Copy number variations of chromosome 17p13.1 might be linked to high risk of lung cancer in heavy smokers.

Abstract:

:Lung cancer is the most common cause of cancer death worldwide. Smoking is known as the strongest single factor in the development of lung cancer. However, there are inherited genetic factors that cause different responses to cigarette smoking exposure among individuals. We tried to identify these differences in heavy smokers by examining copy number variations (CNVs) between lung cancer patients and healthy controls. Analysis by array comparative genomic hybridization which was tested with 20-person training set (10 lung cancer patients, 10 healthy controls) showed 26 significant (adjusted P < 0.05) clones with either copy number gains or losses. Three genes, KCTD11, FGF11, and PTPRH on chromosomal regions 17p13.1 (KCTD11 and FGF11) and 19q13.42 (PTPRH), were selected (adjusted P < 0.001) and tested by real-time quantitative PCR with 34 healthy controls and 54 lung cancer patients. KCTD11 on the chromosomal region 17p13.1 showed significant high odds ratio (OR = 16.0) in heavy smokers, implying that this is a susceptibility region for lung cancer in this group. Therefore, CNVs of 17p13.1 is a promising candidate to identify individuals with a high genetic risk for the development of lung cancer.

journal_name

Mol Biol Rep

authors

Lee M,Lee Y,Cho HJ,Hong J,Kwon SJ,Park CG,Lee HY,Son JW,Kang J

doi

10.1007/s11033-010-0672-3

subject

Has Abstract

pub_date

2011-11-01 00:00:00

pages

5211-7

issue

8

eissn

0301-4851

issn

1573-4978

journal_volume

38

pub_type

杂志文章
  • Annexin 1 protects against apoptosis induced by serum deprivation in transformed rat retinal ganglion cells.

    abstract::To investigate whether Annexin 1 can protect a retinal ganglion cells line (RGC-5) from apoptosis as induced by serum deprivation. Annexin 1 location in RGC-5 cells was determined using an indirect immunofluorescent assay. Expression of Annexin 1 in RGC-5 cultures deprived of serum for 0, 2 days was semi-quantified by...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-1358-1

    authors: Sun J,Shao Z,Yang Y,Wu D,Zhou X,Yuan H

    更新日期:2012-05-01 00:00:00

  • The effect of NF-κB antisense oligonucleotide on transdifferentiation of fibroblast in lung tissue of mice injured by bleomycin.

    abstract::To investigate the influence of NF-κB antisense oligonucleotide on transdifferentiation of fibroblast in the pathological process of bleomycin-induced pulmonary fibrosis in mice. 6 h before molding of C57BL/6 model of pulmonary fibrosis in mice, NF-κB antisense oligonucleotide was injected from caudal vein. Then the l...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3273-8

    authors: Zhou Y,Zhang X,Tan M,Zheng R,Zhao L

    更新日期:2014-06-01 00:00:00

  • ASYMMETRIC LEAVES2 gene, a member of LOB/AS2 family of Arabidopsis thaliana, causes an abaxializing leaves in transgenic cockscomb.

    abstract::The leaf primordium derives from the peripheral zone of shoot apical meristem. During the formation of leaf primordia, they need to establish the proximodistal, mediolateral, and ab/adaxial axes. Among these axes, the ab/adaxial axis might be the most important. ASYMMETRIC LEAVES2 (AS2) gene is a member of AS2/LATERAL...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-1288-y

    authors: Sun SB,Song JP,Meng LS

    更新日期:2012-04-01 00:00:00

  • S-adenosylmethionine stimulates fatty acid metabolism-linked gene expression in porcine muscle satellite cells.

    abstract::Evidence indicates that both S-adenosylmethionine (SAMe) metabolism and intramuscular fat are associated with insulin resistance and type II diabetes. However, it is still unknown whether SAMe have effects on intramuscular adipogenesis. The present study investigated the roles of SAMe in the adipogenic differentiation...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9893-8

    authors: Yue T,Fang Q,Yin J,Li D,Li W

    更新日期:2010-10-01 00:00:00

  • Inhibitory mechanism of Penicillin V on mushroom tyrosinase.

    abstract::Penicillin V is a bacteriolytic β-lactam antibiotic drug. In the present work, we investigated the inhibitory effect of Penicillin V on the activity of mushroom tyrosinase for the first time. The molecular mechanism for the inhibition of tyrosinase by Penicillin V was investigated by means of kinetics analysis, fluore...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05188-6

    authors: Dong X,Wang S,Xu L,Lin J,Xu X

    更新日期:2020-02-01 00:00:00

  • Genetic polymorphisms of glutathione S-transferase M1 and bladder cancer risk: a meta-analysis of 26 studies.

    abstract::Studies investigating the association between glutathione S-transferase M1 (GSTM1) polymorphism and bladder cancer risk report conflicting results. The objective of this study was to quantitatively summarize the evidence for such a relationship. We performed a systematic search of the National Library of Medline and E...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-010-0386-6

    authors: Zhang R,Xu G,Chen W,Zhang W

    更新日期:2011-04-01 00:00:00

  • EGY2, a chloroplast membrane metalloprotease, plays a role in hypocotyl elongation in Arabidopsis.

    abstract::Intramembrane proteases control many important processes in a wide variety of organisms through regulated intramembrane proteolysis (RIP). However, very few intramembrane proteases have been characterized in plants. Intriguingly, EGY2 in Arabidopsis belongs to the Site-2 protease (S2P) family that performs RIP. It con...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-0962-4

    authors: Chen G,Law K,Ho P,Zhang X,Li N

    更新日期:2012-03-01 00:00:00

  • Expression and roles of As-NUPR1 protein from Artemia sinica during embryo development and in response to salinity stress.

    abstract::As-NUPR1, a stress-related protein, plays an important role in post-diapause during embryonic development in the brine shrimp Artemia sinica. In the present study, successful expression of As-NUPR1 from the cDNA sequence isolated from A. sinica was demonstrated using a prokaryotic expression system. The recombinant pr...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3208-4

    authors: Zhang R,Yao F,Cheng C,Chen Y,Lv Y,Li Z,Zhao N,Wang T,Xin W,Zou X,Hou L

    更新日期:2014-05-01 00:00:00

  • New mutation in the MYOC gene and its association with primary open-angle glaucoma in a Chinese family.

    abstract::Myocilin (MYOC) gene is expressed in many ocular tissues, including the trabecular meshwork, a specialized eye tissue essential in regulating intraocular pressure. Many mutations in MYOC have been detected in primary open-angle glaucoma (POAG). We investigated whether MYOC mutations contributed to the susceptibility t...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9667-3

    authors: Qu X,Zhou X,Zhou K,Xie X,Tian Y

    更新日期:2010-01-01 00:00:00

  • New uracil analogs as downregulators of ABC transporters in 5-fluorouracil-resistant human leukemia HL-60 cell line.

    abstract::Overexpression of ATP-binding cassette (ABC) transporters causing multidrug resistance (MDR) in cancer cells is one of the major obstacles in cancer chemotherapy. The 5-FU resistant subclone (HL-60/5FU) of the human HL-60 promyelocytic leukemia cell line was selected by the conventional method of continuous exposure o...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05017-w

    authors: Długosz-Pokorska A,Pięta M,Janecki T,Janecka A

    更新日期:2019-12-01 00:00:00

  • Toremifene and tamoxifen have similar efficacy in the treatment of patients with breast cancer: a meta-analysis of randomized trials.

    abstract::A meta-analysis of randomized trials was performed to compare the efficacy of toremifene (TOR) with tamoxifen (TAM) in patients with breast cancer. A total of 4,768 intention-to-treat patients from nine randomized trials were identified, with 2,587 patients in TOR group and 2,181 patients in TAM group. The primary out...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-013-2914-7

    authors: Ye QL,Zhai ZM

    更新日期:2014-02-01 00:00:00

  • Effects of diets high in corn oil or in extra virgin olive oil on oxidative stress in an experimental model of breast cancer.

    abstract::Experimental evidence highlights the importance of dietetic factors on breast cancer. In this work we aimed to analyze the effects two oils, corn oil (rich in n-6 polyunsaturated fatty acids -PUFA-) and extra virgin olive oil (EVOO), on oxidative stress in an animal model of breast carcinogenesis. Female rats were fed...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05492-6

    authors: Escrich R,Vela E,Solanas M,Moral R

    更新日期:2020-07-01 00:00:00

  • Relative gene expression of bile salt hydrolase and surface proteins in two putative indigenous Lactobacillus plantarum strains under in vitro gut conditions.

    abstract::Probiotic bacteria must overcome the toxicity of bile salts secreted in the gut and adhere to the epithelial cells to enable their better colonization with extended transit time. Expression of bile salt hydrolase and other proteins on the surface of probiotic bacteria can help in better survivability and optimal funct...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-1006-9

    authors: Duary RK,Batish VK,Grover S

    更新日期:2012-03-01 00:00:00

  • 1-Deoxynojirimycin modulates glucose homeostasis by regulating the combination of IR-GlUT4 and ADIPO-GLUT4 pathways in 3T3-L1 adipocytes.

    abstract::1-Deoxynojirimycin (DNJ), the main alkaloid in mulberry leaves, was recognized to treat patients with type 2 diabetes mellitus (T2DM). However, the regulatory mechanism of DNJ on glucose homeostasis was still unclear. In the present study, a safe concentration of 0.1-10 μmol/L for DNJ was incubated with mature 3T3-L1 ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05069-y

    authors: Li Q,Wang Y,Dai Y,Shen W,Liao S,Zou Y

    更新日期:2019-12-01 00:00:00

  • Effects of copper toxicity at different pH and temperatures on the in vitro enzyme activity in blood and liver of fish, Prochilodus lineatus.

    abstract::Blood and liver from curimbata (Prochilodus lineatus) acclimated at pH 4.5, 7.0 and 8.0 and at 20 and 30 °C were exposed in vitro to different concentrations of copper (Cu): 98 ± 0.8 μg Cu L-1 at pH 4.5 and 16 ± 0.2 μg Cu L-1 at pH 8.0 at 20 °C; 88 ± 0.8 μg Cu L-1 at pH 4.5 and 14 ± 0.5 μg Cu L-1 at pH 8.0 at 30 °C an...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-04944-y

    authors: Dos Santos Carvalho C,Fernandes MN

    更新日期:2019-10-01 00:00:00

  • Modulation of lactate dehydrogenase isozymes by modified base queuine.

    abstract::The modified base queuine is a nutrient factor for lower and higher eukaryotes except yeast. It is synthesized in eubacteria and inserted into the wobble position of specific tRNAs (tRNA(GUN)) in exchange of guanine at position 34. The tRNAs of Q family are completely modified in terminally differentiated somatic cell...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-004-6941-2

    authors: Pathak C,Vinayak M

    更新日期:2005-09-01 00:00:00

  • A clue to the origin of life: begin from making tools.

    abstract::The small molecules already existing on the earth can be assembled to biological macromolecules in the presence of the suitable tool. A workman must sharpen his tools if he is to do his work well. The tool must be specific, delicate and automatic. Obviously, it is enzyme. Therefore, to explore the origin of life we mu...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-007-9189-9

    authors: Yin X,Yuan Z

    更新日期:2009-02-01 00:00:00

  • Cortactin and Exo70 mediated invasion of hepatoma carcinoma cells by MMP-9 secretion.

    abstract::This study was aimed to evaluate the regulation mechanism of cortactin (CTTN) on matrix metalloproteinases 9 (MMP-9) and its relations with Exo70 in invasion of hepatoma carcinoma (HCC) cells. The expression levels of CTTN, Exo70 and MMP-9 were detected in normal hepatocytes and various HCC cells by real-time PCR. The...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-016-3972-4

    authors: Zhao G,Zhang H,Huang Z,Lv L,Yan F

    更新日期:2016-05-01 00:00:00

  • Resistin polymorphisms show associations with obesity, but not with bone parameters in men: results from the Odense Androgen Study.

    abstract::Resistin is an obesity-related adipokine which has also been implicated in bone metabolism. Therefore, we designed a study to investigate the possible role of resistin gene variation in both obesity and bone mineral density. We included 1,155 individuals from the Odense Androgen Study (663 young subjects and 492 older...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-2327-z

    authors: Beckers S,Zegers D,Van Camp JK,Boudin E,Nielsen TL,Brixen K,Andersen M,Van Hul W

    更新日期:2013-03-01 00:00:00

  • BACs-on-Beads™ assay, a rapid aneuploidy test, improves the diagnostic yield of conventional karyotyping.

    abstract::BACs-on-Beads (BoBs™) assay is a rapid aneuploidy test (RAT) that detects numerical chromosomal aneuploidies and multiple microdeletion/microduplication syndromes. This study was conducted to appraise the usefulness of the BoB™ assay as a complementary diagnostic tool to conventional karyotyping for the rapid detectio...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05117-7

    authors: Farra C,Nassar AH,Mirza F,Abdouni L,Souaid M,Awwad J

    更新日期:2020-01-01 00:00:00

  • Gene transfer to plants by electroporation: methods and applications.

    abstract::Developing gene transfer technologies enables the genetic manipulation of the living organisms more efficiently. The methods used for gene transfer fall into two main categories; natural and artificial transformation. The natural methods include the conjugation, transposition, bacterial transformation as well as phage...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-020-05343-4

    authors: Ozyigit II

    更新日期:2020-04-01 00:00:00

  • Combined analysis of the association between p73 G4C14-to-A4T14 polymorphisms and cancer risk.

    abstract::P73 is a structural and functional homologue of p53, and plays an important role in regulating cell cycle and apoptosis. A potentially functional polymorphism (designated as p73 G4C14-to-A4T14) has been identified in a region in exon 2 of the p73 gene, which may theoretically form a stem-loop structure and thereby aff...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-011-0913-0

    authors: Wang L,Gao R,Yu L

    更新日期:2012-02-01 00:00:00

  • Differentially expressed three non-coding alternate exons at 5' UTR of regulatory type I beta subunit gene of mouse.

    abstract::Prkar1b gene encodes regulatory type I, beta subunit (RIβ) of cAMP dependent protein kinase A in mouse. Among the various isoforms of regulatory and catalytic subunits that comprise mammalian PKA, RIβ subunit is considered to be one of the important subunits for neuronal functions. This is involved in multiple forms o...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-1108-4

    authors: Banday AR,Azim S,Tabish M

    更新日期:2012-04-01 00:00:00

  • Genomic organization and promoter analysis of a transcriptional repressor gene from Fenneropenaeus chinensis.

    abstract::In this study, we cloned and sequenced genomic sequences from a Fenneropenaeus chinensis transcriptional repressor gene, FcTR. The FcTR gene is 2,671 bp in length and has four exons and three introns. The 873 bp promoter contains several transcription factor binding sites, including a TATA box and a cyclic AMP-respons...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3780-7

    authors: Lai X,Shen S,Gao H,Yan B

    更新日期:2015-02-01 00:00:00

  • Differential expression of genes and proteins associated with wool follicle cycling.

    abstract::Sheep are valuable resources for the wool industry. Wool growth of Aohan fine wool sheep has cycled during different seasons in 1 year. Therefore, identifying genes that control wool growth cycling might lead to ways for improving the quality and yield of fine wool. In this study, we employed Agilent sheep gene expres...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3405-1

    authors: Liu N,Li H,Liu K,Yu J,Cheng M,De W,Liu J,Shi S,He Y,Zhao J

    更新日期:2014-08-01 00:00:00

  • Combination treatment with dendrosomal nanocurcumin and doxorubicin improves anticancer effects on breast cancer cells through modulating CXCR4/NF-κB/Smo regulatory network.

    abstract::Despite advantageous antitumor properties of doxorubicin, the considerable cytotoxicity of this chemotherapeutic agent has made it necessary to develop combination treatment strategies. The aim of the current study was to investigate the possible synergism between dendrosomal nanocurcumin (DNC) and doxorubicin in elic...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-017-4115-2

    authors: Mahjoub MA,Bakhshinejad B,Sadeghizadeh M,Babashah S

    更新日期:2017-08-01 00:00:00

  • Angiogenic and anti-angiogenic factor gene transcript level quantitation by quantitative real time PCR in patients with hepatocellular carcinoma.

    abstract::Tumor angiogenesis, a major requirement for tumor growth and metastasis, is regulated by pro- and anti-angiogenic factors. The aim of this study was to quantify the expression of angiogenic (VEGF, HIF-1α, Angiopiotein-2) and anti-angiogenic (endostatin, angiostatin and Thrombospondin-1) factors and to discern their cl...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2690-4

    authors: Sharma BK,Srinivasan R,Kapil S,Singla B,Chawla YK,Chakraborti A,Saini N,Duseja A,Das A,Kalra N,Dhiman RK

    更新日期:2013-10-01 00:00:00

  • Deregulated expression of circadian clock and clock-controlled cell cycle genes in chronic lymphocytic leukemia.

    abstract::Circadian rhythms are endogenous and self-sustained oscillations of multiple biological processes with approximately 24-h rhythmicity. Circadian genes and their protein products constitute the molecular components of the circadian oscillator that form positive/negative feedback loops and generate circadian rhythms. Th...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2841-7

    authors: Rana S,Munawar M,Shahid A,Malik M,Ullah H,Fatima W,Mohsin S,Mahmood S

    更新日期:2014-01-01 00:00:00

  • Molecular cloning, polymorphism and association analyses of a novel porcine mRNA differentially expressed in the Longissimus muscle tissues from Meishan and Large White pigs.

    abstract::The mRNA differential display technique was performed to investigate the differences of gene expression in the longissimus muscle tissues from Meishan and Large White pigs. One novel mRNA that was differentially expressed was identified through semi-quantitative RT-PCR and the cDNA complete sequence was then obtained ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-008-9326-0

    authors: Liu GY,Xiong YZ

    更新日期:2009-07-01 00:00:00

  • Text mining and network analysis of molecular interaction in non-small cell lung cancer by using natural language processing.

    abstract::Lung cancer including non-small cell lung cancer (NSCLC) and small cell lung cancer is one of the most aggressive tumors with high incidence and low survival rate. The typical NSCLC patients account for 80-85 % of the total lung cancer patients. To systemically explore the molecular mechanisms of NSCLC, we performed a...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,收录出版

    doi:10.1007/s11033-014-3705-5

    authors: Li J,Bi L,Sun Y,Lu Z,Lin Y,Bai O,Shao H

    更新日期:2014-12-01 00:00:00