote understanding of how mathematics and statistical analysis are used as tools in genetic research. It gives students the opportunity to carry out hypothesis-driven experiments in the classroom: students generate hypotheses about Mendelian and non-Mendelian inheritance patterns, gath...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2010.0686

    authors: Lindemann S,Senkler J,Auchter E,Liang JO

    更新日期:2011-06-01 00:00:00

  • Winding roots of Wnts.

    abstract::Several factors contributed to the discovery of Wnt genes. On the one hand, the development of research tools in mammalian genetics such as mouse strains with high incidence of cancer in 1920-1930s led to discovery of the mouse mammary tumor virus in 1949. This virus in turn was used in 1982 to identify int-1 (Wnt1) i...

    journal_title:Zebrafish

    pub_type: 历史文章,杂志文章,评审

    doi:10.1089/zeb.2008.0532

    authors: Korzh V

    更新日期:2008-09-01 00:00:00

  • A Simple Method for Immunohistochemical Staining of Zebrafish Brain Sections for c-fos Protein Expression.

    abstract::Immediate early genes (IEGs) are transcription factors whose own transcription is initiated rapidly, for example, in the brain in response to environmental stimuli. c-fos is an IEG often used as a marker of neuronal activation. c-fos mRNA expression has started to be quantified and localized in the zebrafish brain fol...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1147

    authors: Chatterjee D,Tran S,Shams S,Gerlai R

    更新日期:2015-12-01 00:00:00

  • Color Preference in Danio rerio: Effects of Age and Anxiolytic Treatments.

    abstract::Zebrafish are increasingly used in neurobiological and behavioral studies. Possible stimuli to manipulate zebrafish behavior are being investigated. The presentation of colors appears to be one of the most used approaches, but there is much debate about the exact color preference. Here we have investigated the color p...

    journal_title:Zebrafish

    pub_type: 杂志文章

    doi:10.1089/zeb.2015.1150

    authors: Peeters BW,Moeskops M,Veenvliet AR

    更新日期:2016-08-01 00:00:00