Dynamic Granger-Geweke causality modeling with application to interictal spike propagation.

Abstract:

:A persistent problem in developing plausible neurophysiological models of perception, cognition, and action is the difficulty of characterizing the interactions between different neural systems. Previous studies have approached this problem by estimating causal influences across brain areas activated during cognitive processing using structural equation modeling (SEM) and, more recently, with Granger-Geweke causality. While SEM is complicated by the need for a priori directional connectivity information, the temporal resolution of dynamic Granger-Geweke estimates is limited because the underlying autoregressive (AR) models assume stationarity over the period of analysis. We have developed a novel optimal method for obtaining data-driven directional causality estimates with high temporal resolution in both time and frequency domains. This is achieved by simultaneously optimizing the length of the analysis window and the chosen AR model order using the SURE criterion. Dynamic Granger-Geweke causality in time and frequency domains is subsequently calculated within a moving analysis window. We tested our algorithm by calculating the Granger-Geweke causality of epileptic spike propagation from the right frontal lobe to the left frontal lobe. The results quantitatively suggested that the epileptic activity at the left frontal lobe was propagated from the right frontal lobe, in agreement with the clinical diagnosis. Our novel computational tool can be used to help elucidate complex directional interactions in the human brain.

journal_name

Hum Brain Mapp

journal_title

Human brain mapping

authors

Lin FH,Hara K,Solo V,Vangel M,Belliveau JW,Stufflebeam SM,Hämäläinen MS

doi

10.1002/hbm.20772

subject

Has Abstract

pub_date

2009-06-01 00:00:00

pages

1877-86

issue

6

eissn

1065-9471

issn

1097-0193

journal_volume

30

pub_type

杂志文章
  • Consciousness and cerebral baseline activity fluctuations.

    abstract::The origin of within-subject variability in perceptual experiments is poorly understood. We here review evidence that baseline brain activity in the areas involved in sensory perception predict subsequent variations in sensory awareness. We place these findings in light of recent findings on the architecture of sponta...

    journal_title:Human brain mapping

    pub_type: 杂志文章,评审

    doi:10.1002/hbm.20602

    authors: Boly M,Phillips C,Balteau E,Schnakers C,Degueldre C,Moonen G,Luxen A,Peigneux P,Faymonville ME,Maquet P,Laureys S

    更新日期:2008-07-01 00:00:00

  • Sensitive period for white-matter connectivity of superior temporal cortex in deaf people.

    abstract::Previous studies have shown that white matter in the deaf brain changes due to hearing loss. However, how white-matter development is influenced by early hearing experience of deaf people is still unknown. Using diffusion tensor imaging and tract-based spatial statistics, we compared white-matter structures among thre...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.21215

    authors: Li Y,Ding G,Booth JR,Huang R,Lv Y,Zang Y,He Y,Peng D

    更新日期:2012-02-01 00:00:00

  • The timing of temporoparietal and frontal activations during mental own body transformations from different visuospatial perspectives.

    abstract::The perspective from where the world is perceived is an important aspect of the bodily self and may break down in neurological conditions such as out-of-body experiences (OBEs). These striking disturbances are characterized by disembodiment, an external perspective and have been observed after temporoparietal damage. ...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20764

    authors: Schwabe L,Lenggenhager B,Blanke O

    更新日期:2009-06-01 00:00:00

  • Cortical thickness as predictor of response to exercise in people with Parkinson's disease.

    abstract::We previously showed that dual-task cost (DTC) on gait speed in people with Parkinson's disease (PD) improved after 6 weeks of the Agility Boot Camp with Cognitive Challenge (ABC-C) exercise program. Since deficits in dual-task gait speed are associated with freezing of gait and gray matter atrophy, here we performed ...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.25211

    authors: Silva-Batista C,Ragothaman A,Mancini M,Carlson-Kuhta P,Harker G,Jung SH,Nutt JG,Fair DA,Horak FB,Miranda-Domínguez O

    更新日期:2021-01-01 00:00:00

  • Decoding facial expressions based on face-selective and motion-sensitive areas.

    abstract::Humans can easily recognize others' facial expressions. Among the brain substrates that enable this ability, considerable attention has been paid to face-selective areas; in contrast, whether motion-sensitive areas, which clearly exhibit sensitivity to facial movements, are involved in facial expression recognition re...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.23578

    authors: Liang Y,Liu B,Xu J,Zhang G,Li X,Wang P,Wang B

    更新日期:2017-06-01 00:00:00

  • Speed of saccade execution and inhibition associated with fractional anisotropy in distinct fronto-frontal and fronto-striatal white matter pathways.

    abstract::Fast cancellation or switching of action plans is a critical cognitive function. Rapid signal transmission is key for quickly executing and inhibiting responses, and the structural integrity of connections between brain regions plays a crucial role in signal transmission speed. In this study, we used the search-step t...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.23209

    authors: Thakkar KN,van den Heiligenberg FM,Kahn RS,Neggers SF

    更新日期:2016-08-01 00:00:00

  • The influence of positive and negative emotional associations on semantic processing in depression: an fMRI study.

    abstract::In depression, patients suffer from emotional and cognitive deficits, among others in semantic processing. If these semantic deficits are cognitive or interact with emotional dysfunctions, is still an open question. The aim of the current study was to investigate the influence of emotional valence on the neural correl...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22186

    authors: Sass K,Habel U,Kellermann T,Mathiak K,Gauggel S,Kircher T

    更新日期:2014-02-01 00:00:00

  • Distributed cell assemblies for general lexical and category-specific semantic processing as revealed by fMRI cluster analysis.

    abstract::Here, we ask whether frontotemporal cortex is functionally dissociated into distributed lexical and category-specific semantic networks. To this end, fMRI activation patterns elicited during the processing of words from different semantic categories were categorized using k-means cluster algorithms. Results showed a d...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20811

    authors: Pulvermüller F,Kherif F,Hauk O,Mohr B,Nimmo-Smith I

    更新日期:2009-12-01 00:00:00

  • Spatial-temporal structures of human alpha rhythms: theory, microcurrent sources, multiscale measurements, and global binding of local networks.

    abstract::A theoretical framework supporting experimental measures of dynamic properties of human EEG is proposed with emphasis on distinct alpha rhythms. Robust relationships between measured dynamics and cognitive or behavioral conditions are reviewed, and proposed physiological bases for EEG at cellular levels are considered...

    journal_title:Human brain mapping

    pub_type: 杂志文章,评审

    doi:10.1002/hbm.1030

    authors: Nunez PL,Wingeier BM,Silberstein RB

    更新日期:2001-07-01 00:00:00

  • Topographical relationships between arcuate fasciculus connectivity and cortical thickness.

    abstract::The arcuate fasciculus (AF) connects cortical regions important in language processing, but how fiber coherence and organization relates to gray matter macrostructure remains uncharacterized. We used high-resolution structural and 30-direction diffusion imaging data from 36 healthy adults (24 male/12 female; mean age,...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.21147

    authors: Phillips OR,Clark KA,Woods RP,Subotnik KL,Asarnow RF,Nuechterlein KH,Toga AW,Narr KL

    更新日期:2011-11-01 00:00:00

  • Atypical brain activation patterns during a face-to-face joint attention game in adults with autism spectrum disorder.

    abstract::Joint attention behaviors include initiating one's own and responding to another's bid for joint attention to an object, person, or topic. Joint attention abilities in autism are pervasively atypical, correlate with development of language and social abilities, and discriminate children with autism from other developm...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22086

    authors: Redcay E,Dodell-Feder D,Mavros PL,Kleiner M,Pearrow MJ,Triantafyllou C,Gabrieli JD,Saxe R

    更新日期:2013-10-01 00:00:00

  • Neural decoding of visual stimuli varies with fluctuations in global network efficiency.

    abstract::Functional magnetic resonance imaging (fMRI) studies have shown that neural activity fluctuates spontaneously between different states of global synchronization over a timescale of several seconds. Such fluctuations generate transient states of high and low correlation across distributed cortical areas. It has been hy...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.23574

    authors: Cocchi L,Yang Z,Zalesky A,Stelzer J,Hearne LJ,Gollo LL,Mattingley JB

    更新日期:2017-06-01 00:00:00

  • Linear and nonlinear interrelations show fundamentally distinct network structure in preictal intracranial EEG of epilepsy patients.

    abstract::Resection of the seizure generating tissue can be highly beneficial in patients with drug-resistant epilepsy. However, only about half of all patients undergoing surgery get permanently and completely seizure free. Investigating the dependences between intracranial EEG signals adds a multivariate perspective largely u...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.24816

    authors: Müller M,Caporro M,Gast H,Pollo C,Wiest R,Schindler K,Rummel C

    更新日期:2020-02-01 00:00:00

  • Serotonin transporter gene methylation is associated with hippocampal gray matter volume.

    abstract:BACKGROUND:The serotonin transporter (5-HTT) and the 5-HTTLPR/rs25531 polymorphisms in its gene (SLC6A4) have been associated with depression, increased stress-response, and brain structural alterations such as reduced hippocampal volumes. Recently, epigenetic processes including SLC6A4 promoter methylation were shown ...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22555

    authors: Dannlowski U,Kugel H,Redlich R,Halik A,Schneider I,Opel N,Grotegerd D,Schwarte K,Schettler C,Ambrée O,Rust S,Domschke K,Arolt V,Heindel W,Baune BT,Suslow T,Zhang W,Hohoff C

    更新日期:2014-11-01 00:00:00

  • Heritability of regional and global brain structure at the onset of puberty: a magnetic resonance imaging study in 9-year-old twin pairs.

    abstract::Puberty represents the phase of sexual maturity, signaling the change from childhood into adulthood. During childhood and adolescence, prominent changes take place in the brain. Recently, variation in frontal, temporal, and parietal areas was found to be under varying genetic control between 5 and 19 years of age. How...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20660

    authors: Peper JS,Schnack HG,Brouwer RM,Van Baal GC,Pjetri E,Székely E,van Leeuwen M,van den Berg SM,Collins DL,Evans AC,Boomsma DI,Kahn RS,Hulshoff Pol HE

    更新日期:2009-07-01 00:00:00

  • White matter abnormalities associated with military PTSD in the context of blast TBI.

    abstract::Mild traumatic brain injury (mTBI) and post-traumatic stress disorder (PTSD) are common among recent military veterans and involve substantial symptom overlap, making clinical distinction and effective intervention difficult. Emerging evidence of cerebral white matter abnormalities associated with mTBI may provide a b...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22685

    authors: Davenport ND,Lim KO,Sponheim SR

    更新日期:2015-03-01 00:00:00

  • Regional hippocampal vulnerability in early multiple sclerosis: Dynamic pathological spreading from dentate gyrus to CA1.

    abstract:BACKGROUND:Whether hippocampal subfields are differentially vulnerable at the earliest stages of multiple sclerosis (MS) and how this impacts memory performance is a current topic of debate. METHOD:We prospectively included 56 persons with clinically isolated syndrome (CIS) suggestive of MS in a 1-year longitudinal st...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.23970

    authors: Planche V,Koubiyr I,Romero JE,Manjon JV,Coupé P,Deloire M,Dousset V,Brochet B,Ruet A,Tourdias T

    更新日期:2018-04-01 00:00:00

  • Longitudinal associations between white matter maturation and cognitive development across early childhood.

    abstract::From birth to 5 years of age, brain structure matures and evolves alongside emerging cognitive and behavioral abilities. In relating concurrent cognitive functioning and measures of brain structure, a major challenge that has impeded prior investigation of their time-dynamic relationships is the sparse and irregular n...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.24690

    authors: Dai X,Hadjipantelis P,Wang JL,Deoni SCL,Müller HG

    更新日期:2019-10-01 00:00:00

  • Neural activity during working memory encoding, maintenance, and retrieval: A network-based model and meta-analysis.

    abstract::It remains unclear whether and to what extent working memory (WM) temporal subprocesses (i.e., encoding, maintenance, and retrieval) involve shared or distinct intrinsic networks. To address this issue, I constructed a model of intrinsic network contributions to different WM phases and then evaluated the validity of t...

    journal_title:Human brain mapping

    pub_type: 杂志文章,meta分析

    doi:10.1002/hbm.24747

    authors: Kim H

    更新日期:2019-12-01 00:00:00

  • Altered prefrontal activity and connectivity predict different cognitive deficits in schizophrenia.

    abstract:BACKGROUND:Cognitive dysfunction is considered a core feature of schizophrenia, and impaired performances in episodic memory (EM) and executive function (EF) tasks are consistently reported in schizophrenia patients. Traditional fMRI and EEG studies have helped identifying brain areas, including the prefrontal cortex (...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22935

    authors: Ferrarelli F,Riedner BA,Peterson MJ,Tononi G

    更新日期:2015-11-01 00:00:00

  • Neural substrates differentiating global/local processing of bilateral visual inputs.

    abstract::We investigated neural substrates of global/local processing of bilateral hierarchical stimuli using functional magnetic resonance imaging (fMRI). Subjects were presented with two compound letters that were displayed simultaneously in the left and right visual fields, respectively. In a steady-state, block-design para...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20044

    authors: Han S,Jiang Y,Gu H

    更新日期:2004-08-01 00:00:00

  • The cerebellum shrinks faster than normal ageing in Alzheimer's disease but not in mild cognitive impairment.

    abstract:BACKGROUND:While acceleration in age-related cerebral atrophy has been well documented in Alzheimer's disease, the cerebellar contributions to this effect have not been thoroughly investigated. OBJECTIVE:This study investigated cerebellar volume and atrophy rate using magnetic resonance imaging in individuals with nor...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.23580

    authors: Tabatabaei-Jafari H,Walsh E,Shaw ME,Cherbuin N,Alzheimer's Disease Neuroimaging Initiative (ADNI).

    更新日期:2017-06-01 00:00:00

  • The human mirror neuron system in a population with deficient self-awareness: an fMRI study in alexithymia.

    abstract::The mirror neuron system (MNS) is considered crucial for human imitation and language learning and provides the basis for the development of empathy and mentalizing. Alexithymia (ALEX), which refers to deficiencies in the self-awareness of emotional states, has been reported to be associated with poor ability in vario...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20653

    authors: Moriguchi Y,Ohnishi T,Decety J,Hirakata M,Maeda M,Matsuda H,Komaki G

    更新日期:2009-07-01 00:00:00

  • Alterations in intrinsic fronto-thalamo-parietal connectivity are associated with cognitive control deficits in psychotic disorders.

    abstract::Despite a growing number of reports about alterations in intrinsic/resting brain activity observed in patients with psychotic disorders, their relevance to well-established cognitive control deficits in this patient group is not well understood. Totally 88 clinically stabilized patients with a psychotic disorder and 5...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.24362

    authors: Lencer R,Yao L,Reilly JL,Keedy SK,McDowell JE,Keshavan MS,Pearlson GD,Tamminga CA,Gershon ES,Clementz BA,Lui S,Sweeney JA

    更新日期:2019-01-01 00:00:00

  • Brain systems involved in arithmetic with positive versus negative numbers.

    abstract::Positive number arithmetic is based on combining and separating sets of items, with systematic differences in brain activity in specific regions depending on operation. In contrast, arithmetic with negative numbers involves manipulating abstract values worth less than zero, possibly involving different operation-activ...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22201

    authors: Gullick MM,Wolford G

    更新日期:2014-02-01 00:00:00

  • Predicting and memorizing observed action: differential premotor cortex involvement.

    abstract::Many studies have shown the involvement of the premotor cortex in action observation, recognizing this region as the neural marker of action simulation (i.e., internal modeling on the basis of the observer's own motor repertoire). So far, however, we have remained unaware of how action simulation differs from more gen...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20949

    authors: Stadler W,Schubotz RI,von Cramon DY,Springer A,Graf M,Prinz W

    更新日期:2011-05-01 00:00:00

  • Automated post-hoc noise cancellation tool for audio recordings acquired in an MRI scanner.

    abstract::There are several types of experiment in which it is useful to have subjects speak overtly in a magnetic resonance imaging (MRI) scanner, including those studying the articulatory apparatus and the neural basis of speech production, and fMRI experiments in which speech is used as a response modality. Although it is re...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20085

    authors: Cusack R,Cumming N,Bor D,Norris D,Lyzenga J

    更新日期:2005-04-01 00:00:00

  • Functional centrality of amygdala, striatum and hypothalamus in a "small-world" network underlying joy: an fMRI study with music.

    abstract::Current knowledge about small-world networks underlying emotions is sparse, and confined to functional magnetic resonance imaging (fMRI) studies using resting-state paradigms. This fMRI study applied Eigenvector Centrality Mapping (ECM) and functional connectivity analysis to reveal neural small-world networks underly...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.22416

    authors: Koelsch S,Skouras S

    更新日期:2014-07-01 00:00:00

  • A comparison of Granger causality and coherency in fMRI-based analysis of the motor system.

    abstract::The ability of functional MRI to acquire data from multiple brain areas has spurred developments not only in voxel-by-voxel analyses, but also in multivariate techniques critical to quantifying the interactions between brain areas. As the number of multivariate techniques multiplies, however, few studies in any modali...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20771

    authors: Kayser AS,Sun FT,D'Esposito M

    更新日期:2009-11-01 00:00:00

  • Cognitive processing in Chinese literate and illiterate subjects: an fMRI study.

    abstract::Functional magnetic resonance imaging (fMRI) and positron emission tomography (PET) were used to map brain activation during language tasks. While previous studies have compared performance between alphabetic literate and illiterate subjects, there have been no such data in Chinese-speaking individuals. In this study,...

    journal_title:Human brain mapping

    pub_type: 杂志文章

    doi:10.1002/hbm.20173

    authors: Li G,Cheung RT,Gao JH,Lee TM,Tan LH,Fox PT,Jack CR Jr,Yang ES

    更新日期:2006-02-01 00:00:00