Description of a novel actinobacterium Microbacterium assamensis sp. nov., isolated from water sample collected from the river Brahmaputra, Assam, India.

Abstract:

:A Gram-positive, yellow pigmented actinobacterium, strain S2-48(T) was isolated from water sample collected from the river Brahmaputra, Assam, India and subjected to a polyphasic taxonomic study. Most of the physiological and biochemical properties, major fatty acids (C(15:0) Anteiso, iso C(16:0) and C(17:0) Anteiso), estimated DNA G+C content (70.2 mol%) and 16S rRNA gene sequence analysis showed that strain S2-48(T) belonged to the genus Microbacterium. Strain S2-48(T) exhibited highest 16S rRNA gene sequence similarity with Microbacterium testaceum (97.0%); however, the DNA-DNA relatedness value between strain S2-48(T) and M. testaceum was 9.1%. On the basis of differential phenotypic characteristics and genotypic distinctiveness, strain S2-48(T) should be classified within the genus Microbacterium as a novel species, for which the name Microbacterium assamensis is proposed. The type strain is S2-48(T) (=MTCC 10486(T) = DSM 23998(T)).

journal_name

Curr Microbiol

journal_title

Current microbiology

authors

Kaur I,Dhanjal S,Korpole S,Bora TC,Mayilraj S

doi

10.1007/s00284-010-9822-z

subject

Has Abstract

pub_date

2011-03-01 00:00:00

pages

1039-43

issue

3

eissn

0343-8651

issn

1432-0991

journal_volume

62

pub_type

杂志文章
  • Light-dependent assimilation of trans-cinnamate by Rhodobacter sphaeroides OU5.

    abstract::We present a novel light-dependent metabolism of an aromatic compound (trans-cinnamate) that is assimilatory rather than dissimilatory. Light-dependent assimilation of trans-cinnamate was observed by both growing and resting cells of Rhodobacter sphaeroides OU5. Trans-cinnamate assimilation could be correlated with si...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-006-0440-8

    authors: Usha P,Sasikala Ch,Ramana ChV

    更新日期:2007-06-01 00:00:00

  • Effect of different temperature downshifts on protein synthesis by Aeromonas hydrophila.

    abstract::The psychrotrophic bacterium Aeromonas hydrophila 7966 was subjected to cold shocks from 30 degrees C to 20 degrees C, 15 degrees C, 10 degrees C, or 5 degrees C, or were incubated at low temperature to determine its adaptative response. The cell protein patterns analyzed by two-dimensional electrophoresis revealed th...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-004-4277-8

    authors: Imbert M,Gancel F

    更新日期:2004-08-01 00:00:00

  • Co-expression of the mosquitocidal toxins Cyt1Aa and Cry11Aa from Bacillus thuringiensis subsp. israelensis in Asticcacaulis excentricus.

    abstract::The cyt1Aa gene from Bacillus thuringiensis subsp. israelensis (Bti), whose product synergizes other mosquitocidal toxins, and functions as a repressor of resistance developed by mosquitoes against Bacilli insecticides, was introduced into the aquatic Gram-negative bacterium Asticcacaulis excentricus alongside the cry...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-006-0352-7

    authors: Zheng D,Valdez-Cruz NA,Armengol G,Sevrez C,Munoz-Olaya JM,Yuan Z,Orduz S,Crickmore N

    更新日期:2007-01-01 00:00:00

  • First Evidence of Intracellular Bacteria Cardinium in Thermophilic Mite Microzetorchestes emeryi (Acari: Oribatida): Molecular Screening of Bacterial Endosymbiont Species.

    abstract::We undertook the issue of the distribution of intracellular bacteria among Oribatida (Acari). Six genera of bacteria were detected by PCR and Sanger DNA sequencing: Wolbachia, Cardinium, Rickettsia, Spiroplasma, Arsenophonus, and Hamiltonella. Our research, for the first time, revealed the presence of Cardinium in Mic...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-019-01717-5

    authors: Konecka E,Olszanowski Z

    更新日期:2019-09-01 00:00:00

  • Expression of marker RNAs in Pseudomonas putida.

    abstract::A broad-host-range vector that expresses a unique artificial RNA in Pseudomonas putida has been developed. This vector was derived from the plasmid pBBR1MCS and incorporates regulatory regions from the Escherichia coli ribosomal operon, rrnB. These include the promoters P1 and P2, and the terminators T1 and T2. The ge...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s002849910017

    authors: D'Souza LM,Willson RC,Fox GE

    更新日期:2000-02-01 00:00:00

  • Effect of chlorhexidine on multi-species biofilms.

    abstract::With human saliva as an inoculum, microcosm dental plaques were grown on dental amalgam in a constant-depth film fermentor (CDFF) in the presence (suc +ve) and absence (suc -ve) of sucrose. The biofilms were then exposed to 0.2% chlorhexidine gluconate (CHG) for 1, 5, or 60 min and the survivors enumerated. Suc +ve bi...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s002849900272

    authors: Wilson M,Patel H,Noar JH

    更新日期:1998-01-01 00:00:00

  • Cloning, Expression, Purification, Regulation, and Subcellular Localization of a Mini-protein from Campylobacter jejuni.

    abstract::The Cj1169c-encoded putative protein of Campylobacter was expressed and purified from E. coli after sequence optimization. The purified protein allowed the production of a specific rabbit antiserum that was used to study the protein expression in vitro and its subcellular localization in the bacterial cell and putativ...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-015-0980-x

    authors: Aliouane S,Pagès JM,Bolla JM

    更新日期:2016-05-01 00:00:00

  • Cloning of two new cry genes from Bacillus thuringiensis subsp. wuhanensis strain.

    abstract::With PCR products as probes, we have cloned two new cry-type genes from Bacillus thuringiensis subsp. wuhanensis. The deduced amino acid sequence of the first clone is 77.3% identical to Cry1Ga1. The deduced protein sequence of the second clone is 69.8-78.7% identical to that of Cry1B group. The nomenclature assignmen...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s002849910046

    authors: Kuo WS,Lin JH,Tzeng CC,Kao SS,Chak KF

    更新日期:2000-04-01 00:00:00

  • Immunoproteomic Analysis of Antibody Response of Rabbit Host Against Heat-Killed Francisella tularensis Live Vaccine Strain.

    abstract::Francisella tularensis, the causative agent of tularemia, has attained the status of one of the high priority agents that could be used in the act of bioterrorism. Currently, there is no licensed vaccine for this highly infectious intracellular pathogen. Being a listed 'Category A' agent of the U.S. Center for Disease...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-017-1217-y

    authors: Gaur R,Alam SI,Kamboj DV

    更新日期:2017-04-01 00:00:00

  • Effects of Disodium Fumarate on In Vitro Rumen Fermentation, The Production of Lipopolysaccharide and Biogenic Amines, and The Rumen Bacterial Community.

    abstract::The effect of disodium fumarate (DF) on the ruminal fermentation profiles, the accumulation of lipopolysaccharide (LPS) and bioamines, and the composition of the ruminal bacterial community was investigated by in vitro rumen fermentation. The addition of DF increased the total gas production; the concentrations of pro...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-017-1322-y

    authors: Jin W,Xue C,Liu J,Yin Y,Zhu W,Mao S

    更新日期:2017-11-01 00:00:00

  • Whole-Genome Analysis of an Extensively Drug-Resistance Empedobacter falsenii Strain Reveals Distinct Features and the Presence of a Novel Metallo-ß-Lactamase (EBR-2).

    abstract::The spread of antibiotic resistance is rapidly threatening the effectiveness of antibiotics in the clinical setting. Many infections are being caused by known and unknown pathogenic bacteria that are resistant to many or all antibiotics currently available. Empedobacter falsenii is a nosocomial pathogen that can cause...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-018-1498-9

    authors: Collins C,Almuzara M,Saigo M,Montaña S,Chiem K,Traglia G,Mussi MA,Tolmasky M,Iriarte A,Vay C,Ramirez MS

    更新日期:2018-08-01 00:00:00

  • Expression of orf1 from the Bacillus thuringiensis NRD-12 cry2Aa1 operon.

    abstract::The 5' untranslated region and the orf1 sequence from the cry2Aa1 operon from Bacillus thuringiensis subsp. kurstaki NRD-12 were sequenced and compared to that from strain HD-1. The start codon described in HD-1 does not yield in NRD-12 a protein of the expected size of 20 kDa, but a 10-amino acid peptide. A second, h...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/pl00006828

    authors: Delattre D,Rang C,Lecointe N,Royer M,Delécluse A,Moar WJ,Frutos R

    更新日期:1999-07-01 00:00:00

  • Effects of ammonia and amino acids on the growth and proteolytic activity of three species of rumen bacteria: Prevotella albensis, Butyrivibrio fibrisolvens, and Streptococcus bovis.

    abstract::The addition of increasing physiological concentrations of ammonia or amino acids had distinct effects on the growth and proteolytic activity of Streptococcus bovis JB1, Prevotella albensis, and Butyrivibrio fibrisolvens DSM3071. The growth of S. bovis and B. fibrisolvens was enhanced by NH(3) and AA, and that of P. a...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s002840010074

    authors: Sales M,Lucas F,Blanchart G

    更新日期:2000-06-01 00:00:00

  • Endophytic bacteria from Ocimum sanctum and their yield enhancing capabilities.

    abstract::Endophytes are beneficial microbes that reside intercellularly inside the plants. Interaction of endophytes with the host plants and their function within their host are important to address ecological relevance of endophyte. Four endophytic bacteria OS-9, OS-10, OS-11, and OS-12 were isolated from healthy leaves of O...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-009-9520-x

    authors: Tiwari R,Kalra A,Darokar MP,Chandra M,Aggarwal N,Singh AK,Khanuja SP

    更新日期:2010-03-01 00:00:00

  • Molecular Phylogeny and Taxonomy of Yamadazyma dushanensis f.a., sp. nov., a Cellobiose-Fermenting Yeast Species from China.

    abstract::Three yeast strains of Yamadazyma dushanensis f.a., sp. nov. were isolated from rotten wood samples collected in the Dushan Forest Park, Nanyang, Henan Province, China. Sequence analyses of the D1/D2 domains of the large subunit rRNA gene and the internal transcribed spacer (ITS) regions revealed that this new species...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-015-0847-1

    authors: Wang Y,Ren YC,Li Y,Hui FL

    更新日期:2015-08-01 00:00:00

  • Use of a Cry1Ac-resistant line of Helicoverpa armigera (Lepidoptera: Noctuidae) to detect novel insecticidal toxin genes in Bacillus thuringiensis.

    abstract::This paper describes a screening strategy incorporating resistant insect lines for discovery of new Bacillus thuringiensis toxins against a background of known genes that would normally mask the activity of additional genes and the application of that strategy. A line of Helicoverpa armigera with resistance to Cry1Ac ...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-008-9098-8

    authors: Beard CE,Court L,Mourant RG,James B,Van Rie J,Masson L,Akhurst RJ

    更新日期:2008-09-01 00:00:00

  • Culturable heterotrophic bacteria associated with healthy and bleached scleractinian Madracis decactis and the fireworm Hermodice carunculata from the remote St. Peter and St. Paul Archipelago, Brazil.

    abstract::We report on the first characterization of the culturable heterotrophic bacteria of the scleractinian Madracis decactis. In addition, we characterized the culturable bacteria associated with the fireworm Hermodice carunculata, observed predating partially bleached coral colonies. Our study was carried out in the remot...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-013-0435-1

    authors: Moreira AP,Tonon LA,Pereira Cdo V,Alves N Jr,Amado-Filho GM,Francini-Filho RB,Paranhos R,Thompson FL

    更新日期:2014-01-01 00:00:00

  • Cloning and expression of an alpha-amylase gene from Phanerochaete chrysosporium.

    abstract::Based on the genomic sequence and cDNA library screening, the cDNA sequence encoding an alpha-amylase was cloned from the filamentous white-rot fungus Phanerochaete chrysosporium and designated as pcamy1. Alignment results showed that the predicted protein has up to 43% amino acid homology to the known alpha-amylases ...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-006-0600-x

    authors: Wu B,Hu GK,Feng H,Wu JM,Zhang YZ

    更新日期:2007-08-01 00:00:00

  • Antagonism Against Fish Pathogens by Cellular Components/Preparations of Bacillus coagulans (MTCC-9872) and It's In Vitro Probiotic Characterisation.

    abstract::Bacterial fish pathogens are pervasive in aquaculture. Control of bacterial fish pathogen is a difficult task among aquaculture practitioners. A large number of antibiotics are used for the control of prevalent bacterial pathogens in aquaculture. This may lead to drug resistance among pathogens and further treatment w...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-018-1506-0

    authors: Midhun SJ,Neethu S,Vysakh A,Radhakrishnan EK,Jyothis M

    更新日期:2018-09-01 00:00:00

  • Identification of a novel virulence-related gene in Streptococcus suis type 2 strains.

    abstract::The trag is a novel infection-related factor identified using in vivo-induced antigen technology (IVIAT) from SS2 expression libraries with swine convalescent sera. PCR-based studies of various S. suis strains collected from different sources revealed that the trag gene was present in all the virulent SS2 strains, but...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-010-9643-0

    authors: Zhang H,Fan H,Lu C

    更新日期:2010-12-01 00:00:00

  • Antimicrobial effect of red clover (Trifolium pratense) phenolic extract on the ruminal hyper ammonia-producing bacterium, Clostridium sticklandii.

    abstract::Ruminal proteolysis and subsequent amino acid degradation represent considerable economic loss in ruminant production. The hyper ammonia-producing bacteria (HAB) are largely responsible for amino acid deamination in the rumen. HAB can be controlled with ionophores, but they are also susceptible to antimicrobial plant ...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-010-9586-5

    authors: Flythe M,Kagan I

    更新日期:2010-08-01 00:00:00

  • Molecular cloning and characterization of nodD genes from Rhizobium sp. SIN-1, a nitrogen-fixing symbiont of Sesbania and other tropical legumes.

    abstract::Rhizobium sp. SIN-1, a nitrogen-fixing symbiont of Sesbania aculeata and other tropical legumes, carries two copies of nodD, both on a sym plasmid. We have isolated these two nodD genes by screening a genomic library of Rhizobium sp. SIN-1 with a nodD probe from Sinorhizobium meliloti. Nucleotide sequence and the dedu...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-002-3772-z

    authors: Rana D,Krishnan HB

    更新日期:2002-11-01 00:00:00

  • F-like plasmid sequences in enteric bacteria of diverse origin, with implication of horizontal transfer and plasmid host range.

    abstract::Seventy-eight bacterial isolates from human, animal, and plant hosts, representing eight species of the family Enterobacteriaceae, were screened for F-like plasmid sequences. Of the examined human Escherichia coli strains, 28% harbored one or two of the three F-like, RepFI replication regions, while 35% of the examine...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-001-0039-7

    authors: Mulec J,Starcic M,Zgur-Bertok D

    更新日期:2002-04-01 00:00:00

  • Identification of actinomycetes producing phospholipase d with high transphosphatidylation activity.

    abstract::Previously we isolated six actinomycetes strains, 9-4, 10-1, 10-2, 10-3, 10-6, and 21-4, that produce phospholipase D (PLD) with high transphosphatidylation activity. In this study, we identified these strains, and the PLD activities were compared with those of reference strains. 16S rDNA sequences and DNA-DNA hybridi...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-009-9551-3

    authors: Nakazawa Y,Suzuki R,Uchino M,Sagane Y,Kudo T,Nagai T,Sato H,Takano K

    更新日期:2010-05-01 00:00:00

  • Enhanced Hydrogen Production by Co-cultures of Hydrogenase and Nitrogenase in Escherichia coli.

    abstract::Rhodobacter sphaeroides is a bacterium that can produce hydrogen by interaction with hydrogenase and nitrogenase. We report a hydrogen production system using co-cultivation of hydrogenase in liquid medium and immobilized nitrogenase in Escherichia coli. The recombinant plasmid has been constructed to analyze the effe...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-015-0941-4

    authors: Lee HJ,Sekhon SS,Kim YS,Park JY,Kim YH,Min J

    更新日期:2016-03-01 00:00:00

  • GABA accumulation in response to different nitrogenous compounds in unicellular cyanobacterium Synechocystis sp. PCC 6803.

    abstract::GABA accumulation and glutamate decarboxylase (GAD) activity, the principal enzyme involved in GABA formation, was investigated in cyanobacterium Synechocystis sp. PCC 6803 wild-type (WT) and gad knockout mutant strains grown in medium containing different nitrogenous compounds. Nitrate was the best nitrogen source fo...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-014-0687-4

    authors: Kanwal S,Khetkorn W,Incharoensakdi A

    更新日期:2015-01-01 00:00:00

  • Bacterial species diversity in cigarettes linked to an investigation of severe pneumonitis in U.S. Military personnel deployed in operation iraqi freedom.

    abstract::This report presents results from a study on the bacterial diversity of cigarette brands collected from military personnel during the U.S. Army's investigation of a series of cases of acute eosinophilic pneumonitis in military personnel deployed in Operation Iraqi Freedom. Eight species of Bacillus, including five new...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-005-4491-z

    authors: Rooney AP,Swezey JL,Wicklow DT,McAtee MJ

    更新日期:2005-07-01 00:00:00

  • Physical mapping of the Bacillus thuringiensis subsp. kurstaki and alesti chromosomes.

    abstract::Two strains of the well-known insect pathogen and biopesticide, Bacillus thuringiensis (Bt), belonging to subspecies alesti (strain Bt5) and kurstaki (strain Bt213), were chosen for genetic characterization. The two strains belong to different serotypes and are currently classified into different subspecies, although ...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-001-0055-z

    authors: Lövgren A,Carlson CR,Kang D,Eskils K,Kolstø AB

    更新日期:2002-02-01 00:00:00

  • Effect of different carbon sources on decolourisation of an industrial textile dye under alkaline-saline conditions.

    abstract::White-rot fungal strains of Trametes versicolor and Phanerochaete chrysosporium were selected to study the decolourisation of the textile dye, Reactive Black 5, under alkaline-saline conditions. Free and immobilised T. versicolor cells showed 100 % decolourisation in the growth medium supplemented with 15 g l(-1) NaCl...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-013-0441-3

    authors: Ottoni C,Lima L,Santos C,Lima N

    更新日期:2014-01-01 00:00:00

  • Effects of Ultraviolet Radiation on the Gram-positive marine bacterium Microbacterium maritypicum.

    abstract::Although extensive information is available on the effect ultraviolet (UV) radiation has on Gram-negative marine bacteria, there is a scarcity of data concerning UV radiation and Gram-positive marine bacteria. The focus of this paper is on Microbacterium maritypicum, with the Gram-negative Vibrio natriegens being used...

    journal_title:Current microbiology

    pub_type: 杂志文章

    doi:10.1007/s00284-006-0349-2

    authors: Williams PD,Eichstadt SL,Kokjohn TA,Martin EL

    更新日期:2007-07-01 00:00:00