Mutations in SIN4 and RGR1 cause constitutive expression of MAL structural genes in Saccharomyces cerevisiae.

Abstract:

:Transcription of the Saccharomyces MAL structural genes is induced 40-fold by maltose and requires the MAL-activator and maltose permease. To identify additional players involved in regulating MAL gene expression, we carried out a genetic selection for MAL constitutive mutants. Strain CMY4000 containing MAL1 and integrated copies of MAL61promoter-HIS3 and MAL61promoter-lacZ reporter genes was used to select constitutive mutants. The 29 recessive mutants fall into at least three complementation groups. Group 1 and group 2 mutants exhibit pleiotropic phenotypes and represent alleles of Mediator component genes RGR1 and SIN4, respectively. The rgr1 and sin4 constitutive phenotype does not require either the MAL-activator or maltose permease, indicating that Mediator represses MAL basal expression. Further genetic analysis demonstrates that RGR1 and SIN4 work in a common pathway and each component of the Mediator Sin4 module plays a distinct role in regulating MAL gene expression. Additionally, the Swi/Snf chromatin-remodeling complex is required for full induction, suggesting a role for chromatin remodeling in the regulation of MAL gene expression. A sin4Delta mutation is unable to suppress the defects in MAL gene expression resulting from loss of the Swi/Snf complex component Snf2p. The role of the Mediator in MAL gene regulation is discussed.

journal_name

Genetics

journal_title

Genetics

authors

Wang X,Michels CA

doi

10.1534/genetics.104.029611

keywords:

subject

Has Abstract

pub_date

2004-10-01 00:00:00

pages

747-57

issue

2

eissn

0016-6731

issn

1943-2631

pii

168/2/747

journal_volume

168

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Genetic variability at the esterase-6 locus in natural populations of Drosophila simulans in relation to environmental heterogeneity.

    abstract::The allozymic variation at at the esterase-6 locus examined in fourteen samples of natural populations of Drosophila simulans collected in two different localities. The samples were collected from different species of fruits in the two localities and from banana baits located some meters apart from the fruits. The ana...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: de Albuquerque CM,Napp M

    更新日期:1981-06-01 00:00:00

  • General Methods for Evolutionary Quantitative Genetic Inference from Generalized Mixed Models.

    abstract::Methods for inference and interpretation of evolutionary quantitative genetic parameters, and for prediction of the response to selection, are best developed for traits with normal distributions. Many traits of evolutionary interest, including many life history and behavioral traits, have inherently nonnormal distribu...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.186536

    authors: de Villemereuil P,Schielzeth H,Nakagawa S,Morrissey M

    更新日期:2016-11-01 00:00:00

  • Site-Specific Recombination with Inverted Target Sites: A Cautionary Tale of Dicentric and Acentric Chromosomes.

    abstract::Site-specific recombinases are widely used tools for analysis of genetics, development, and cell biology, and many schemes have been devised to alter gene expression by recombinase-mediated DNA rearrangements. Because the FRT and lox target sites for the commonly used FLP and Cre recombinases are asymmetrical, and mus...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.120.303394

    authors: Titen SWA,Johnson MTB,Capecchi M,Golic KG

    更新日期:2020-08-01 00:00:00

  • A genetic model for control of hypertriglyceridemia and apolipoprotein B levels in the Johns Hopkins colony of St. Thomas Hospital rabbits.

    abstract::The St. Thomas Hospital (STH) rabbit has been previously shown to have a Mendelian form of hypertriglyceridemia, accompanied by accelerated atherosclerosis, and these animals may serve as a useful model for human dyslipoproteinemia syndromes. Here we describe the establishment of a new colony of these STH animals, and...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Beaty TH,Prenger VL,Virgil DG,Lewis B,Kwiterovich PO,Bachorik PS

    更新日期:1992-12-01 00:00:00

  • Genetic and developmental analysis of the locus vnd in Drosophila melanogaster.

    abstract::Genetic and developmental analysis of an X-linked vital locus vnd was undertaken. Embryos hemizygous for the original allele vnd did not hatch and exhibited a disorganized ventral nervous system (VNS). The mutation maps in the region 1B6-7 to 1B9-10, a subregion of an area previously shown to be essential to normal ne...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: White K,DeCelles NL,Enlow TC

    更新日期:1983-07-01 00:00:00

  • Role of the Tsc1-Tsc2 complex in signaling and transport across the cell membrane in the fission yeast Schizosaccharomyces pombe.

    abstract::Heterozygous inactivation of either human TSC1 or TSC2 causes tuberous sclerosis (TSC), in which development of benign tumors, hamartomas, occurs via a two-hit mechanism. In this study, fission yeast genes homologous to TSC1 and TSC2 were identified, and their protein products were shown to physically interact like th...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Matsumoto S,Bandyopadhyay A,Kwiatkowski DJ,Maitra U,Matsumoto T

    更新日期:2002-07-01 00:00:00

  • The genetic structure of natural populations of Drosophila melanogaster. XX. Comparison of genotype-environment interaction in viability between a northern and a southern population.

    abstract::In order to examine the operation of diversifying selection as the maintenance mechanism of excessive additive genetic variance for viability in southern populations in comparison with northern populations of Drosophila melanogaster, two sets of experiments were conducted using second chromosomes extracted from the Og...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Takano T,Kusakabe S,Mukai T

    更新日期:1987-10-01 00:00:00

  • An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL.

    abstract::Methodologies for mapping of genes underlying quantitative traits have advanced considerably but have not been accompanied by a parallel development of new population structures. We present a novel population consisting of 50 introgression lines (ILs) originating from a cross between the green-fruited species Lycopers...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Eshed Y,Zamir D

    更新日期:1995-11-01 00:00:00

  • Human diseases with genetically altered DNA repair processes.

    abstract::DNA repair of single-strand breaks (produced by ionizing radiation) and of base damage (produced by ultraviolet (UV) light) are two repair mechanisms that most mammalian cells possess. Genetic defects in these repair mechanisms are exemplified by cells from the human premature-aging disease, progeria, which fail to re...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Cleaver JE,Bootsma D,Friedberg E

    更新日期:1975-06-01 00:00:00

  • Computerized meiotic mapping in Aspergillus nidulans.

    abstract::A computer system for the storage and processing of microbial meiotic data has been developed. Based on the language Fortran 4, the program retrieves relevant data and determines the order, map distances, and coefficient of coincidence for any three-gene group. Meiotic data from Aspergillus nidulans were used to test ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Dorn GL

    更新日期:1972-12-01 00:00:00

  • Artificial and epigenetic regulation of the I factor, a nonviral retrotransposon of Drosophila melanogaster.

    abstract::The I factor (IF) is a LINE-like transposable element from Drosophila melanogaster. IF is silenced in most strains, but under special circumstances its transposition can be induced and correlates with the appearance of a syndrome of female sterility called hybrid dysgenesis. To elucidate the relationship between IF ex...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Gauthier E,Tatout C,Pinon H

    更新日期:2000-12-01 00:00:00

  • Unlinked noncomplementation: isolation of new conditional-lethal mutations in each of the tubulin genes of Saccharomyces cerevisiae.

    abstract::Mutations in genes of Saccharomyces cerevisiae that code for proteins that interact with beta-tubulin were sought by screening for unlinked mutations that fail to complement mutations in the single beta-tubulin-encoding gene (TUB2). Among the first three noncomplementing mutations examined, two are linked to TUB2 whil...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Stearns T,Botstein D

    更新日期:1988-06-01 00:00:00

  • Variance of neutral genetic variances within and between populations for a quantitative character.

    abstract::The variances of genetic variances within and between finite populations were systematically studied using a general multiple allele model with mutation in terms of identity by descent measures. We partitioned the genetic variances into components corresponding to genetic variances and covariances within and between l...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Zeng ZB,Cockerham CC

    更新日期:1991-10-01 00:00:00

  • Regions of lower crossing over harbor more rare variants in African populations of Drosophila melanogaster.

    abstract::A correlation between diversity levels and rates of recombination is predicted both by models of positive selection, such as hitchhiking associated with the rapid fixation of advantageous mutations, and by models of purifying selection against strongly deleterious mutations (commonly referred to as "background selecti...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Andolfatto P,Przeworski M

    更新日期:2001-06-01 00:00:00

  • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance.

    abstract::I reexamine the use of isolation by distance models as a basis for the estimation of demographic parameters from measures of population subdivision. To that aim, I first provide results for values of F-statistics in one-dimensional models and coalescence times in two-dimensional models, and make more precise earlier r...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Rousset F

    更新日期:1997-04-01 00:00:00

  • Extragenic suppressors of Schizosaccharomyces pombe rad9 mutations uncouple radioresistance and hydroxyurea sensitivity from cell cycle checkpoint control.

    abstract::Schizosaccharomyces pombe cells that contain a mutation within rad9 are sensitive to ionizing radiation, UV light and hydroxyurea, relative to wild-type strains. In addition, the mutants are moderately hypomutable by UV and unable to delay initiation of mitosis after treatment with radiation or hydroxyurea. Three radi...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Lieberman HB

    更新日期:1995-09-01 00:00:00

  • Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci.

    abstract::Dissecting the genes involved in complex traits can be confounded by multiple factors, including extensive epistatic interactions among genes, the involvement of epigenetic regulators, and the variable expressivity of traits. Although quantitative trait locus (QTL) analysis has been a powerful tool for localizing the ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.090175

    authors: Burgess-Herbert SL,Cox A,Tsaih SW,Paigen B

    更新日期:2008-12-01 00:00:00

  • Mutational analysis of the GAL4-encoded transcriptional activator protein of Saccharomyces cerevisiae.

    abstract::The GAL4 protein of Saccharomyces cerevisiae binds to DNA upstream of each of six genes and stimulates their transcription. To locate regions of the protein responsible for these processes, we identified and characterized 88 gal4 mutations selected in vivo to reduce the ability to GAL4 protein to activate transcriptio...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Johnston M,Dover J

    更新日期:1988-09-01 00:00:00

  • Inference and Analysis of Population Structure Using Genetic Data and Network Theory.

    abstract::Clustering individuals to subpopulations based on genetic data has become commonplace in many genetic studies. Inference about population structure is most often done by applying model-based approaches, aided by visualization using distance-based approaches such as multidimensional scaling. While existing distance-bas...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.182626

    authors: Greenbaum G,Templeton AR,Bar-David S

    更新日期:2016-04-01 00:00:00

  • Heritability of nestling growth in cross-fostered European Starlings Sturnus vulgaris.

    abstract::In altricial birds, growth rates and nestling morphology vary between broods. For natural selection to produce evolutionary change in these variables, ther must exist heritable variation. Since nestling traits are not any longer presents in parents, traditional offspring-parent regressions cannot estimate heritabiliti...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Smith HG,Wettermark KJ

    更新日期:1995-10-01 00:00:00

  • The EGL-4 PKG acts with KIN-29 salt-inducible kinase and protein kinase A to regulate chemoreceptor gene expression and sensory behaviors in Caenorhabditis elegans.

    abstract::The regulation of chemoreceptor (CR) gene expression by environmental signals and internal cues may contribute to the modulation of multiple physiological processes and behavior in Caenorhabditis elegans. We previously showed that KIN-29, a homolog of salt-inducible kinase, acts in sensory neurons to regulate the expr...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.094771

    authors: van der Linden AM,Wiener S,You YJ,Kim K,Avery L,Sengupta P

    更新日期:2008-11-01 00:00:00

  • Characterization of the roles of the Saccharomyces cerevisiae RAD54 gene and a homologue of RAD54, RDH54/TID1, in mitosis and meiosis.

    abstract::The RAD54 gene, which encodes a protein in the SWI2/SNF2 family, plays an important role in recombination and DNA repair in Saccharomyces cerevisiae. The yeast genome project revealed a homologue of RAD54, RDH54/TID1. Properties of the rdh54/tid1 mutant and the rad54 rdh54/tid1 double mutant are shown for mitosis and ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Shinohara M,Shita-Yamaguchi E,Buerstedde JM,Shinagawa H,Ogawa H,Shinohara A

    更新日期:1997-12-01 00:00:00

  • Evolutionary Rescue over a Fitness Landscape.

    abstract::Evolutionary rescue describes a situation where adaptive evolution prevents the extinction of a population facing a stressing environment. Models of evolutionary rescue could in principle be used to predict the level of stress beyond which extinction becomes likely for species of conservation concern, or, conversely, ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.118.300908

    authors: Anciaux Y,Chevin LM,Ronce O,Martin G

    更新日期:2018-05-01 00:00:00

  • New insights on homology-dependent silencing of I factor activity by transgenes containing ORF1 in Drosophila melanogaster.

    abstract::I factors in Drosophila melanogaster are non-LTR retrotransposons that transpose at very high frequencies in the germ line of females resulting from crosses between reactive females (devoid of active I factors) and inducer males (containing active I factors). Constructs containing I factor ORF1 under the control of th...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Malinsky S,Bucheton A,Busseau I

    更新日期:2000-11-01 00:00:00

  • Haldane's rule is linked to extraordinary sex ratios and sperm length in stalk-eyed flies.

    abstract::We use three allopatric populations of the stalk-eyed fly Teleopsis dalmanni from Southeast Asia to test two predictions made by the sex chromosome drive hypothesis for Haldane's rule. The first is that modifiers that suppress or enhance drive should evolve rapidly and independently in isolated populations. The second...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.167536

    authors: Wilkinson GS,Christianson SJ,Brand CL,Ru G,Shell W

    更新日期:2014-11-01 00:00:00

  • Chromosomal basis of the merozygosity in a partially deploid mutant of Pneumococcus.

    abstract::A sulfonamide-resistant mutant of pneumococcus, sulr-c, displays a genetic instability, regularly segregating to wild type. DNA extracts of derivatives of the strain possess transforming activities for both the mutant and wild-type alleles, establishing that the strain is a partial diploid. The linkage of sulr-c to st...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Ledbetter ML,Hotchkiss RD

    更新日期:1975-08-01 00:00:00

  • Recombination can partially substitute for SPO13 in regulating meiosis I in budding yeast.

    abstract::Recombination and chromosome synapsis bring homologous chromosomes together, creating chiasmata that ensure accurate disjunction during reductional division. SPO13 is a key gene required for meiosis I (MI) reductional segregation, but dispensable for recombination, in Saccharomyces cerevisiae. Absence of SPO13 leads t...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Rutkowski LH,Esposito RE

    更新日期:2000-08-01 00:00:00

  • Why are there still over 1000 uncharacterized yeast genes?

    abstract::The yeast genetics community has embraced genomic biology, and there is a general understanding that obtaining a full encyclopedia of functions of the approximately 6000 genes is a worthwhile goal. The yeast literature comprises over 40,000 research papers, and the number of yeast researchers exceeds the number of gen...

    journal_title:Genetics

    pub_type: 杂志文章,评审

    doi:10.1534/genetics.107.074468

    authors: Peña-Castillo L,Hughes TR

    更新日期:2007-05-01 00:00:00

  • A complex array of DNA-binding proteins required for pairing-sensitive silencing by a polycomb group response element from the Drosophila engrailed gene.

    abstract::Regulatory DNA from the Drosophila gene engrailed causes silencing of a linked reporter gene (mini-white) in transgenic Drosophila. This silencing is strengthened in flies homozygous for the transgene and has been called "pairing-sensitive silencing." The pairing-sensitive silencing activities of a large fragment (2.6...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Americo J,Whiteley M,Brown JL,Fujioka M,Jaynes JB,Kassis JA

    更新日期:2002-04-01 00:00:00

  • Paramutation of the r1 locus of maize is associated with increased cytosine methylation.

    abstract::In paramutation two alleles of a gene interact so that one of the alleles is epigenetically silenced. The silenced state is then genetically transmissible for many generations. The large (220 kbp) multigenic complex R-r is paramutable: its level of expression is changed during paramutation. R-r was found to exhibit in...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Walker EL

    更新日期:1998-04-01 00:00:00