Cellular transcripts of chicken brain tissues in response to H5N1 and Newcastle disease virus infection.

Abstract:

BACKGROUND:Highly-pathogenic avian influenza (HPAI) H5N1 and Newcastle disease (ND) viruses are the two most important poultry viruses in the world, with the ability to cause classic central nervous system dysfunction in poultry and migratory birds. To elucidate the mechanisms of neurovirulence caused by these viruses, a preliminary study was design to analyze host's cellular responses during infections of these viruses. METHODS:An improved mRNA differential display technique (Gene Fishing™) was undertaken to analyze differentially expressed transcripts regulated during HPAI H5N1 and velogenic neurotropic NDV infections of whole brain of chickens. The identification of differentially expressed genes (DEGs) was made possible as this technique uses annealing control primers that generate reproducible, authentic and long PCR products that are detectable on agarose gels. RESULTS:Twenty-three genes were identified to be significantly regulated during infections with both viruses, where ten of the genes have been selected for validation using a TaqMan® based real time quantitative PCR assay. Some of the identified genes demonstrated to be key factors involving the cytoskeletal system, neural signal transduction and protein folding during stress. Interestingly, Septin 5, one of the genes isolated from HPAI H5N1-infected brain tissues has been reported to participate in the pathogenic process of Parkinson's disease. CONCLUSIONS:In this limited study, the differentially expressed genes of infected brain tissues regulated by the viruses were found not to be identical, thus suggesting that their neurovirulence and neuropathogenesis may not share similar mechanisms and pathways.

journal_name

Virol J

journal_title

Virology journal

authors

Balasubramaniam VR,Wai TH,Omar AR,Othman I,Hassan SS

doi

10.1186/1743-422X-9-53

subject

Has Abstract

pub_date

2012-02-23 00:00:00

pages

53

issn

1743-422X

pii

1743-422X-9-53

journal_volume

9

pub_type

杂志文章
  • Interactions of viruses in Cowpea: effects on growth and yield parameters.

    abstract::The study was carried out to investigate the effects of inoculating three cowpea cultivars: "OLO II", "OLOYIN" and IT86D-719 with three unrelated viruses: Cowpea aphid-borne mosaic virus (CABMV), genus Potyvirus, Cowpea mottle virus (CMeV), genus Carmovirus and Southern bean mosaic virus (SBMV), genus Sobemovirus sing...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-4-15

    authors: Kareem KT,Taiwo MA

    更新日期:2007-02-08 00:00:00

  • Inhibition of HIV early replication by the p53 and its downstream gene p21.

    abstract:BACKGROUND:The tumor suppressor gene p53 has been found to suppress HIV infection by various mechanisms, but the inhibition of HIV at an early stage of replication by host cell p53 and its downstream gene p21 has not been well studied. METHOD:VSV-G pseudotyped HIV-1 or HIV-2 viruses with GFP or luciferase reporter gen...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-018-0959-x

    authors: Shi B,Sharifi HJ,DiGrigoli S,Kinnetz M,Mellon K,Hu W,de Noronha CMC

    更新日期:2018-03-27 00:00:00

  • A VLP-based vaccine targeting domain III of the West Nile virus E protein protects from lethal infection in mice.

    abstract:BACKGROUND:Since its first appearance in the USA in 1999, West Nile virus (WNV) has spread in the Western hemisphere and continues to represent an important public health concern. In the absence of effective treatment, there is a medical need for the development of a safe and efficient vaccine. Live attenuated WNV vacc...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-7-146

    authors: Spohn G,Jennings GT,Martina BE,Keller I,Beck M,Pumpens P,Osterhaus AD,Bachmann MF

    更新日期:2010-07-06 00:00:00

  • Agnoprotein of polyomavirus BK interacts with proliferating cell nuclear antigen and inhibits DNA replication.

    abstract:BACKGROUND:The human polyomavirus BK expresses a 66 amino-acid peptide referred to as agnoprotein. Though mutants lacking agnoprotein are severely reduced in producing infectious virions, the exact function of this peptide remains incompletely understood. To elucidate the function of agnoprotein, we searched for novel ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-014-0220-1

    authors: Gerits N,Johannessen M,Tümmler C,Walquist M,Kostenko S,Snapkov I,van Loon B,Ferrari E,Hübscher U,Moens U

    更新日期:2015-02-01 00:00:00

  • Could FIV zoonosis responsible of the breakdown of the pathocenosis which has reduced the European CCR5-Delta32 allele frequencies?

    abstract:BACKGROUND:In Europe, the north-south downhill cline frequency of the chemokine receptor CCR5 allele with a 32-bp deletion (CCR5-Delta32) raises interesting questions for evolutionary biologists. We had suggested first that, in the past, the European colonizers, principally Romans, might have been instrumental of a pro...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-5-119

    authors: Faure E

    更新日期:2008-10-16 00:00:00

  • Crystal structure of the fibre head domain of bovine adenovirus 4, a ruminant atadenovirus.

    abstract:BACKGROUND:In adenoviruses, primary host cell recognition is generally performed by the head domains of their homo-trimeric fibre proteins. This first interaction is reversible. A secondary, irreversible interaction subsequently takes place via other adenovirus capsid proteins and leads to a productive infection. Altho...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-015-0309-1

    authors: Nguyen TH,Vidovszky MZ,Ballmann MZ,Sanz-Gaitero M,Singh AK,Harrach B,Benkő M,van Raaij MJ

    更新日期:2015-05-22 00:00:00

  • Analysis of coevolution in nonstructural proteins of chikungunya virus.

    abstract:BACKGROUND:RNA viruses are characterized by high rate of mutations mainly due to the lack of proofreading repair activities associated with its RNA-dependent RNA-polymerase (RdRp). In case of arboviruses, this phenomenon has lead to the existence of mixed population of genomic variants within the host called quasi-spec...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-016-0543-1

    authors: Jain J,Mathur K,Shrinet J,Bhatnagar RK,Sunil S

    更新日期:2016-06-02 00:00:00

  • Epidemic strain YC2014 of porcine epidemic diarrhea virus could provide piglets against homologous challenge.

    abstract:BACKGROUND:Porcine epidemic diarrhea virus (PEDV) is the main causative agent of porcine epidemic diarrhea (PED). Since December 2010, a large-scale outbreak of diarrhea has been observed in swine farms in China. Accumulated evidence indicates that this large-scale outbreak of diarrhea were caused by highly virulent PE...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-016-0529-z

    authors: Lin H,Chen L,Gao L,Yuan X,Ma Z,Fan H

    更新日期:2016-04-22 00:00:00

  • Identification of two internal signal peptide sequences: critical for classical swine fever virus non-structural protein 2 to trans-localize to the endoplasmic reticulum.

    abstract:BACKGROUND:The membrane topology and molecular mechanisms for endoplasmic reticulum (ER) localization of classical swine fever virus (CSFV) non-structural 2 (NS2) protien is unclear. We attempted to elucidate the subcellular localization, and the molecular mechanisms responsible for the localization of this protein in ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-236

    authors: Guo KK,Tang QH,Zhang YM,Kang K,He L

    更新日期:2011-05-18 00:00:00

  • First confirmation of imported dengue virus serotype 2 complete genome in urine from a Chinese traveler returning from India.

    abstract::Dengue virus (DENV) is a mosquito-borne virus that has four serotypes. Collection of serum from patients is time- and labor- consuming, and presents a high injury risk for infants and children. The genomic and serological diagnosis of imported dengue fever from a urine sample was used as a non-invasive diagnostic meth...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-11-56

    authors: Ma X,Zhen W,Yang P,Sun X,Nie W,Zhang L,Xu H,Hu K

    更新日期:2014-03-25 00:00:00

  • Positive selection on hemagglutinin and neuraminidase genes of H1N1 influenza viruses.

    abstract:BACKGROUND:Since its emergence in March 2009, the pandemic 2009 H1N1 influenza A virus has posed a serious threat to public health. To trace the evolutionary path of these new pathogens, we performed a selection-pressure analysis of a large number of hemagglutinin (HA) and neuraminidase (NA) gene sequences of H1N1 infl...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-183

    authors: Li W,Shi W,Qiao H,Ho SY,Luo A,Zhang Y,Zhu C

    更新日期:2011-04-21 00:00:00

  • Simultaneous detection and differentiation of Rice black streaked dwarf virus (RBSDV) and Southern rice black streaked dwarf virus (SRBSDV) by duplex real time RT-PCR.

    abstract:BACKGROUND:The diseases caused by Rice black streaked dwarf virus (RBSDV) and Southern rice black streaked dwarf virus (SRBSDV) have been occurring epidemically in China and southeastern Asia in recent years. A sensitive, reliable and quantitative method is required to detect and distinguish for RBSDV and SRBSDV in ric...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-10-24

    authors: Zhang P,Mar TT,Liu W,Li L,Wang X

    更新日期:2013-01-18 00:00:00

  • In vitro inhibition of mumps virus by retinoids.

    abstract:BACKGROUND:Mumps virus (MuV) is a highly infectious paramyxovirus closely related to measles virus (MeV). Despite the availability of a mumps vaccine, outbreaks continue to occur and no treatment options are available. Vitamin A and other naturally occurring retinoids inhibit the replication of MeV in vitro. METHODS:A...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-10-337

    authors: Soye KJ,Trottier C,Di Lenardo TZ,Restori KH,Reichman L,Miller WH Jr,Ward BJ

    更新日期:2013-11-14 00:00:00

  • Detection and genetic characterization of canine astroviruses in pet dogs in Guangxi, China.

    abstract:BACKGROUND:Astroviruses (AstVs) have been reported to infect and cause gastroenteritis in most animal species. Human AstVs were regarded the causative agent of viral diarrhea in children. In dogs, little is known about the epidemiology and clinical significance of AstV infection. FINDINGS:In this study, we collected a...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-017-0823-4

    authors: Zhou H,Liu L,Li R,Qin Y,Fang Q,Balasubramaniam VR,Wang G,Wei Z,Ouyang K,Huang W,Chen Y

    更新日期:2017-08-17 00:00:00

  • Transmission of H7N9 influenza virus in mice by different infective routes.

    abstract:BACKGROUND:On 19 February 2013, the first patient infected with a novel influenza A H7N9 virus from an avian source showed symptoms of sickness. More than 349 laboratory-confirmed cases and 109 deaths have been reported in mainland China since then. Laboratory-confirmed, human-to-human H7N9 virus transmission has not b...

    journal_title:Virology journal

    pub_type: 历史文章,杂志文章

    doi:10.1186/1743-422X-11-185

    authors: Bao L,Xu L,Zhu H,Deng W,Chen T,Lv Q,Li F,Yuan J,Xu Y,Huang L,Li Y,Liu J,Yao Y,Yu P,Chen H,Qin C

    更新日期:2014-11-03 00:00:00

  • Expression of Ebolavirus glycoprotein on the target cells enhances viral entry.

    abstract:BACKGROUND:Entry of Ebolavirus to the target cells is mediated by the viral glycoprotein GP. The native GP exists as a homotrimer on the virions and contains two subunits, a surface subunit (GP1) that is involved in receptor binding and a transmembrane subunit (GP2) that mediates the virus-host membrane fusion. Previou...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-6-75

    authors: Manicassamy B,Rong L

    更新日期:2009-06-08 00:00:00

  • Duck enteritis virus UL54 is an IE protein primarily located in the nucleus.

    abstract:BACKGROUND:The UL54 protein of Duck Enteritis Virus (DEV) is a homolog of herpes simplex virus-1 (HSV-1) immediate-early infectious cell protein 27 (ICP27), a multifunctional protein essential for viral infection. Nonetheless, there is little information on the UL54 protein of DEV. METHODS:The UL54 gene was cloned int...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-015-0424-z

    authors: Liu C,Cheng A,Wang M,Chen S,Jia R,Zhu D,Liu M,Sun K,Yang Q,Chen X

    更新日期:2015-11-25 00:00:00

  • Analysis of the 5'UTR of HCV genotype 3 grown in vitro in human B cells, T cells, and macrophages.

    abstract:BACKGROUND:Previously, we have reported the isolation and molecular characterization of human Hepatitis C virus genotype 1 (HCV-1) from infected patients. We are now reporting an analysis of HCV obtained from patients infected with HCV genotype 3 (HCV-3) as diagnosed by clinical laboratories. RESULTS:HCV was cultured ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-7-155

    authors: Revie D,Alberti MO,Prichard JG,Kelley AS,Salahuddin SZ

    更新日期:2010-07-13 00:00:00

  • Reverse genetic characterization of the natural genomic deletion in SARS-Coronavirus strain Frankfurt-1 open reading frame 7b reveals an attenuating function of the 7b protein in-vitro and in-vivo.

    abstract::During the outbreak of SARS in 2002/3, a prototype virus was isolated from a patient in Frankfurt/Germany (strain Frankfurt-1). As opposed to all other SARS-Coronavirus strains, Frankfurt-1 has a 45-nucleotide deletion in the transmembrane domain of its ORF 7b protein. When over-expressed in HEK 293 cells, the full-le...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-6-131

    authors: Pfefferle S,Krähling V,Ditt V,Grywna K,Mühlberger E,Drosten C

    更新日期:2009-08-24 00:00:00

  • Sampling variability between two mid-turbinate swabs of the same patient has implications for influenza viral load monitoring.

    abstract:BACKGROUND:With the clinical development of several antiviral intervention strategies for influenza, it becomes crucial to explore viral load shedding in the nasal cavity as a biomarker for treatment success, but also to explore sampling strategies for sensible and reliable virus collection. FINDINGS:In this study, 24...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-014-0233-9

    authors: Van Wesenbeeck L,Meeuws H,D'Haese D,Ispas G,Houspie L,Van Ranst M,Stuyver LJ

    更新日期:2014-12-24 00:00:00

  • Study on suitable analysis method for HIV-1 non-catalytic integrase inhibitor.

    abstract:BACKGROUND:Integrase (IN) is an essential protein for HIV replication that catalyzes insertion of the reverse-transcribed viral genome into the host chromosome during the early steps of viral infection. Highly active anti-retroviral therapy is a HIV/AIDS treatment method that combines three or more antiviral drugs ofte...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-020-01476-x

    authors: Park KH,Kim M,Bae SE,Lee HJ,Kim KC,Choi BS,Kim YB

    更新日期:2021-01-13 00:00:00

  • Human platelets express CAR with localization at the sites of intercellular interaction.

    abstract::Adenovirus has a wide tissue tropism. The virus attaches to the surface of cells via the fiber protein knob binding to the Coxsackie and Adenovirus receptor known as CAR. Virus entry inside cells is facilitated by integrins αVβ3 and αVβ5. Mice platelets are shown to be the predominant Ad binding blood cell type and th...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-456

    authors: Gupalo E,Buriachkovskaia L,Othman M

    更新日期:2011-09-30 00:00:00

  • Simultaneous detection of novel H7N9 and other influenza A viruses in poultry by multiplex real-time RT-PCR.

    abstract:BACKGROUND:A novel reassortant H7N9 influenza A virus has crossed the species barrier from poultry to cause human infections in China in 2013 and 2014. Rapid detection of the novel H7N9 virus is important to detect this virus in poultry and reduce the risk of an epidemic in birds or humans. FINDINGS:In this study, a m...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-015-0300-x

    authors: Xu X,Bao H,Ma Y,Sun J,Zhao Y,Wang Y,Shi J,Zeng X,Li Y,Wang X,Chen H

    更新日期:2015-04-30 00:00:00

  • Avian influenza virus H5N1 induces rapid interferon-beta production but shows more potent inhibition to retinoic acid-inducible gene I expression than H1N1 in vitro.

    abstract:BACKGROUND:The mechanisms through which the avian influenza virus H5N1 modulate the host's innate immune defense during invasion, remains incompletely understood. RIG-I as a pattern recognition receptor plays an important role in mediating innate immune response induced by influenza virus. So, modulating RIG-I might be...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-9-145

    authors: Mi Z,Ma Y,Tong Y

    更新日期:2012-08-03 00:00:00

  • Intramuscular immunization of mice with live influenza virus is more immunogenic and offers greater protection than immunization with inactivated virus.

    abstract:BACKGROUND:Influenza virus continues to cause significant hospitalization rates in infants and young children. A 2-dose regime of trivalent inactivated vaccine is required to generate protective levels of hemagglutination inhibiting (HAI) antibodies. A vaccine preparation with enhanced immunogenicity is therefore desir...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-251

    authors: Harris K,Ream R,Gao J,Eichelberger MC

    更新日期:2011-05-21 00:00:00

  • HHV-6A in vitro infection of thyrocytes and T cells alters the expression of miRNA associated to autoimmune thyroiditis.

    abstract:BACKGROUND:Human herpesviruses have been hypothesized as environmental triggers in the development of autoimmune thyroid diseases (AITD), and in particular active human herpesvirus 6A (HHV-6A) infection was detected in thyrocytes of Hashimoto's thyroiditis (HT) patients, who also show specific anti-viral immune respons...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-016-0672-6

    authors: Caselli E,D'Accolti M,Soffritti I,Zatelli MC,Rossi R,Degli Uberti E,Di Luca D

    更新日期:2017-01-11 00:00:00

  • Genomic and phylogenetic characterization of ChPV2, a novel goat PV closely related to the Xi-PV1 species infecting bovines.

    abstract:BACKGROUND:Papillomaviruses (PVs) infecting artiodactyls are very diverse, and only second in number to PVs infecting primates. PVs associated to lesions in economically important ruminant species have been isolated from cattle and sheep. METHODS:Potential PV DNA from teat lesions of a Damascus goat was isolated, clon...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-020-01440-9

    authors: Willemsen A,van den Boom A,Dietz J,Bilge Dagalp S,Dogan F,Bravo IG,Ehrhardt A,Ehrke-Schulz E

    更新日期:2020-10-30 00:00:00

  • A novel coronavirus capable of lethal human infections: an emerging picture.

    abstract::In September 2012, a novel coronavirus was isolated from a patient in Saudi Arabia who had died of an acute respiratory illness and renal failure. The clinical presentation was reminiscent of the outbreak caused by the SARS-coronavirus (SARS-CoV) exactly ten years ago that resulted in over 8000 cases. Sequence analysi...

    journal_title:Virology journal

    pub_type: 杂志文章,评审

    doi:10.1186/1743-422X-10-66

    authors: Khan G

    更新日期:2013-02-28 00:00:00

  • De novo transcriptomic assembly and mRNA expression patterns of Botryosphaeria dothidea infection with mycoviruses chrysovirus 1 (BdCV1) and partitivirus 1 (BdPV1).

    abstract:BACKGROUND:Pear ring rot, caused by Botryosphaeria species, is responsible for substantial economic losses by causing severe recession of pear tree growth in China. Mycovirus-mediated hypovirulence in plant pathogenic fungi is a crucial biological method to control fungal diseases. METHODS:We conducted a large-scale a...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-018-1033-4

    authors: Wang L,Luo H,Hu W,Yang Y,Hong N,Wang G,Wang A,Wang L

    更新日期:2018-08-13 00:00:00

  • Antiviral activity of Piscidin 1 against pseudorabies virus both in vitro and in vivo.

    abstract:BACKGROUND:Swine-origin virus infection spreading widely could cause significant economic loss to porcine industry. Novel antiviral agents need to be developed to control this situation. METHODS:In this study, we evaluated the activities of five broad-spectrum antimicrobial peptides (AMPs) against several important sw...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-019-1199-4

    authors: Hu H,Guo N,Chen S,Guo X,Liu X,Ye S,Chai Q,Wang Y,Liu B,He Q

    更新日期:2019-07-31 00:00:00