Association of genetic variants for FABP3 gene with back fat thickness and intramuscular fat content in pig.

Abstract:

:The swine fatty acid binding protein gene (FABP3) has been screened with 4 primer sets for 270 purebred Yorkshire pigs from National Institute of Animal Science. The selection of primers was based on the swine cDNA sequence (AJ416019), and primer sets (FABP3-2 and FABP3-3) amplified target segments in real time PCR to analyze expression levels at growth stages, producing 235 and 224 bp of fragments, respectively. Relative expression of the swine FABP3 gene for back and intramuscular fat was continuously increased from day 0 to 150, and decreased at day 210, showing the highest expression levels at day 150 compared with day 0. The results may be caused by requirements of high physiological activities with more gene expressions for growth around day 150. Nucleotide variations were observed at nucleotide positions 80 (A/G), 167 (A/G), 260 (A/G), 295 (A/G), 394 (T/C), and 440 (A/G), showing substitutions of amino acids at positions 80 (S to G), 167 (T to A), and 260 (S to G). FABP3 genotypes at positioned nt167 have been associated with carcass back fat thickness (BFT), and dominance genetic effects were observed for BFT with nt167 and intramuscular fat (IMF) contents with nt80. Our results concluded that the FABP3 polymorphisms can be used as genetic markers in breeding programs for IMF content as well as carcass BFT.

journal_name

Mol Biol Rep

authors

Cho KH,Kim MJ,Jeon GJ,Chung HY

doi

10.1007/s11033-010-0344-3

subject

Has Abstract

pub_date

2011-03-01 00:00:00

pages

2161-6

issue

3

eissn

0301-4851

issn

1573-4978

journal_volume

38

pub_type

杂志文章
  • MicroRNA signature associated with osteogenic lineage commitment.

    abstract::Cell-based approaches offer a potential therapeutic strategy for appropriate bone manufacturing. Capable of differentiating into multiple cell types especially osteoblasts spontaneously, unrestricted somatic stem cell (USSC) seems to be a suitable candidate. Recent studies have shown the involvement of microRNAs in se...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1591-2

    authors: Bakhshandeh B,Soleimani M,Hafizi M,Paylakhi SH,Ghaemi N

    更新日期:2012-07-01 00:00:00

  • Chemotherapeutic resistance in anaplastic astrocytoma cell lines treated with a temozolomide-lomeguatrib combination.

    abstract::The treatment of anaplastic astrocytoma (AA) is controversial. New chemotherapeutic approaches are needed for AA treatment. Temozolomide (TMZ) is one of the chemotherapeutic drugs for the treatment of AA. The cytotoxic effects of TMZ can be removed by the MGMT (O(6)-methylguanine-DNA methyltransferase) enzyme. Then, c...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2908-5

    authors: Ugur HC,Taspinar M,Ilgaz S,Sert F,Canpinar H,Rey JA,Castresana JS,Sunguroglu A

    更新日期:2014-02-01 00:00:00

  • Characterization of an acid inducible lipase Rv3203 from Mycobacterium tuberculosis H37Rv.

    abstract::The Rv3203 (LipV) of Mycobacterium tuberculosis (Mtb) H37Rv, is annotated as a member of Lip family based on the presence of characteristic consensus esterase motif ‘GXSXG’. In vitro culture studies of Mtb H37Ra indicated that expression of Rv3203 gene was up-regulated during acidic stress as compared to normal wherea...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2861-3

    authors: Singh G,Arya S,Narang D,Jadeja D,Singh G,Gupta UD,Singh K,Kaur J

    更新日期:2014-01-01 00:00:00

  • Potential protein partners for the N-terminal domain of human topoisomerase I revealed by phage display.

    abstract::Phage display procedure was applied to the N-terminal domain of human topoisomerase I. The consensus sequence identified for clones binding to the N-terminal domain was found in 35 human proteins that are either permanently or temporarily located in the nucleus. They are in majority involved in the DNA repair, transcr...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1023/a:1021237021338

    authors: Trzcińska AM,Girstun A,Piekiełko A,Kowalska-Loth B,Staroń K

    更新日期:2002-12-01 00:00:00

  • Effects of vascular endothelial growth factor B on proliferation and migration in EA.Hy926 cells.

    abstract::Vascular endothelial growth factor B (VEGF-B) was reported to be angiogenic, and it was considered as a neuroprotective agent in mouse retinal ganglion cells following optic nerve crush. Thus, it was necessary to investigate whether VEGF-B contributes to the process of retinal and choroidal neovascularization. We aime...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2917-4

    authors: Zhang GH,Qin R,Zhang SH,Zhu H

    更新日期:2014-02-01 00:00:00

  • Location of RNase and RNase inhibitor on free cytoplasmic mRNA-protein particles from human placenta.

    abstract::Free cytoplasmic mRNPs were isolated from human placenta. An activity of RNase was associated with these particles but was mostly inhibited by a labile protein inhibitor. Both RNase and RNase inhibitor were extractable from mRNPs by 0.5 M KCl. The nature of the association of the RNase-RNase inhibitor complex with mRN...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00775355

    authors: Gileadi O,Lorberboum H,de Groot N,Hochberg AA

    更新日期:1984-01-01 00:00:00

  • Common genetic variation in CYP1B1 is associated with concentrations of T₄, FT₃ and FT₄ in the sera of polycystic ovary syndrome patients.

    abstract::CYP1B1 encodes an estrogen enzyme that oxidizes 17β-estradiol to 4-hydroxyestradiol. The evidence demonstrates there may be a relationship between CYP1B1 and thyroid function. To date, no study has evaluated if genetic polymorphisms that regulate concentrations of serum FT3 and FT4 contribute to Polycyctic Ovary Syndr...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-2406-1

    authors: Zou S,Sang Q,Wang H,Feng R,Li Q,Zhao X,Xing Q,Jin L,He L,Wang L

    更新日期:2013-04-01 00:00:00

  • The impaired gene expression of adenosine monophosphate-activated kinase (AMPK), a key metabolic enzyme in leukocytes of newly diagnosed rheumatoid arthritis patients.

    abstract::The disturbed immune homeostasis is involved in the pathogenesis of an array of autoimmune diseases like rheumatoid arthritis (RA). The adenosine monophosphate-activated protein kinase (AMPK) with a pivotal role in immunometabolism process, also plays a regulatory function in the immune system. This study aims to eval...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05078-x

    authors: Samimi Z,Kardideh B,Zafari P,Bahrehmand F,Roghani SA,Taghadosi M

    更新日期:2019-12-01 00:00:00

  • Adipose derived stem cells and platelet rich plasma improve the tissue integration and angiogenesis of biodegradable scaffolds for soft tissue regeneration.

    abstract::Current surgical reconstruction for soft tissue replacement involves lipotransfer to restore soft tissue replacements but is limited by survival and longevity of the fat tissue. Alternative approaches to overcome these limitations include using biodegradable scaffolds with stem cells with growth factors to generate so...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05297-7

    authors: Naderi N,Griffin MF,Mosahebi A,Butler PE,Seifalian AM

    更新日期:2020-03-01 00:00:00

  • Molecular cloning and characterization of the UL31 gene from duck enteritis virus.

    abstract::Using a combination of bioinformation analysis and Dot blot technique, a gene, designated hereafter as the duck enteritis virus (DEV) UL31 gene (GenBank accession number EF643559), was identified from the DEV CHv genomic library. Then, the UL31 gene was cloned and sequenced, which was composed of 933 nucleotides encod...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9546-y

    authors: Xie W,Cheng A,Wang M,Chang H,Zhu D,Luo Q

    更新日期:2010-03-01 00:00:00

  • Genome-wide pathway analysis of genome-wide association studies on systemic lupus erythematosus and rheumatoid arthritis.

    abstract::The aim of this study was to explore candidate single nucleotide polymorphisms (SNPs) and candidate mechanisms of systemic lupus erythematosus (SLE) and rheumatoid arthritis (RA). Two SLE genome-wide association studies (GWASs) datasets were included in this study. Meta-analysis was conducted using 737,984 SNPs in 1,5...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-012-1952-x

    authors: Lee YH,Bae SC,Choi SJ,Ji JD,Song GG

    更新日期:2012-12-01 00:00:00

  • Glutathione S-transferase M1, T1, and P1 polymorphisms and risk of glioma: a meta-analysis.

    abstract::The relationship between genetic polymorphisms of glutathione S-transferase (GST) and the development of glioma has been investigated in several epidemiologic studies. However these studies report inconsistent results. In order to quantitatively summarise the evidence for such a relationship, a meta-analysis is conduc...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-012-2213-8

    authors: Fan Z,Wu Y,Shen J,Zhan R

    更新日期:2013-02-01 00:00:00

  • Rapid assessment of protein-tyrosine phosphatase expression levels by RT-PCR with degenerate primers.

    abstract::Using degenerate oligodeoxynucleotide primers we previously obtained cDNA fragments from ten different murine protein-tyrosine phosphatases (PTPases). Employing this same primer set, a method was developed to assess the expression levels of these PTPase family members in a fast and simple way. RT-PCR products of sever...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00997155

    authors: Hendriks W,Brugman C,Schepens J,Wieringa B

    更新日期:1994-03-01 00:00:00

  • The phosphorylation of protein S6 in the newly-synthesized cytoplasmic ribosomes of hamster fibroblasts.

    abstract::Ribosomes were isolated from baby hamster kidney fibroblasts, either 20 min or 2 days after labelling with radioactive amino acids, and their proteins subjected to two-dimensional polyacrylamide gel electrophoresis. No significant differences were observed between the amounts of radioactivity associated with the posit...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00777524

    authors: Kennedy IM,Leader DP

    更新日期:1980-12-31 00:00:00

  • Cloning and functional analysis of goat glucose transporter 4.

    abstract:OBJECTIVES:Glucose transporter (GLUT) 4 is a major mediator of blood glucose levels and a key regulator of whole-body glucose homeostasis. This study aimed at evaluating the function of goat GLUT4 on glucose absorption and the effect of GLUT4 on lactose synthesis in goat mammary gland epithelial (GMGE) cells. METHODS:...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2915-6

    authors: Zhu L,Yu Q,Lin J,Zhang Q,Yang Q

    更新日期:2014-02-01 00:00:00

  • Associations of FASN gene polymorphisms with economical traits in Nellore cattle (Bos primigenius indicus).

    abstract::The aim of this study was to identify molecular markers to be applied to marker-assisted selection. Three SNPs of the FASN gene were studied. PCR-RFLP was used for genotyping. The SNPs g.17924A>G, g.17860C>T and g.15603A>G all in the FASN gene were genotyped using the enzymes MscI, DdeI and Hae III, respectively. The ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1883-6

    authors: de Souza FR,Chiquitelli MG,da Fonseca LF,Cardoso DF,da Silva Fonseca PD,de Camargo GM,Gil FM,Boligon AA,Tonhati H,Mercadante ME,de Albuquerque LG

    更新日期:2012-12-01 00:00:00

  • CXCL12 and TP53 genetic polymorphisms as markers of susceptibility in a Brazilian children population with acute lymphoblastic leukemia (ALL).

    abstract::Acute lymphoblastic leukemia (ALL) is the most common pediatric malignancy. Genetic polymorphisms in the 3'UTR region of the CXCL12 (rs1801157) and TP53 codon 72 (rs1042522) genes may contribute to susceptibility to childhood ALL because they affect some important processes, such as metastasis regulation and tumor sup...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2551-1

    authors: de Lourdes Perim A,Guembarovski RL,Oda JM,Lopes LF,Ariza CB,Amarante MK,Fungaro MH,de Oliveira KB,Watanabe MA

    更新日期:2013-07-01 00:00:00

  • Stable overexpression of DNA fragmentation factor in T-47D cells: sensitization of breast cancer cells to apoptosis in response to acetazolamide and sulfabenzamide.

    abstract::Alterations in expression of the DFF40 gene have been reported in some cancers. This study is an in vitro study of the therapeutic effects of gene transfer that lead to elevation in DFF40 expression within T-47D cells in the presence of sulfonamide drugs. In this study, we have constructed a eukaryotic expression vect...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3626-3

    authors: Bagheri F,Safarian S,Eslaminejad MB,Sheibani N

    更新日期:2014-11-01 00:00:00

  • Overexpression of Ran gene from Lepidium latifolium L. (LlaRan) renders transgenic tobacco plants hypersensitive to cold stress.

    abstract::Ran is a multifunctional small GTPase involved in important cellular activities like nucleocytoplasmic transport, mitotic spindle assembly, nuclear envelope formation, etc., but is also known to be differentially expressed in response to abiotic stress, particularly low temperature. We have over-expressed Lepidium lat...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3476-z

    authors: Sinha VB,Grover A,Singh S,Pande V,Ahmed Z

    更新日期:2014-09-01 00:00:00

  • Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress.

    abstract::Relying on the regulation of transcription factors, plants resist to various abiotic and biotic stresses. NAC (NAM, ATAF1/2, CUC2) are one of the largest families of plant-specific transcription factors and known to play important roles in plant development and response to environmental stresses. A new NAC gene was cl...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2760-7

    authors: Wang YX

    更新日期:2013-11-01 00:00:00

  • Dopamine D2 receptor gene -141C Insertion/Deletion polymorphism in Turkish schizophrenic patients.

    abstract::Schizophrenia is a chronic and neuropsychiatric disease that affects about 0.5-1% of the world's population. An increase in dopamine and dopamine D2 receptor (DRD2) gene products has been well described in schizophrenic patients. Several groups have studied the relationship between dopaminergic hyperactivity and cellu...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0244-6

    authors: Kurt H,Dikmen M,Basaran A,Yenilmez C,Ozdemir F,Degirmenci I,Gunes HV,Kucuk MU,Mutlu F

    更新日期:2011-02-01 00:00:00

  • Polymorphism of vascular endothelial growth factor -1154G>A (rs1570360) with cancer risk: a meta-analysis of 16 case-control studies.

    abstract::Published data on the association of vascular endothelial growth factor (VEGF) -1154G>A polymorphism with cancer risk is inconclusive. To derive a more precise estimation of association between VEGF -1154G>A polymorphism and the risk of cancer, we performed a meta-analysis of 7,071 cancer cases and 7,693 controls from...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-011-1326-9

    authors: Hong TT,Zhang RX,Wu XH,Hua D

    更新日期:2012-05-01 00:00:00

  • CD40 signal expression in gastric cancer tissue and its correlation with prognosis of gastric cancer patients.

    abstract::CD40 signaling plays a critical role in the survival rate of gastric cancer patients. Tumour samples were collected from 73 patients with who were diagnosed as gastric cancer in general surgery department in the 1st affiliated hospital of Suzhou University between September 2002 and July 2003. All patients had not rec...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1734-5

    authors: Li R,Chen WC,Pang XQ,Tian WY,Wang WP,Zhang XG

    更新日期:2012-09-01 00:00:00

  • Lauric acid alleviates insulin resistance by improving mitochondrial biogenesis in THP-1 macrophages.

    abstract::Mitochondrial dysfunction plays a crucial role in the central pathogenesis of insulin resistance and type 2 diabetes mellitus. Macrophages play important roles in the pathogenesis of insulin resistance. Lauric acid is a 12-carbon medium chain fatty acid (MCFA) found abundantly in coconut oil or palm kernel oil and it ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-06019-9

    authors: Tham YY,Choo QC,Muhammad TST,Chew CH

    更新日期:2020-12-01 00:00:00

  • Oxidative stress induced by high-glucose diet in liver of C57BL/6J mice and its underlying mechanism.

    abstract::High glycemic index diet can induce multiple diseases. Many research indicated that oxidative stress played important role in many pathological conditions. However, the impact of gene expression and dietary habit on oxidation process are still less clear. We used high-glucose diet to feed C57BL/6J mice for 4 weeks, me...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0039-9

    authors: Du D,Shi YH,Le GW

    更新日期:2010-12-01 00:00:00

  • Genome sequence analysis provides insights on genomic variation and late blight resistance genes in potato somatic hybrid (parents and progeny).

    abstract::Wild Solanum species are the important resources for potato improvement. With the availability of potato genome and sequencing progress, knowledge about genomic resources is essential for novel genes discovery. Hence, the aim of this study was to decipher draft genome sequences of unique potato genotypes i.e. somatic ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-06106-x

    authors: Tiwari JK,Rawat S,Luthra SK,Zinta R,Sahu S,Varshney S,Kumar V,Dalamu D,Mandadi N,Kumar M,Chakrabarti SK,Rao AR,Rai A

    更新日期:2021-01-13 00:00:00

  • Glutamate receptors and signal transduction in learning and memory.

    abstract::The plasticity of the central nervous system helps form the basis for the neurobiology of learning and memory. Long-term potentiation (LTP) is the main form of synaptic plasticity, reflecting the activity level of the synaptic information storage process, and provides a good model to study the underlying mechanisms of...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-010-0128-9

    authors: Peng S,Zhang Y,Zhang J,Wang H,Ren B

    更新日期:2011-01-01 00:00:00

  • A strategy based on Amplified Fragment Length Polymorphism (AFLP) for routine genotyping of nontuberculous mycobacteria at the clinical laboratory.

    abstract::The increasing worldwide incidence of mycobacteriosis and the need to achieve improved clinical management makes nontuberculous mycobacteria (NTM) genotyping a useful tool. However, because of technical difficulties, medium size microbiology laboratories do not attempt to compare the genetic patterns that each of thei...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05420-8

    authors: Blanco-Conde S,González-Cortés C,López-Medrano R,Palacios-Gutiérrez JJ,Diez-Tascón C,Nebreda-Mayoral T,Sierra-García MJ,Rivero-Lezcano OM

    更新日期:2020-05-01 00:00:00

  • Angiotensin-converting enzyme gene polymorphism and allele frequencies in the Lebanese population: prevalence and review of the literature.

    abstract::We studied the distribution of the D/D, I/D, and I/I genotypes of the angiotensin-converting enzyme (ACE) in a sample of healthy Lebanese individuals to assess their prevalence and compare them with other populations. ACE genotypes were determined using the Cardiovascular Disease (CVD) StripAssay, which is based on a ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-006-9013-y

    authors: Sabbagh AS,Otrock ZK,Mahfoud ZR,Zaatari GS,Mahfouz RA

    更新日期:2007-03-01 00:00:00

  • Dysregulated lipid metabolism in hepatocellular carcinoma cancer stem cells.

    abstract::According to the stem cell theory for cancer, hepatocellular carcinomas are sustained by a group of cancer stem cells (CSCs) which are responsible for resistance to chemotherapy. In the present study we aimed to examine lipid metabolism in cancer stem cells induced by long-term treatment with sorafenib and its relatio...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05352-3

    authors: Bort A,Sánchez BG,de Miguel I,Mateos-Gómez PA,Diaz-Laviada I

    更新日期:2020-04-01 00:00:00