Subcellular localization and self-interaction of plant-specific Nt-4/1 protein.

Abstract:

:The Nicotiana tabacum Nt-4/1 protein is a plant-specific protein of unknown function. Analysis of bacterially expressed Nt-4/1 protein in vitro revealed that the protein secondary structure is mostly alpha-helical and suggested that it could consist of three structural domains. Earlier studies of At-4/1, the Arabidopsis thaliana-encoded ortholog of Nt-4/1, demonstrated that GFP-fused At-4/1 was capable of polar localization in plant cells, association with plasmodesmata, and cell-to-cell transport. Together with the At-4/1 ability to interact with a plant virus movement protein, these data supported the hypothesis of the At-4/1 protein involvement in viral transport through plasmodesmata. Studies of the Nt-4/1-GFP fusion protein reported in this paper revealed that the protein was localized to cytoplasmic bodies, which were co-aligned with actin filaments and capable of actin-dependent intracellular movement. The Nt-4/1-GFP bodies, being non-membrane structures, were found in association with the plasma membrane, the tubular endoplasmic reticulum and endosome-like structures. Bimolecular fluorescence complementation experiments and inhibition of nuclear export showed that the Nt-4/1 protein was capable of nuclear-cytoplasmic transport. The nuclear export signal (NES) was identified in the Nt-4/1 protein by site-directed mutagenesis. The Nt-4/1 NES mutant was localized to the nucleoplasm forming spherical bodies. Immunogold labeling and electron microscopy of cytoplasmic Nt-4/1-containing bodies and nuclear structures containing the Nt-4/1 NES mutant revealed differences in their fine structure. In mammalian cells, Nt-4/1-GFP formed cytoplasmic spherical bodies similar to those found for the Nt-4/1 NES mutant in plant cell nuclei. Using dynamic laser light scattering and electron microscopy, the Nt-4/1 protein was found to form multimeric complexes in vitro.

journal_name

Biochimie

journal_title

Biochimie

authors

Solovyev AG,Minina EA,Makarova SS,Erokhina TN,Makarov VV,Kaplan IB,Kopertekh L,Schiemann J,Richert-Pöggeler KR,Morozov SY

doi

10.1016/j.biochi.2013.02.015

subject

Has Abstract

pub_date

2013-07-01 00:00:00

pages

1360-70

issue

7

eissn

0300-9084

issn

1638-6183

pii

S0300-9084(13)00072-2

journal_volume

95

pub_type

杂志文章
  • Effect of the terminal phosphate derivatization of beta- and alpha-oligodeoxynucleotides on their antisense activity in protein biosynthesis, stability and uptake by eucaryotic cells.

    abstract::Inhibition of polypeptide chain elongation with the mRNA-complementary (antisense) oligonucleotide has been realized through a RNase H independent mechanism. Nuclease resistant complementary non-natural alpha-17-mer oligonucleotide did not inhibit cell-free protein biosynthesis of beta-globin in the wheat germ system ...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(92)90089-w

    authors: Boutorine AS,Boiziau C,Le Doan T,Toulmé JJ,Hélène C

    更新日期:1992-05-01 00:00:00

  • Hypermethioninemia provokes oxidative damage and histological changes in liver of rats.

    abstract::In the present study we evaluated the effect of chronic methionine administration on oxidative stress and biochemical parameters in liver and serum of rats, respectively. We also performed histological analysis in liver. Results showed that hypermethioninemia increased chemiluminescence, carbonyl content and glutathio...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2009.04.018

    authors: Stefanello FM,Matté C,Pederzolli CD,Kolling J,Mescka CP,Lamers ML,de Assis AM,Perry ML,dos Santos MF,Dutra-Filho CS,Wyse AT

    更新日期:2009-08-01 00:00:00

  • Phospholipases A2 in ocular homeostasis and diseases.

    abstract::Phospholipases A(2) (PLA(2)s) and its generation of second messengers play an important role in signal transduction, cell proliferation, cell survival and gene expression. At low concentrations mediators of PLA(2) activity have a variety of physiological effects whereas high levels of PLA(2) and its metabolites are ge...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2010.04.007

    authors: Wang J,Kolko M

    更新日期:2010-06-01 00:00:00

  • Antagonistic RNA aptamer specific to a heterodimeric form of human interleukin-17A/F.

    abstract::Interleukin-17 (IL-17) is a pro-inflammatory cytokine produced primarily by a subset of CD4(+)T cells, called Th17 cells, that is involved in host defense, inflammation and autoimmune disorders. The two most structurally related IL-17 family members, IL-17A and IL-17F, form homodimeric (IL-17A/A, IL-17F/F) and heterod...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2011.04.003

    authors: Adachi H,Ishiguro A,Hamada M,Sakota E,Asai K,Nakamura Y

    更新日期:2011-07-01 00:00:00

  • Hydration of transfer RNA molecules: a crystallographic study.

    abstract::Four crystal structures of transfer RNA molecules were refined at 3 A resolution with the inclusion of the solvent molecules found in the difference maps: yeast tRNA-phe in the orthorhombic form, yeast tRNA-phe in the monoclinic form and yeast tRNA-asp in the A and B forms. Over 100 solvent molecules were located in e...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/0300-9084(88)90056-9

    authors: Westhof E,Dumas P,Moras D

    更新日期:1988-02-01 00:00:00

  • Origin of microbial life hypothesis: a gel cytoplasm lacking a bilayer membrane, with infrared radiation producing exclusion zone (EZ) water, hydrogen as an energy source and thermosynthesis for bioenergetics.

    abstract::The hypothesis is proposed that pre-biotic bacterial cell(s) and the first cells capable of growth/division did not require a cytoplasmic membrane. A gel-like microscopic structure less than a cubic micrometer may have had a dual role as both an ancient pre-cytoplasm and a boundary layer to the higher-entropy external...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2011.10.002

    authors: Trevors JT,Pollack GH

    更新日期:2012-01-01 00:00:00

  • A large-scale comparative analysis of affinity, thermodynamics and functional characteristics of interactions of twelve cytochrome P450 isoforms and their redox partners.

    abstract::The aim of the present work was to establish the thermodynamic and functional differences in the protein-protein interactions between the components of the P450-dependent mitochondrial (mit) and microsomal (mic) monooxygenase systems using 12 different isoforms of cytochromes P450 and two redox partners, NADPH-depende...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2019.04.020

    authors: Yablokov EO,Sushko TA,Ershov PV,Florinskaya AV,Gnedenko OV,Shkel TV,Grabovec IP,Strushkevich NV,Kaluzhskiy LA,Usanov SA,Gilep AA,Ivanov AS

    更新日期:2019-07-01 00:00:00

  • Molecular characterization of BjussuSP-I, a new thrombin-like enzyme with procoagulant and kallikrein-like activity isolated from Bothrops jararacussu snake venom.

    abstract::A thrombin-like enzyme, named BjussuSP-I, isolated from Bothrops jararacussu snake venom, is an acidic single-chain glycoprotein with M(r)=61,000, pI approximately 3.8 and 6% sugar. BjussuSP-I shows high proteolytic activity upon synthetic substrates, such as S-2238 and S-2288. It also shows procoagulant and kallikrei...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2007.10.005

    authors: Sant'Ana CD,Bernardes CP,Izidoro LF,Mazzi MV,Soares SG,Fuly AL,Zingali RB,Magro AJ,Braz AS,Fontes MR,Stábeli RG,Sampaio SV,Soares AM

    更新日期:2008-03-01 00:00:00

  • Molecular cloning and characterization of four scorpion K(+)-toxin-like peptides: a new subfamily of venom peptides (alpha-KTx14) and genomic analysis of a member.

    abstract::Four full-length cDNAs encoding the precursors of four K(+)-toxin-like peptides (named BmKK(1), BmKK(2), BmKK(3) and BmmKK(4), respectively) were first isolated from a venom gland cDNA library of the Chinese scorpion Buthus martensii Karsch. The deduced precursors of BmKK(1), BmKK(2) and BmKK(3) are all made of 54 ami...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(01)01326-8

    authors: Zeng XC,Peng F,Luo F,Zhu SY,Liu H,Li WX

    更新日期:2001-09-01 00:00:00

  • Complete purification and studies on the structural and kinetic properties of two forms of yeast valyl-tRNA synthetase.

    abstract::Two forms of baker's yease valyl-tRNA synthetase have been purified to apparent homogeneity by classical methods. It was demonstrated that one of the two forms of the enzyme originates from the other by proteolysis, the respective amounts of each form depending on the physiological state of the yeast. The species main...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(76)80579-2

    authors: Kern D,Giegé R,Robre-Saul S,Boulanger Y,Ebel JP

    更新日期:1975-01-01 00:00:00

  • Neuronal sphingolipidoses: Membrane lipids and sphingolipid activator proteins regulate lysosomal sphingolipid catabolism.

    abstract::Glycosphingolipids and sphingolipids of cellular plasma membranes (PMs) reach luminal intra-lysosomal vesicles (LVs) for degradation mainly by pathways of endocytosis. After a sorting and maturation process (e.g. degradation of sphingomyelin (SM) and secretion of cholesterol), sphingolipids of the LVs are digested by ...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2016.05.004

    authors: Sandhoff K

    更新日期:2016-11-01 00:00:00

  • Trophoblastic p53 is stabilised by a cis-trans isomerisation necessary for the formation of high molecular weight complexes involving the N-terminus of p53.

    abstract::P53 is a transcription factor also called the "cellular gatekeeper of genome" because it can induce cell cycle arrest in G1, apoptosis or affect DNA replication in response to DNA damage. Wild type p53 is localised in both the cytoplasm and nucleus of first trimester trophoblastic cells (CTB). Immunoblotting of CTB wi...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2008.02.006

    authors: Cohen M,Wuillemin C,Bischof P

    更新日期:2008-06-01 00:00:00

  • Maize Ac/Ds transposon system leads to highly efficient germline transmission of transgenes in medaka (Oryzias latipes).

    abstract::As the medaka is a popular fish model in genetics, developmental biology and toxicology, the development of an efficient transgenic medaka technique is important for a variety of biological experiments. Here we demonstrated that the maize transposon system, Ac/Ds, greatly improved the transgenesis of microinjected DNA...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2011.07.006

    authors: Boon Ng GH,Gong Z

    更新日期:2011-10-01 00:00:00

  • Guide RNA modification as a way to improve CRISPR/Cas9-based genome-editing systems.

    abstract::Genome-editing technologies, in particular, CRISPR systems, are widely used for targeted regulation of gene expression and obtaining modified human and animal cell lines, plants, fungi, and animals with preassigned features. Despite being well described and easy to perform, the most common methods for construction and...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2019.09.003

    authors: Filippova J,Matveeva A,Zhuravlev E,Stepanov G

    更新日期:2019-12-01 00:00:00

  • A new fluorometric assay for the study of DNA-binding and 3'-processing activities of retroviral integrases and its use for screening of HIV-1 integrase inhibitors.

    abstract::Fluorometry using a substrate DNA labeled with a single fluorophore (6-carboxyfluorescein) at the 3'-end of the processed strand was shown to be a useful tool for monitoring DNA-binding and 3'-processing activities of HIV-1 and PFV integrases (INs). The DNA binding to either of the INs resulted in a fluorescence signa...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2012.06.009

    authors: Anisenko A,Agapkina J,Zatsepin T,Yanvarev D,Gottikh M

    更新日期:2012-11-01 00:00:00

  • A new bacterial dehydrogenase oxidizing the lignin model compound guaiacylglycerol beta-O-4-guaiacyl ether.

    abstract::A lignin model compound, named in short guaiagylglycerol beta-guaiacyl ether (GGE), contains the beta-0-4 ether linkage that is common in the chemical structure of lignin. A Pseudomonas sp. (GU5) had been isolated as an organism able to grow with GGE as the sole source of carbon and energy. When grown on vanillate, th...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(85)80292-3

    authors: Pelmont J,Barrelle M,Hauteville M,Gamba D,Romdhane M,Dardas A,Beguin C

    更新日期:1985-09-01 00:00:00

  • Sensitive to apoptosis gene protein regulates ionizing radiation-induced apoptosis.

    abstract::Organisms exposed to ionizing radiation (IR) undergo increases in the production of reactive oxygen species (ROS), which are determinant components in the induction of apoptosis. Sensitive to apoptosis gene (SAG) encodes a redox-inducible and apoptosis-protective antioxidant protein. This report demonstrates that the ...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2010.09.020

    authors: Kim SY,Yang ES,Lee YS,Lee J,Park JW

    更新日期:2011-02-01 00:00:00

  • Control of gene expression by base deamination: the case of RNA editing in wheat mitochondria.

    abstract::The term 'RNA editing' was used for the first time in 1986 to describe the process of uridylate insertion into trypanosomal mitochondrial transcripts. Since then, the term has been used more generally to describe a large variety of processes involving base insertions, deletions and conversions that generate RNAs with ...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/0300-9084(96)84757-2

    authors: Blanc V,Jordana X,Litvak S,Araya A

    更新日期:1996-01-01 00:00:00

  • Perspectives with cryogenic RF probes in biomedical MRI.

    abstract::Since discovery of high-temperature superconductive (HTS) ceramics by Bednorz and Muller in 1986, there has been an accelerated development of cold technologies in industry, including the domain of NMR detection. The purpose of this paper is to fix ideas about the stage that cryogenic radio frequency (RF) probe techni...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2003.09.016

    authors: Darrasse L,Ginefri JC

    更新日期:2003-09-01 00:00:00

  • The pyridoxal-phosphate-dependent enzymes exclusively catalyzing reactions of beta-replacement.

    abstract::Theoretic and experimental arguments are surveyed which justify the setting up, within the family of pyridoxal-P-dependent lyases, of a special subgroup that comprizes several enzymes catalyzing exclusively beta-replacement reactions of alpha-aminoacids with electronegative substituents in the beta-position. The autho...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/s0300-9084(76)80351-3

    authors: Braunstein AE,Goryachenkova EV

    更新日期:1976-01-01 00:00:00

  • Isolation and structure of a pseudopeptide gamma-L-glutamyl-L-aspartic acid from Datura stramonium that impairs learning retention in mice.

    abstract::Datura stramonium contains a compound that impairs learning retention in mice. It has been purified to homogeneity and its structure has been established as that of a gamma-L-glutamyl-L-aspartate. The biological activity of this pseudodipeptide has been found to be identical with that of the corresponding synthetic on...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(88)90183-6

    authors: Schmitz-Bourgeois M,Amiri I,Reinbolt J,Boulanger Y,Ungerer A

    更新日期:1988-09-01 00:00:00

  • PssO, a unique extracellular protein important for exopolysaccharide synthesis in Rhizobium leguminosarum bv. trifolii.

    abstract::Synthesis and secretion of polysaccharides by Gram-negative bacteria are a result of a concerted action of enzymatic and channel-forming proteins localized in different compartments of the cell. The presented work comprises functional characterization of PssO protein encoded within the previously identified, chromosom...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2008.08.004

    authors: Marczak M,Mazur A,Gruszecki WI,Skorupska A

    更新日期:2008-11-01 00:00:00

  • The stress protein TP53INP1 plays a tumor suppressive role by regulating metabolic homeostasis.

    abstract::In the recent years, we have provided evidence that Tumor Protein 53-Induced Nuclear Protein 1 (TP53INP1) is a key stress protein with antioxidant-associated tumor suppressive function. The TP53INP1 gene, which is highly conserved in mammals, is over-expressed during stress responses including inflammation. This gene ...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2015.07.024

    authors: Saadi H,Seillier M,Carrier A

    更新日期:2015-11-01 00:00:00

  • Nucleotide sugar transporters: biological and functional aspects.

    abstract::The Golgi apparatus serves as the major site of glycosylation reactions. Nucleotide sugars which are substrates of the Golgi localized glycosyltransferases are synthesized in the cytoplasm (cell nucleus in case of CMP-sialic acid) and must be transported into the compartment lumen. This transport function is carried o...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/s0300-9084(01)01322-0

    authors: Gerardy-Schahn R,Oelmann S,Bakker H

    更新日期:2001-08-01 00:00:00

  • Isolation, amino acid analysis and N-terminal sequence determination of the two subunits of the nickel-containing hydrogenase of Desulfovibrio gigas.

    abstract::The two subunits of the nickel-iron hydrogenase from Desulfovibrio gigas have been purified by preparative sodium dodecyl sulfate polyacrylamide gel electrophoresis and their amino acid compositions have been determined. The N-terminal sequences for 15 residues of the large subunit (Mr 62,000) and 25 residues of the s...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(88)90070-3

    authors: Nivière V,Forget N,Bovier-Lapierre G,Bonicel J,Hatchikian C

    更新日期:1988-02-01 00:00:00

  • Human mismatch repair, drug-induced DNA damage, and secondary cancer.

    abstract::DNA mismatch repair (MMR) is an important replication error avoidance mechanism that prevents mutation. The association of defective MMR with familial and sporadic gastrointestinal and endometrial cancer has been acknowledged for some years. More recently, it has become apparent that MMR defects are common in acute my...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2003.10.007

    authors: Karran P,Offman J,Bignami M

    更新日期:2003-11-01 00:00:00

  • Role of nuclear architecture in the initiation of eukaryotic DNA replication.

    abstract::The eukaryotic genome is compacted in the cell nucleus, in a way that allows its faithful and ordered replication each cell cycle. Chromatin is organized into topologically constrained loops that are anchored to the nuclear matrix by specific attachment regions (SARs). Chromatin loops were proposed to correspond to re...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/s0300-9084(97)82001-9

    authors: Hyrien O,Maric C,Lucas I

    更新日期:1997-10-01 00:00:00

  • Activation of a cryptic splice site in the tax gene of HTLV-I by a single nucleotide change.

    abstract::We identified a T-to-C mutation 2 nucleotides (nt) upstream from the AG in a GT-AG intron between exons 2 and 3 in the human T-cell leukemia virus type I (HTLV-I) tax mRNA. This mutation resulted in the preferential usage of an alternative splice site, causing a 75-nt elongation of tax mRNA and reduced production of v...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2005.07.013

    authors: Ohsugi T

    更新日期:2006-02-01 00:00:00

  • Inhibition of the vacuolar ATPase of Acer pseudoplatanus cells by vanadate.

    abstract::Unlike most tonoplast ATPases, the vacuolar ATPase of Acer pseudoplatanus cells (Km = 0.4 mM) was strongly inhibited by vanadate (I50 = 10 microM). The inhibition was non-competitive. Chemicals usually added in the reaction mixture either increase (NH+4, K+) or decrease (Na+, EDTA) the ATPase inhibition. However, thes...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(89)90044-8

    authors: Montrichard F,Pugin A,Gaudemer Y

    更新日期:1989-07-01 00:00:00

  • Inhibitor of differentiation 4 (ID4) acts as an inhibitor of ID-1, -2 and -3 and promotes basic helix loop helix (bHLH) E47 DNA binding and transcriptional activity.

    abstract::The four known ID proteins (ID1-4, Inhibitor of Differentiation) share a homologous helix loop helix (HLH) domain and act as dominant negative regulators of basic-HLH transcription factors. ID proteins also interact with many non-bHLH proteins in complex networks. The expression of ID proteins is increasingly observed...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2015.03.006

    authors: Sharma P,Chinaranagari S,Chaudhary J

    更新日期:2015-05-01 00:00:00