Bacterioplankton growth on fractions of dissolved organic carbon of different molecular weights from humic and clear waters.

Abstract:

:The ability of fractions of dissolved organic carbon (DOC) of different molecular weights (MW) to support bacterial growth was studied in batch culture experiments. Natural pelagic bacteria were inoculated into particle-free (0.2-mum filtered) water, taken from 10 oligotrophic lakes of differing humic content, and either used without further treatments or ultrafiltered to remove DOC of >10,000 MW or >1,000 MW. Stationaryphase abundance of bacteria in the cultures was used as an estimate of bacterial carrying capacity. High-MW DOC (>10,000) comprised an increasing fraction of total DOC with increasing total DOC and humic content of the lakes. High-MW DOC was generally more available to bacteria (i.e., more bacteria were produced per unit of organic carbon initially present) than low-MW (<10,000) DOC. The availability to bacteria of this high-MW DOC decreased with increasing humic content. However, although less available in humic lakes than in clearwater lakes, the higher abundance of high-MW DOC made it quantitatively more important as a bacterial substrate; i.e., a larger fraction of the total bacterial yield of the cultures was due to high-MW DOC compounds in humic lakes than in clearwater lakes. On the average, 48% of bacterial growth occurred at the expense of DOC of <10,000 MW. DOC of <1,000 MW was responsible for an average of 22% of bacterial growth, with no significant correlation to humic content and DOC concentration of lakes. The DOC which supports bacterial growth, as well as the total DOC, is of different quality in humic and clearwater lakes.

journal_name

Appl Environ Microbiol

authors

Tranvik LJ

doi

10.1128/AEM.56.6.1672-1677.1990

keywords:

subject

Has Abstract

pub_date

1990-06-01 00:00:00

pages

1672-7

issue

6

eissn

0099-2240

issn

1098-5336

journal_volume

56

pub_type

杂志文章
  • Toxic shock syndrome toxin 1 (TSST-1) production by staphylococci isolated from goats and presence of specific antibodies to TSST-1 in serum and milk.

    abstract::The ability of staphylococcal strains isolated from different anatomical sites in 133 healthy goats to produce toxic shock syndrome toxin 1 (TSST-1) and the presence of antibodies to this toxin in serum and milk were studied. The enzyme-linked immunosorbent assay method was used to detect both the toxin and the presen...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.57.3.889-891.1991

    authors: Valle J,Vadillo S,Piriz S,Gomez-Lucia E

    更新日期:1991-03-01 00:00:00

  • Thermostable NAD-linked secondary alcohol dehydrogenase from propane-grown Pseudomonas fluorescens NRRL B-1244.

    abstract::NAD-linked alcohol dehydrogenase activity was detected in cell-free crude extracts from various propane-grown bacteria. Two NAD-linked alcohol dehydrogenases, one which preferred primary alcohols (alcohol dehydrogenase I) and another which preferred secondary alcohols (alcohol dehydrogenase II), were found in propane-...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.46.1.98-105.1983

    authors: Hou CT,Patel RN,Laskin AI,Barist I,Barnabe N

    更新日期:1983-07-01 00:00:00

  • Purification, characterization, and gene cloning of a novel maltosyltransferase from an Arthrobacter globiformis strain that produces an alternating alpha-1,4- and alpha-1,6-cyclic tetrasaccharide from starch.

    abstract::A glycosyltransferase, involved in the synthesis of cyclic maltosylmaltose [CMM; cyclo-{-->6)-alpha-D-Glcp(1-->4)-alpha-D-Glcp(1-->6)-alpha-D-Glcp(1-->4)-alpha-D-Glcp(1-->}] from starch, was purified to homogeneity from the culture supernatant of Arthrobacter globiformis M6. The CMM-forming enzyme had a molecular mass...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.72.2.1065-1071.2006

    authors: Mukai K,Watanabe H,Kubota M,Chaen H,Fukuda S,Kurimoto M

    更新日期:2006-02-01 00:00:00

  • Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions.

    abstract::Chitin is an abundant biopolymer whose degradation is mediated primarily by bacterial chitinases. We developed a degenerate PCR primer set to amplify a approximately 900-bp fragment of family 18, group I chitinase genes and used it to retrieve these gene fragments from environmental samples. Clone libraries of presump...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.70.12.6977-6983.2004

    authors: LeCleir GR,Buchan A,Hollibaugh JT

    更新日期:2004-12-01 00:00:00

  • The functional ccpA gene is required for carbon catabolite repression in Lactobacillus plantarum.

    abstract::We report the characterization of the ccpA gene of Lactobacillus plantarum, coding for catabolite control protein A. The gene is linked to the pepQ gene, encoding a proline peptidase, in the order ccpA-pepQ, with the two genes transcribed in tandem from the same strand as distinct transcriptional units. Two ccpA trans...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.67.7.2903-2907.2001

    authors: Muscariello L,Marasco R,De Felice M,Sacco M

    更新日期:2001-07-01 00:00:00

  • Growth reduction of Listeria spp. caused by undefined industrial red smear cheese cultures and bacteriocin-producing Brevibacterium lines as evaluated in situ on soft cheese.

    abstract::The undefined microbial floras derived from the surface of ripe cheese which are used for the ripening of commercial red smear cheeses have a strong impact on the growth of Listeria spp. In some cases, these microbial consortia inhibit Listeria almost completely. From such undefined industrial cheese-ripening floras, ...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.63.12.4812-4817.1997

    authors: Eppert I,Valdés-Stauber N,Götz H,Busse M,Scherer S

    更新日期:1997-12-01 00:00:00

  • Isolation of a single-stranded plasmid from Clostridium acetobutylicum NCIB 6444.

    abstract::The cryptic plasmid pDM6 was isolated from late exponential-phase cells of Clostridium acetobutylicum NCIB 6444 by either alkaline lysis or electroporation. The application of high voltage during electroporation resulted in higher DNA yield than did the alkaline lysis procedure. However, electroporation-induced plasmi...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.56.6.1725-1728.1990

    authors: Kim AY,Vertes AA,Blaschek HP

    更新日期:1990-06-01 00:00:00

  • Lignin Degradation and Modification by the Soil-Inhabiting Fungus Fusarium proliferatum.

    abstract::A soil-inhabiting Fusarium proliferatum strain was capable of transforming or degrading nonlabeled and (sup14)C-labeled industrial, natural, and synthetic lignin. The mineralization rate per day (expressed as the percentage of added radioactivity recovered as to (sup14)CO(inf2)) was maximal during primary metabolism. ...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.63.9.3716-3718.1997

    authors: Regalado V,Rodriguez A,Perestelo F,Carnicero A,De La Fuente G,Falcon MA

    更新日期:1997-09-01 00:00:00

  • Microbial transformation of polycyclic aromatic hydrocarbons in pristine and petroleum-contaminated sediments.

    abstract::To determine rates of microbial transformation of polycyclic aromatic hydrocarbons (PAH) in freshwater sediments, C-labeled PAH were incubated with samples from both pristine and petroleum-contaminated streams. Evolved CO(2) was trapped in KOH, unaltered PAH and polar metabolic intermediate fractions were quantitated ...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.35.2.306-316.1978

    authors: Herbes SE,Schwall LR

    更新日期:1978-02-01 00:00:00

  • Transgalactosylation in a water-solvent biphasic reaction system with beta-galactosidase displayed on the surfaces of Bacillus subtilis spores.

    abstract::The ever-increasing industrial demand for biocatalysis necessitates innovations in the preparation and stabilization of biocatalysts. In this study, we demonstrated that beta-galactosidase (beta-Gal) displayed on Bacillus spores by fusion to the spore coat proteins (CotG) may be used as a whole-cell immobilized biocat...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.01489-06

    authors: Kwon SJ,Jung HC,Pan JG

    更新日期:2007-04-01 00:00:00

  • Improvement of the fungal biocontrol agent Trichoderma atroviride to enhance both antagonism and induction of plant systemic disease resistance.

    abstract::Biocontrol agents generally do not perform well enough under field conditions to compete with chemical fungicides. We determined whether transgenic strain SJ3-4 of Trichoderma atroviride, which expresses the Aspergillus niger glucose oxidase-encoding gene, goxA, under a homologous chitinase (nag1) promoter had increas...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.71.7.3959-3965.2005

    authors: Brunner K,Zeilinger S,Ciliento R,Woo SL,Lorito M,Kubicek CP,Mach RL

    更新日期:2005-07-01 00:00:00

  • Propagation of Rhizopus javanicus Biosorbent.

    abstract::After propagation of Rhizopus javanicus in defined media containing glucose, urea, and mineral salts in deionized distilled water, the ability of the nonliving biomass to sequester cupric ion was assayed. Growth, uptake capacity (saturation uptake at >1 mM Cu concentration in solution), and biosorptive yield (biomass ...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.48.1.137-141.1984

    authors: Treen-Sears ME,Martin SM,Volesky B

    更新日期:1984-07-01 00:00:00

  • Characteristics of environmental isolates of Legionella pneumophila.

    abstract::Thirty-eight cultures of Legionella pneumophila isolated from surface waters were characterized by their morphological, tinctorial, biochemical, and serological properties and by their ability to produce disease in guinea pigs. Their susceptibility to antimicrobial agents also was tested. When they were compared with...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.42.1.109-115.1981

    authors: Orrison LH,Cherry WB,Fliermans CB,Dees SB,McDougal LK,Dodd DJ

    更新日期:1981-07-01 00:00:00

  • Factors Affecting the Germination of Akinetes of Nodularia spumigena (Cyanobacteriaceae).

    abstract::Nutritional and physical factors which influence the germination of akinetes of Nodularia spumigena (Cyanobacteriaceae) were examined. Low concentrations of phosphorus (<0.9 muM) were required for germination. Nitrate had no effect, but ammonia, at concentrations of >45 muM, inhibited germination. Salinities of >20 pe...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.49.1.73-78.1985

    authors: Huber AL

    更新日期:1985-01-01 00:00:00

  • A Counterselectable Sucrose Sensitivity Marker Permits Efficient and Flexible Mutagenesis in Streptococcus agalactiae.

    abstract::Streptococcus agalactiae (group B Streptococcus [GBS]) is a cause of severe infections, particularly during the newborn period. While methods exist for generating chromosomal mutations in GBS, they are cumbersome and inefficient and present significant challenges if the goal is to study subtle mutations, such as singl...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.03009-18

    authors: Hooven TA,Bonakdar M,Chamby AB,Ratner AJ

    更新日期:2019-03-22 00:00:00

  • Microbial isotopic fractionation of perchlorate chlorine.

    abstract::Perchlorate contamination can be microbially respired to innocuous chloride and thus can be treated effectively. However, monitoring a bioremediative strategy is often difficult due to the complexities of environmental samples. Here we demonstrate that microbial respiration of perchlorate results in a significant frac...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/aem.69.8.4997-5000.2003

    authors: Coleman ML,Ader M,Chaudhuri S,Coates JD

    更新日期:2003-08-01 00:00:00

  • Dynamics of ruminal ciliated protozoa in feedlot cattle.

    abstract::Fluctuations in ciliated protozoan concentrations were monitored in 40 individually fed crossbred heifers that were stepped up to an 85% concentrate diet either slowly (12 days) or rapidly (3 days), with or without monensin (30 ppm). Ruminal fluid was withdrawn from all animals by stomach tube at the start of the stud...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.56.10.3174-3178.1990

    authors: Towne G,Nagaraja TG,Brandt RT Jr,Kemp KE

    更新日期:1990-10-01 00:00:00

  • Construction and expression of sugar kinase transcriptional gene fusions by using the Sinorhizobium meliloti ORFeome.

    abstract::The Sinorhizobium meliloti ORFeome project cloned 6,314 open reading frames (ORFs) into a modified Gateway entry vector system from which the ORFs could be transferred to destination vectors in vivo via bacterial conjugation. In this work, a reporter gene destination vector, pMK2030, was constructed and used to genera...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.01468-08

    authors: Humann JL,Schroeder BK,Mortimer MW,House BL,Yurgel SN,Maloney SC,Ward KL,Fallquist HM,Ziemkiewicz HT,Kahn ML

    更新日期:2008-11-01 00:00:00

  • The extracellular metalloprotease of Vibrio tubiashii is a major virulence factor for pacific oyster (Crassostrea gigas) larvae.

    abstract::Vibrio tubiashii is a recently reemerging pathogen of larval bivalve mollusks, causing both toxigenic and invasive disease. Marine Vibrio spp. produce an array of extracellular products as potential pathogenicity factors. Culture supernatants of V. tubiashii have been shown to be toxic to oyster larvae and were report...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.00061-08

    authors: Hasegawa H,Lind EJ,Boin MA,Häse CC

    更新日期:2008-07-01 00:00:00

  • Specimen housing unit for cinemicrographic studies in the vertical plane.

    abstract::A compact housing unit for low-power (X6 to X50) cinemicrographic studies of microbial specimens in the vertical plane is described. This unit was used successfully to record the development of a "halo" of cells around subsurface colonies of Escherichia coli. ...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.32.2.294-297.1976

    authors: Wilkins JR,Tynan CI Jr,Boykin EH

    更新日期:1976-08-01 00:00:00

  • Effect of nematodes on rhizosphere colonization by seed-applied bacteria.

    abstract::There is much interest in the use of seed-applied bacteria for biocontrol and biofertilization, and several commercial products are available. However, many attempts to use this strategy fail because the seed-applied bacteria do not colonize the rhizosphere. Mechanisms of rhizosphere colonization may involve active ba...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.70.8.4666-4671.2004

    authors: Knox OG,Killham K,Artz RR,Mullins C,Wilson M

    更新日期:2004-08-01 00:00:00

  • Coupling Secretomics with Enzyme Activities To Compare the Temporal Processes of Wood Metabolism among White and Brown Rot Fungi.

    abstract::Wood-degrading fungi use a sequence of oxidative and hydrolytic mechanisms to loosen lignocellulose and then release and metabolize embedded sugars. These temporal sequences have recently been mapped at high resolution using directional growth on wood wafers, revealing previously obscured dynamics as fungi progressive...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.00159-18

    authors: Presley GN,Panisko E,Purvine SO,Schilling JS

    更新日期:2018-08-01 00:00:00

  • Insights into the diversity of eukaryotes in acid mine drainage biofilm communities.

    abstract::Microscopic eukaryotes are known to have important ecosystem functions, but their diversity in most environments remains vastly unexplored. Here we analyzed an 18S rRNA gene library from a subsurface iron- and sulfur-oxidizing microbial community growing in highly acidic (pH < 0.9) runoff within the Richmond Mine at I...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.02500-08

    authors: Baker BJ,Tyson GW,Goosherst L,Banfield JF

    更新日期:2009-04-01 00:00:00

  • Multimeric hemicellulases facilitate biomass conversion.

    abstract::Two highly active trifunctional hemicellulases were constructed by linking the catalytic portion of a xylanase with an arabinofuranosidase and a xylosidase, using either flexible peptide linkers or linkers containing a cellulose-binding domain. The multifunctional enzymes retain the parental enzyme properties and exhi...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.02181-08

    authors: Fan Z,Wagschal K,Chen W,Montross MD,Lee CC,Yuan L

    更新日期:2009-03-01 00:00:00

  • Using DNA microarrays to identify library-independent markers for bacterial source tracking.

    abstract::Bacterial source tracking is used to apportion fecal pollution among putative sources. Within this context, library-independent markers are genetic or phenotypic traits that can be used to identify the host origin without a need for library-dependent classification functions. The objective of this project was to use m...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.72.3.1843-1851.2006

    authors: Soule M,Kuhn E,Loge F,Gay J,Call DR

    更新日期:2006-03-01 00:00:00

  • Cloning and expression of a novel toxin gene from Bacillus thuringiensis subsp. jegathesan encoding a highly mosquitocidal protein.

    abstract::A gene, designated cry11B, encoding a 81,293-Da crystal protein of Bacillus thuringiensis subsp. jegathesan was cloned by using a gene-specific oligonucleotide probe. The sequence of the Cry11B protein, as deduced from the sequence of the cry11B gene, contains large regions of similarity with the Cry11A toxin (previou...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.61.12.4230-4235.1995

    authors: Delécluse A,Rosso ML,Ragni A

    更新日期:1995-12-01 00:00:00

  • 13C incorporation into signature fatty acids as an assay for carbon allocation in arbuscular mycorrhiza.

    abstract::The ubiquitous arbuscular mycorrhizal fungi consume significant amounts of plant assimilated C, but this C flow has been difficult to quantify. The neutral lipid fatty acid 16:1omega5 is a quantitative signature for most arbuscular mycorrhizal fungi in roots and soil. We measured carbon transfer from four plant specie...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.71.5.2592-2599.2005

    authors: Olsson PA,van Aarle IM,Gavito ME,Bengtson P,Bengtsson G

    更新日期:2005-05-01 00:00:00

  • Ethylene Dibromide Mineralization in Soils under Aerobic Conditions.

    abstract::1,2-Dibromoethane (EDB), which is a groundwater contaminant in areas where it was once used as a soil fumigant, was shown to be degraded aerobically by microorganisms in two types of surface soils from an EDB-contaminated groundwater discharge area. At initial concentrations of 6 to 8 mug/liter, EDB was degraded in a ...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.51.3.588-592.1986

    authors: Pignatello JJ

    更新日期:1986-03-01 00:00:00

  • The antifungal protein AFP from Aspergillus giganteus inhibits chitin synthesis in sensitive fungi.

    abstract::The antifungal protein AFP from Aspergillus giganteus is highly effective in restricting the growth of major human- and plant-pathogenic filamentous fungi. However, a fundamental prerequisite for the use of AFP as an antifungal drug is a complete understanding of its mode of action. In this study, we performed several...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.02497-06

    authors: Hagen S,Marx F,Ram AF,Meyer V

    更新日期:2007-04-01 00:00:00

  • Thermal inactivation of desiccation-adapted Salmonella spp. in aged chicken litter.

    abstract::Thermal inactivation of desiccation-adapted Salmonella spp. in aged chicken litter was investigated in comparison with that in a nonadapted control to examine potential cross-tolerance of desiccation-adapted cells to heat treatment. A mixture of four Salmonella serovars was inoculated into the finished compost with 20...

    journal_title:Applied and environmental microbiology

    pub_type: 杂志文章

    doi:10.1128/AEM.01969-13

    authors: Chen Z,Diao J,Dharmasena M,Ionita C,Jiang X,Rieck J

    更新日期:2013-11-01 00:00:00