An algorithmic approach for breakage-fusion-bridge detection in tumor genomes.

abstract：:Phagocytic cells are a critical line of defense against infection. The ability of a pathogen to survive and even replicate within phagocytic cells is a potent method of evading the defense mechanisms of the host. A number of pathogens survive within macrophages after phagocytosis and this contributes to their virulenc...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lindgren SW,Stojiljkovic I,Heffron F

更新日期：1996-04-30 00:00:00

abstract：:The detrimental effects of elevated intensities of mid-UV radiation (UVB), a result of stratospheric ozone depletion during the austral spring, on the primary producers of the Antarctic marine ecosystem have been well documented. Here we report that natural populations of Antarctic zooplankton also sustain significant...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Malloy KD,Holman MA,Mitchell D,Detrich HW 3rd

更新日期：1997-02-18 00:00:00

abstract：:The compact steep-spectrum sources (CSSs) are an interesting class of objects which are of subgalactic dimensions; they occur more frequently in high-frequency surveys because their spectra often turn over at lower frequencies. We have estimated the symmetry parameters of a well-defined sample of CSSs and compared the...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Saikia DJ

更新日期：1995-12-05 00:00:00

abstract：:The regulation of cellular protein levels is a complex process involving many regulatory mechanisms, each introducing stochastic events, leading to variability of protein levels between isogenic cells. Previous studies have shown that perturbing genes involved in transcription regulation affects the amount of cell-to-...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rinott R,Jaimovich A,Friedman N

更新日期：2011-04-12 00:00:00

abstract：:Communication about prescription drugs ought to be a paragon of public science communication. Unfortunately, it is not. Consumers see $4 billion of direct-to-consumer advertising annually, which typically fails to present data about how well drugs work. The professional label--the Food and Drug Administration's (FDA) ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Schwartz LM,Woloshin S

更新日期：2013-08-20 00:00:00

abstract：:Profilin1, a ubiquitously expressed actin-binding protein, plays a critical role in cell migration through actin cytoskeletal regulation. Given the traditional view of profilin1 as a promigratory molecule, it is difficult to reconcile observations that profilin1 is down-regulated in various invasive adenocarcinomas an...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bae YH,Ding Z,Das T,Wells A,Gertler F,Roy P

更新日期：2010-12-14 00:00:00

abstract：:Higher-level cognitive processes strongly depend on a complex interplay between mediodorsal thalamus nuclei and the prefrontal cortex (PFC). Alteration of thalamofrontal connectivity has been involved in cognitive deficits of schizophrenia. Prefrontal serotonin (5-HT)2A receptors play an essential role in cortical net...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Barre A,Berthoux C,De Bundel D,Valjent E,Bockaert J,Marin P,Bécamel C

更新日期：2016-03-08 00:00:00

abstract：:We measured the ortho-para conversion rate in solid hydrogen by using Raman scattering in a diamond-anvil cell, extending previous measurements by a factor of 60 in pressure. We confirm previous experiments that suggested a decrease in the conversion rate above about 0.5 GPa. We observe a distinct minimum at 3 GPa fol...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Eggert JH,Karmon E,Hemley RJ,Mao A,Goncharov AF

更新日期：1999-10-26 00:00:00

abstract：:We discuss the generic time behavior of reaction-diffusion processes capable of modeling various types of biological transport processes, such as ligand migration in proteins and gating fluctuations in ion channel proteins. The main observable in these two cases, the fraction of unbound ligands and the probability of ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nadler W,Stein DL

更新日期：1991-08-01 00:00:00

abstract：:In the troposphere, methanol (CH3OH) is present ubiquitously and second in abundance among organic gases after methane. In the surface ocean, methanol represents a supply of energy and carbon for marine microbes. Here we report direct measurements of air-sea methanol transfer along a ∼10,000-km north-south transect of...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yang M,Nightingale PD,Beale R,Liss PS,Blomquist B,Fairall C

更新日期：2013-12-10 00:00:00

abstract：:Combined effects of two drugs present simultaneously are usually expressed as summation, synergism or potentiation, and antagonism. When the sum of the effects of each drug present separately equals the combined effect of the two drugs present simultaneously, the action is called additive or summation. However, the ex...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kamaya H,Ueda I,Eyring H

更新日期：1976-06-01 00:00:00

abstract：:Chronic sleep deprivation perturbs the circadian clock and increases susceptibility to diseases such as diabetes, obesity, and cancer. Increased inflammation is one of the common underlying mechanisms of these diseases, thus raising a hypothesis that circadian-oscillator components may regulate immune response. Here w...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Narasimamurthy R,Hatori M,Nayak SK,Liu F,Panda S,Verma IM

更新日期：2012-07-31 00:00:00

abstract：:Neonicotinoid insecticides control crop pests based on their action as agonists at the insect nicotinic acetylcholine receptor, which accepts chloropyridinyl- and chlorothiazolyl-analogs almost equally well. In some cases, these compounds have also been reported to enhance plant vigor and (a)biotic stress tolerance, i...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ford KA,Casida JE,Chandran D,Gulevich AG,Okrent RA,Durkin KA,Sarpong R,Bunnelle EM,Wildermuth MC

更新日期：2010-10-12 00:00:00

abstract：:RAG1 and RAG2 are lymphoid-specific genes that together induce V(D)J recombinase activity in a variety of nonlymphoid cell types. While no other lymphoid-specific factors are required to induce recombination, other factors with more widespread expression patterns have been implicated in the reaction. However, none of ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cuomo CA,Kirch SA,Gyuris J,Brent R,Oettinger MA

更新日期：1994-06-21 00:00:00

abstract：:The nucleosomal repeat lengths of bulk chromatin and the chromatin of transcriptionally active and inactive genes were analyzed in two mouse cell lines and adult mouse spleens. The adult beta-globin gene exhibits a nucleosomal repeat length approximately 11 base pairs longer than (i) an inactive embryonic globin gene,...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Smith RD,Seale RL,Yu J

更新日期：1983-09-01 00:00:00

abstract：:Experimental observations of unexpected shear rigidity in confined liquids, on very low frequency scales on the order of 0.01 to 0.1 Hz, call into question our basic understanding of the elasticity of liquids and have posed a challenge to theoretical models of the liquid state ever since. Here we combine the nonaffine...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zaccone A,Trachenko K

更新日期：2020-08-18 00:00:00

abstract：:Unlike other predators that use vision as their primary sensory system, bats compute the three-dimensional (3D) position of flying insects from discrete echo snapshots, which raises questions about the strategies they employ to track and intercept erratically moving prey from interrupted sensory information. Here, we ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Salles A,Diebold CA,Moss CF

更新日期：2020-11-17 00:00:00

abstract：:The function of many of the uncharacterized open reading frames discovered by genomic sequencing can be determined at the level of expressed gene products, the proteome. However, identifying the cognate gene from minute amounts of protein has been one of the major problems in molecular biology. Using yeast as an examp...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Shevchenko A,Jensen ON,Podtelejnikov AV,Sagliocco F,Wilm M,Vorm O,Mortensen P,Shevchenko A,Boucherie H,Mann M

更新日期：1996-12-10 00:00:00

abstract：:To repurpose compounds for diffuse large B cell lymphoma (DLBCL), we screened a library of drugs and other targeted compounds approved by the US Food and Drug Administration on 9 cell lines and validated the results on a panel of 32 genetically characterized DLBCL cell lines. Dasatinib, a multikinase inhibitor, was ef...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Scuoppo C,Wang J,Persaud M,Mittan SK,Basso K,Pasqualucci L,Rabadan R,Inghirami G,Grandori C,Bosch F,Dalla-Favera R

更新日期：2019-08-20 00:00:00

abstract：:Leptin is a pivotal regulator of energy and glucose homeostasis, and defects in leptin signaling result in obesity and diabetes. The ATP-sensitive potassium (K(ATP)) channels couple glucose metabolism to insulin secretion in pancreatic β-cells. In this study, we provide evidence that leptin modulates pancreatic β-cell...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Park SH,Ryu SY,Yu WJ,Han YE,Ji YS,Oh K,Sohn JW,Lim A,Jeon JP,Lee H,Lee KH,Lee SH,Berggren PO,Jeon JH,Ho WK

更新日期：2013-07-30 00:00:00

abstract：:APOBEC3 (A3) genes are members of the AID/APOBEC gene family that are found exclusively in mammals. A3 genes encode antiviral proteins that restrict the replication of retroviruses by inducing G-to-A mutations in their genomes and have undergone extensive amplification and diversification during mammalian evolution. E...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ito J,Gifford RJ,Sato K

更新日期：2020-01-07 00:00:00

abstract：:An enzymatic activity, having the properties expected of a B-specific host-controlled modification enzyme, has been purified from an extract of Escherichia coli strain B. This activity renders the unmodified replicative form of phage fd resistant to B-specific restriction and is only present in strains carrying intact...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kühnlein U,Linn S,Arber W

更新日期：1969-06-01 00:00:00

abstract：:Climate change is expected to alter the distribution and abundance of many species. Predictions of climate-induced population extinctions are supported by geographic range shifts that correspond to climatic warming, but few extinctions have been linked mechanistically to climate change. Here we show that extinctions o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： McLaughlin JF,Hellmann JJ,Boggs CL,Ehrlich PR

更新日期：2002-04-30 00:00:00

abstract：:A central question in stem cell biology is whether organ homeostasis is maintained in adult organs through undifferentiated stem cells or self-duplication of specialized cell populations. To address this issue in the exocrine pancreas we analyzed the Bmi1-labeled cell lineage of pancreatic acinar cells. Previously, we...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sangiorgi E,Capecchi MR

更新日期：2009-04-28 00:00:00

abstract：:The virulent properties of the common human and livestock pathogen Clostridium perfringens are attributable to a formidable battery of toxins. Among these are a number of large and highly modular carbohydrate-active enzymes, including the mu-toxin and sialidases, whose catalytic properties are consistent with degradat...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Adams JJ,Gregg K,Bayer EA,Boraston AB,Smith SP

更新日期：2008-08-26 00:00:00

abstract：:Disulfide bonds have only rarely been found in intracellular proteins. That pattern is consistent with the chemically reducing environment inside the cells of well-studied organisms. However, recent experiments and new calculations based on genomic data of archaea provide striking contradictions to this pattern. Our r...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mallick P,Boutz DR,Eisenberg D,Yeates TO

更新日期：2002-07-23 00:00:00

abstract：:The Mediator complex forms the bridge between transcriptional activators and RNA polymerase II. Mediator subunit Med1/TRAP220 is a key component of Mediator originally found to associate with nuclear hormone receptors. Med1 deficiency causes lethality at embryonic day 11.5 because of defects in heart and placenta deve...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Stumpf M,Waskow C,Krötschel M,van Essen D,Rodriguez P,Zhang X,Guyot B,Roeder RG,Borggrefe T

更新日期：2006-12-05 00:00:00

abstract：:The specificity with which the genetic code is read in protein synthesis, and with which other highly specific biosynthetic reactions take place, can be increased above the level available from free energy differences in intermediates or kinetic barriers by a process defined here as kinetic proofreading. A simple kine...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hopfield JJ

更新日期：1974-10-01 00:00:00

abstract：:The light-harvesting phycobilisome in cyanobacteria and red algae requires the lyase-catalyzed chromophorylation of phycobiliproteins. There are three functionally distinct lyase families known. The heterodimeric E/F type is specific for attaching bilins covalently to α-subunits of phycocyanins and phycoerythrins. Unl...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zhao C,Höppner A,Xu QZ,Gärtner W,Scheer H,Zhou M,Zhao KH

更新日期：2017-12-12 00:00:00

abstract：:A Drosophila cDNA encoding a human transcription factor TFIIB homologue was isolated by PCR methods. The deduced amino acid sequence indicates 85% sequence similarity with human TFIIB, and the corresponding cDNA product expressed in Escherichia coli is interchangeable with human TFIIB for both basal and GAL4-VP16-indu...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yamashita S,Wada K,Horikoshi M,Gong DW,Kokubo T,Hisatake K,Yokotani N,Malik S,Roeder RG,Nakatani Y

更新日期：1992-04-01 00:00:00